FFCP PHASE1:Mm9::chr8:98226947..98226963,+: Difference between revisions
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{{FFCP|EntrezGene=234593|HGNC=|MCL_coexpression_id=1|UniProt=Q8BTG7|association_with_transcript=0bp_to_ENSMUST00000080666_5end|description=CAGE_peak_1_at_Ndrg4_5end|id=chr8:98226947..98226963,+|ontology_enrichment_celltype=CL:0000393!1.17e-09!39;CL:0000211!1.17e-09!39;CL:0000117!2.41e-09!23;CL:0000337!2.41e-09!23;CL:0000540!2.51e-09!33;CL:0000047!2.51e-09!33;CL:0000031!2.51e-09!33;CL:0000404!2.51e-09!33;CL:0000221!4.02e-09!44;CL:0000133!4.02e-09!44;CL:0000055!7.21e-09!50;CL:0002319!7.37e-09!43|ontology_enrichment_celltype_v019_2=CL:0000393,9.99e-10,39;CL:0000211,9.99e-10,39;CL:0000117,2.08e-09,23;CL:0000337,2.08e-09,23;CL:0000540,2.16e-09,33;CL:0000047,2.16e-09,33;CL:0000031,2.16e-09,33;CL:0000404,2.16e-09,33;CL:0000221,3.48e-09,44;CL:0000133,3.48e-09,44;CL:0002319,6.40e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.47e-22!75;UBERON:0001016!2.47e-22!75;UBERON:0001017!2.65e-22!73;UBERON:0005743!2.65e-22!73;UBERON:0004121!7.50e-22!102;UBERON:0000924!7.50e-22!102;UBERON:0006601!7.50e-22!102;UBERON:0002346!1.40e-19!71;UBERON:0003075!1.40e-19!71;UBERON:0007284!1.40e-19!71;UBERON:0000033!8.65e-19!63;UBERON:0001049!3.62e-18!52;UBERON:0005068!3.62e-18!52;UBERON:0006241!3.62e-18!52;UBERON:0007135!3.62e-18!52;UBERON:0000955!2.02e-17!50;UBERON:0006238!2.02e-17!50;UBERON:0002616!9.11e-17!49;UBERON:0002020!2.69e-14!34;UBERON:0003056!3.05e-14!49;UBERON:0003080!1.01e-12!40;UBERON:0002780!4.24e-12!39;UBERON:0001890!4.24e-12!39;UBERON:0006240!4.24e-12!39;UBERON:0002791!8.11e-12!29;UBERON:0003528!8.11e-12!29;UBERON:0001893!8.11e-12!29;UBERON:0004111!6.85e-11!122;UBERON:0000025!2.47e-10!114;UBERON:0007100!3.09e-08!18;UBERON:0000948!3.09e-08!18;UBERON:0005498!3.09e-08!18;UBERON:0004140!3.09e-08!18;UBERON:0009881!3.09e-08!18;UBERON:0004141!3.09e-08!18;UBERON:0003084!3.09e-08!18;UBERON:0007005!3.09e-08!18;UBERON:0004139!3.09e-08!18;UBERON:0004291!3.09e-08!18;UBERON:0000956!6.18e-08!21;UBERON:0001869!6.18e-08!21;UBERON:0000203!6.18e-08!21;UBERON:0007811!1.41e-07!86;UBERON:0002619!1.85e-07!17;UBERON:0002021!2.75e-07!10;UBERON:0000411!2.75e-07!10;UBERON:0001950!2.75e-07!10;UBERON:0004535!3.86e-07!23;UBERON:0001009!3.86e-07!23;UBERON:0000468!5.02e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.47e-29,92;UBERON:0001016,1.66e-22,75;UBERON:0001017,1.78e-22,73;UBERON:0004121,3.01e-22,95;UBERON:0000924,3.01e-22,95;UBERON:0006601,3.01e-22,95;UBERON:0002346,1.96e-20,64;UBERON:0003075,1.96e-20,64;UBERON:0007284,1.96e-20,64;UBERON:0000073,1.53e-19,54;UBERON:0010371,3.67e-19,73;UBERON:0001049,2.62e-18,52;UBERON:0005068,2.62e-18,52;UBERON:0006241,2.62e-18,52;UBERON:0007135,2.62e-18,52;UBERON:0000955,1.06e-15,47;UBERON:0006238,1.06e-15,47;UBERON:0002616,4.66e-15,46;UBERON:0002020,2.10e-14,34;UBERON:0003056,2.39e-14,49;UBERON:0003080,8.13e-13,40;UBERON:0002780,3.46e-12,39;UBERON:0001890,3.46e-12,39;UBERON:0006240,3.46e-12,39;UBERON:0003528,6.66e-12,29;UBERON:0002791,6.66e-12,29;UBERON:0001893,6.66e-12,29;UBERON:0004111,2.00e-10,122;UBERON:0000025,7.18e-10,114;UBERON:0007100,2.71e-08,18;UBERON:0000948,2.71e-08,18;UBERON:0005498,2.71e-08,18;UBERON:0004140,2.71e-08,18;UBERON:0009881,2.71e-08,18;UBERON:0004141,2.71e-08,18;UBERON:0003084,2.71e-08,18;UBERON:0007005,2.71e-08,18;UBERON:0004139,2.71e-08,18;UBERON:0004291,2.71e-08,18;UBERON:0000956,5.46e-08,21;UBERON:0001869,5.46e-08,21;UBERON:0000203,5.46e-08,21;UBERON:0002619,1.65e-07,17;UBERON:0002021,2.46e-07,10;UBERON:0000411,2.46e-07,10;UBERON:0001950,2.46e-07,10;UBERON:0004535,3.46e-07,23;UBERON:0001009,3.46e-07,23|phase1_expression=25.9441132309766,0.348975407639361,0,0,0,0.671517087647559,0.467225281191051,0.258246646883153,1.54867594366833,0.936258105287974,0,0.0797721589953364,0,0,0,0,0,0,0,0.42438965179803,182.758030534649,0.0992909512008853,0,0,0,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.221730510655305,1.27006134691926,0,0,0,0.166234645358492,0,0,0,0,0,0,0,20.0175940581168,17.0313244448784,11.5634453861859,10.9534788208725,13.0815093828268,11.8630538676615,6.41618666945135,12.3188051030319,8.62515386189829,0,0.725362142011344,0.336093799142464,12.6057123657614,24.3553423947943,27.3306208907044,77.8918374309451,98.9213131238701,75.4259370172353,19.6529828600097,11.5608323494448,3.1496490104849,3.9554654502679,6.3943210345149,21.5712079573251,14.9845139075406,14.101787273953,17.1457541681247,16.6156719467592,462.754594734162,403.305955777646,22.7832886539815,21.3735400370667,22.9804696652505,560.489834286888,896.748175372273,825.17429665254,82.5608161191013,93.6833470488675,69.2814782840491,914.045138730521,532.373429089969,638.085482715959,303.467443037878,284.458618236608,131.411609306837,8.63278603998298,27.5080478788699,2.6087803983151,1.72084775396277,0,1.07940638327563,0,0,45.3635477025558,10.5666799998396,10.1316541795119,8.48014978824817,33.8024207464033,10.2661181931454,2.54805239706646,7.11066703153331,0.865964164044856,0.760079596425296,0.505524445014783,24.5495341395979,0.2589378836471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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=234593 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BTG7 | |||
|association_with_transcript=0bp_to_ENSMUST00000080666_5end | |||
|cluster_id=chr8:98226947..98226963,+ | |||
|description=CAGE_peak_1_at_Ndrg4_5end | |||
|id=chr8:98226947..98226963,+ | |||
|ontology_enrichment_celltype=CL:0000393!1.17e-09!39;CL:0000211!1.17e-09!39;CL:0000117!2.41e-09!23;CL:0000337!2.41e-09!23;CL:0000540!2.51e-09!33;CL:0000047!2.51e-09!33;CL:0000031!2.51e-09!33;CL:0000404!2.51e-09!33;CL:0000221!4.02e-09!44;CL:0000133!4.02e-09!44;CL:0000055!7.21e-09!50;CL:0002319!7.37e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.99e-10,39;CL:0000211,9.99e-10,39;CL:0000117,2.08e-09,23;CL:0000337,2.08e-09,23;CL:0000540,2.16e-09,33;CL:0000047,2.16e-09,33;CL:0000031,2.16e-09,33;CL:0000404,2.16e-09,33;CL:0000221,3.48e-09,44;CL:0000133,3.48e-09,44;CL:0002319,6.40e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.47e-22!75;UBERON:0001016!2.47e-22!75;UBERON:0001017!2.65e-22!73;UBERON:0005743!2.65e-22!73;UBERON:0004121!7.50e-22!102;UBERON:0000924!7.50e-22!102;UBERON:0006601!7.50e-22!102;UBERON:0002346!1.40e-19!71;UBERON:0003075!1.40e-19!71;UBERON:0007284!1.40e-19!71;UBERON:0000033!8.65e-