FFCP PHASE1:Mm9::chr11:28484260..28484309,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:28484260..28484309,-
|short_description=p1@Ccdc85a
|description=CAGE_peak_1_at_Ccdc85a_5end
|association_with_transcript=0bp_to_ENSMUST00000093253,ENSMUST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=216613 | |EntrezGene=216613 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SP85 | |UniProt=Q5SP85 | ||
|association_with_transcript=0bp_to_ENSMUST00000093253,ENSMUST00000109501,ENSMUST00000109502,NM_001166661,NM_001166662,NM_181577,uc007igk.2,uc007igl.2,uc007igm.1_5end | |||
|cluster_id=chr11:28484260..28484309,- | |||
|description=CAGE_peak_1_at_Ccdc85a_5end | |||
|id=chr11:28484260..28484309,- | |||
|ontology_enrichment_celltype=CL:0000540!2.29e-12!33;CL:0000047!2.29e-12!33;CL:0000031!2.29e-12!33;CL:0000404!2.29e-12!33;CL:0000221!3.43e-11!44;CL:0000133!3.43e-11!44;CL:0002319!4.48e-11!43;CL:0000117!8.60e-11!23;CL:0000337!8.60e-11!23;CL:0000393!9.30e-11!39;CL:0000211!9.30e-11!39;CL:0000055!2.57e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.47e-13,33;CL:0000047,1.47e-13,33;CL:0000031,1.47e-13,33;CL:0000404,1.47e-13,33;CL:0000117,2.66e-12,23;CL:0000337,2.66e-12,23;CL:0000221,1.14e-11,44;CL:0000133,1.14e-11,44;CL:0000393,1.41e-11,39;CL:0000211,1.41e-11,39;CL:0002319,1.57e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.98e-29!73;UBERON:0005743!6.98e-29!73;UBERON:0000073!5.91e-28!75;UBERON:0001016!5.91e-28!75;UBERON:0004121!2.20e-26!102;UBERON:0000924!2.20e-26!102;UBERON:0006601!2.20e-26!102;UBERON:0002346!5.59e-23!71;UBERON:0003075!5.59e-23!71;UBERON:0007284!5.59e-23!71;UBERON:0001049!1.35e-22!52;UBERON:0005068!1.35e-22!52;UBERON:0006241!1.35e-22!52;UBERON:0007135!1.35e-22!52;UBERON:0000033!2.21e-22!63;UBERON:0000955!1.37e-21!50;UBERON:0006238!1.37e-21!50;UBERON:0002616!4.95e-21!49;UBERON:0003056!5.64e-19!49;UBERON:0003080!5.98e-18!40;UBERON:0002780!3.10e-17!39;UBERON:0001890!3.10e-17!39;UBERON:0006240!3.10e-17!39;UBERON:0002020!5.17e-17!34;UBERON:0002791!4.92e-14!29;UBERON:0003528!4.92e-14!29;UBERON:0001893!4.92e-14!29;UBERON:0000025!8.75e-12!114;UBERON:0004111!2.72e-11!122;UBERON:0007811!1.55e-10!86;UBERON:0000956!1.12e-09!21;UBERON:0001869!1.12e-09!21;UBERON:0000203!1.12e-09!21;UBERON:0002619!1.60e-09!17;UBERON:0000153!3.76e-09!94;UBERON:0000468!1.52e-08!333;UBERON:0002021!6.37e-08!10;UBERON:0000411!6.37e-08!10;UBERON:0001950!6.37e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.44e-32,73;UBERON:0001016,8.04e-31,75;UBERON:0004121,3.46e-29,95;UBERON:0000924,3.46e-29,95;UBERON:0006601,3.46e-29,95;UBERON:0002346,6.77e-29,64;UBERON:0003075,6.77e-29,64;UBERON:0007284,6.77e-29,64;UBERON:0000073,2.69e-28,54;UBERON:0001049,2.18e-26,52;UBERON:0005068,2.18e-26,52;UBERON:0006241,2.18e-26,52;UBERON:0007135,2.18e-26,52;UBERON:0010371,6.36e-25,73;UBERON:0010314,4.38e-23,92;UBERON:0000955,1.05e-22,47;UBERON:0006238,1.05e-22,47;UBERON:0002616,4.54e-22,46;UBERON:0003056,7.91e-22,49;UBERON:0003080,1.24e-20,40;UBERON:0002780,8.42e-20,39;UBERON:0001890,8.42e-20,39;UBERON:0006240,8.42e-20,39;UBERON:0002020,1.53e-19,34;UBERON:0003528,4.49e-16,29;UBERON:0002791,4.49e-16,29;UBERON:0001893,4.49e-16,29;UBERON:0000025,1.56e-13,114;UBERON:0004111,1.60e-12,122;UBERON:0000956,5.27e-11,21;UBERON:0001869,5.27e-11,21;UBERON:0000203,5.27e-11,21;UBERON:0002619,7.99e-11,17;UBERON:0002021,5.77e-09,10;UBERON:0000411,5.77e-09,10;UBERON:0001950,5.77e-09,10 