19!63;UBERON:0001049!3.62e-18!52;UBERON:0005068!3.62e-18!52;UBERON:0006241!3.62e-18!52;UBERON:0007135!3.62e-18!52;UBERON:0000955!2.02e-17!50;UBERON:0006238!2.02e-17!50;UBERON:0002616!9.11e-17!49;UBERON:0002020!2.69e-14!34;UBERON:0003056!3.05e-14!49;UBERON:0003080!1.01e-12!40;UBERON:0002780!4.24e-12!39;UBERON:0001890!4.24e-12!39;UBERON:0006240!4.24e-12!39;UBERON:0002791!8.11e-12!29;UBERON:0003528!8.11e-12!29;UBERON:0001893!8.11e-12!29;UBERON:0004111!6.85e-11!122;UBERON:0000025!2.47e-10!114;UBERON:0007100!3.09e-08!18;UBERON:0000948!3.09e-08!18;UBERON:0005498!3.09e-08!18;UBERON:0004140!3.09e-08!18;UBERON:0009881!3.09e-08!18;UBERON:0004141!3.09e-08!18;UBERON:0003084!3.09e-08!18;UBERON:0007005!3.09e-08!18;UBERON:0004139!3.09e-08!18;UBERON:0004291!3.09e-08!18;UBERON:0000956!6.18e-08!21;UBERON:0001869!6.18e-08!21;UBERON:0000203!6.18e-08!21;UBERON:0007811!1.41e-07!86;UBERON:0002619!1.85e-07!17;UBERON:0002021!2.75e-07!10;UBERON:0000411!2.75e-07!10;UBERON:0001950!2.75e-07!10;UBERON:0004535!3.86e-07!23;UBERON:0001009!3.86e-07!23;UBERON:0000468!5.02e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.47e-29,92;UBERON:0001016,1.66e-22,75;UBERON:0001017,1.78e-22,73;UBERON:0004121,3.01e-22,95;UBERON:0000924,3.01e-22,95;UBERON:0006601,3.01e-22,95;UBERON:0002346,1.96e-20,64;UBERON:0003075,1.96e-20,64;UBERON:0007284,1.96e-20,64;UBERON:0000073,1.53e-19,54;UBERON:0010371,3.67e-19,73;UBERON:0001049,2.62e-18,52;UBERON:0005068,2.62e-18,52;UBERON:0006241,2.62e-18,52;UBERON:0007135,2.62e-18,52;UBERON:0000955,1.06e-15,47;UBERON:0006238,1.06e-15,47;UBERON:0002616,4.66e-15,46;UBERON:0002020,2.10e-14,34;UBERON:0003056,2.39e-14,49;UBERON:0003080,8.13e-13,40;UBERON:0002780,3.46e-12,39;UBERON:0001890,3.46e-12,39;UBERON:0006240,3.46e-12,39;UBERON:0003528,6.66e-12,29;UBERON:0002791,6.66e-12,29;UBERON:0001893,6.66e-12,29;UBERON:0004111,2.00e-10,122;UBERON:0000025,7.18e-10,114;UBERON:0007100,2.71e-08,18;UBERON:0000948,2.71e-08,18;UBERON:0005498,2.71e-08,18;UBERON:0004140,2.71e-08,18;UBERON:0009881,2.71e-08,18;UBERON:0004141,2.71e-08,18;UBERON:0003084,2.71e-08,18;UBERON:0007005,2.71e-08,18;UBERON:0004139,2.71e-08,18;UBERON:0004291,2.71e-08,18;UBERON:0000956,5.46e-08,21;UBERON:0001869,5.46e-08,21;UBERON:0000203,5.46e-08,21;UBERON:0002619,1.65e-07,17;UBERON:0002021,2.46e-07,10;UBERON:0000411,2.46e-07,10;UBERON:0001950,2.46e-07,10;UBERON:0004535,3.46e-07,23;UBERON:0001009,3.46e-07,23 | |||
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| |||
|short_description=p1@Ndrg4 | |||
}} |
Latest revision as of 01:08, 26 September 2015
Short description: | p1@Ndrg4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ndrg4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000080666_5end |
EntrezGene: | Ndrg4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.99e-10 | 39 |
electrically active cell | 9.99e-10 | 39 |
CNS neuron (sensu Vertebrata) | 2.08e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.08e-09 | 23 |
neuron | 2.16e-09 | 33 |
neuronal stem cell | 2.16e-09 | 33 |
neuroblast | 2.16e-09 | 33 |
electrically signaling cell | 2.16e-09 | 33 |
ectodermal cell | 3.48e-09 | 44 |
neurectodermal cell | 3.48e-09 | 44 |
neural cell | 6.40e-09 | 43 |