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.33424243480484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.33166941804883,2.20256102594018,0,4.14247797122848,3.51497892375155,6.02732687130279,1.81982348112971,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,13.7575193384526,21.1596391708813,17.1134478946668,1.35537812827653,0,0,0,0,0.599200221036809,1.53687322128622,1.34796496001021,2.29510095163874,1.47227472945967,18.852964970651,17.2277461942259,3.42974237801871,1.82106394934649,5.51531271966013,33.0347642998166,26.9420283359746,26.5739302533301,14.1118327871307,15.2784364816024,15.6274011167028,19.2636269310953,23.6360296213306,22.7669389187447,24.7488011797881,22.9218406086556,18.6399445825301,0.151452386666368,0.982430281388212,0.289864488701678,0,0,0,0,0,1.96622188184453,0,0,0,2.67602497575693,0,0,0,0,0,0,2.51204535381932,0.517875767294343,3.41416919849097,0.346970653532272,0.304465478312141,0.230615497256059,1.20578112442098,1.88141931417128,1.0053327306374,2.22475470960936,3.61498392299779,0,1.61766849947409,2.65009822152472,1.93950101254089,0,5.5628351432194,4.1889341362691,0.255457055208591,0,0,0,28.9095934051308,19.6725259212009,10.0523481690292,21.7280400240346,28.640131220997,24.5189892580281,24.8229132493669,0.81471491080253,1.61729061793121,0.252722758433675,1.26265113531884,2.08192708740326,2.06911893990126,3.60124259610698,3.0140963567143,3.6739709541717,3.45907044769094,3.74806898238915,6.72628763921441,0.215567992932842,0.567318240503458,0.527853372491847,0.657587197282725,0,0.696504333044333,0.61734640922383,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0,0.473489471170421,0.983821158737019,0.462801338662135,0.697601834251224,1.87791380979733,3.61972561338225,1.6455984991348,4.92502392237286,7.05298643048945,7.30999937126662,3.73235195994786,7.91817870686193,33.015521924568,8.43817821510132,0,0.528901133327089,0.853153002140936,2.09013004674395,0.38660238396628,0.605050573870028,0.667134131534611,0.190225626112559,0,0.164698954724011,1.00534083520108,0.397912944082302,0.19496408711912,0,0.432276099749388,0.597423819763102,0.569003702859245,0.799739588268102,1.1270773567308,0.610953983535943,0.969762435838129,2.17421041659988,1.07502113111237,1.03327103585722,0.627994911365499,1.23397163921801,0,0.333690211432188,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,7.39012760666419,0,0.977789858652155,1.69745085775188,3.75504397261603,3.68513766371995,9.28370199455454,9.75668239288994,5.51723004371669,7.0868700687608,8.45110273884682,12.6174752331118,9.67035898449015,14.8988530338957,0,0,0.491764273019036,1.10374698521893,16.215609588767,20.6292568402278,0,7.57412781613119,5.36363973007636,4.68526493155966,3.66219776145758,0.955875191810208,2.45078541490634,1.13230612315533,7.69140333182299,6.13737301613755,7.90575555893047,14.4594592389813,0.99358059645788,0.35613120733451,0.81443479676788,0.989820737835213,0,0.485561272309963,0.302323556964751,0.377210159511796,1.77181135728464,1.84461088766356,0.775284879504663,1.45413491791002,1.42598951353889,0.948110273807448,1.05418608574999,1.03135543248187,4.08527526904546,1.8006109403131,1.94038025674132,4.07240366560025,7.09360934569094,6.95638388648075,8.22745103010605,5.48036908406279,0,0.21183207086382,0.220528398054962,0.32977250588296,1.77610869365496,0.180938774784468,0.716234064018819,0.656563598980245,0.582961673259701,15.0194494628513,0,1.03193433981611,0.555583582109135,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.627264888043406,1.09181281873089,0.404593039154462,0.826534557253359,1.30877970992015,0.518459893167171,0,0,0.299033092087958,0.330916980914195,0.388902376688095,0.645799117388655,0.506868376472335,0.58678619322877,0.2604087696879,0.314578033277133,0,0.576060012515731,0.316011120628178,0.608175645870493,0.410843828659309,0.649604114888975,0,0.596044064343795,0.120195449519969,0.443068581523732,0.403865799792591,0.15241361331,0.100826185136841,0.292373642219257,0.192423683280659,0.116876902181569,5.8949899739955,0,0,0,0.772758376128762,0.375364950902364,0.549454872801795,0.214368379079066,0.501572104035363,31.0613513439387,33.1434170285167,28.6447756719698,19.4194096048367,28.0883833105963,21.9064230243013,28.3509450097358,24.3173449741079,25.3759749031155,26.9235362110946,0.62272408550506,1.19707462020309,2.39027048055788,0.486213434136588,2.93458427679175,4.04455718590031,3.77819437262746,5.56294654545014,5.77654577265267,3.79045817645696,6.08350319736575,3.9611531691076,2.80924522409647,4.54578582074572,3.4461281373368,3.33405583898152,5.33067899346335,5.20854895252004,2.47251540481984,5.00476328456951,2.74295401908332,3.37204031702741,3.33810665926249,4.65108533223451,5.08190654242785,5.83840794452568,5.48783918618318,3.94604567156764,4.34573164306758,3.36685362994643,4.1522256343461,3.94017929502254,5.32000356120596,4.80304207676495,2.50778594275484,4.24677982494508,4.21076895201735,1.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| |phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.33424243480484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.33166941804883,2.20256102594018,0,4.14247797122848,3.51497892375155,6.02732687130279,1.81982348112971,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,13.7575193384526,21.1596391708813,17.1134478946668,1.35537812827653,0,0,0,0,0.599200221036809,1.53687322128622,1.34796496001021,2.29510095163874,1.47227472945967,18.852964970651,17.2277461942259,3.42974237801871,1.82106394934649,5.51531271966013,33.0347642998166,26.9420283359746,26.5739302533301,14.1118327871307,15.2784364816024,15.6274011167028,19.2636269310953,23.6360296213306,22.7669389187447,24.7488011797881,22.9218406086556,18.6399445825301,0.151452386666368,0.982430281388212,0.289864488701678,0,0,0,0,0,1.96622188184453,0,0,0,2.67602497575693,0,0,0,0,0,0,2.51204535381932,0.517875767294343,3.41416919849097,0.346970653532272,0.304465478312141,0.230615497256059,1.20578112442098,1.88141931417128,1.0053327306374,2.22475470960936,3.61498392299779,0,1.61766849947409,2.65009822152472,1.93950101254089,0,5.5628351432194,4.1889341362691,0.255457055208591,0,0,0,28.9095934051308,19.6725259212009,10.0523481690292,21.7280400240346,28.640131220997,24.5189892580281,24.8229132493669,0.81471491080253,1.61729061793121,0.252722758433675,1.26265113531884,2.08192708740326,2.06911893990126,3.60124259610698,3.0140963567143,3.6739709541717,3.45907044769094,3.74806898238915,6.72628763921441,0.215567992932842,0.567318240503458,0.527853372491847,0.657587197282725,0,0.696504333044333,0.61734640922383,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0,0.473489471170421,0.983821158737019,0.462801338662135,0.697601834251224,1.87791380979733,3.61972561338225,1.6455984991348,4.92502392237286,7.05298643048945,7.30999937126662,3.73235195994786,7.91817870686193,33.015521924568,8.43817821510132,0,0.528901133327089,0.853153002140936,2.09013004674395,0.38660238396628,0.605050573870028,0.667134131534611,0.190225626112559,0,0.164698954724011,1.00534083520108,0.397912944082302,0.19496408711912,0,0.432276099749388,0.597423819763102,0.569003702859245,0.799739588268102,1.1270773567308,0.610953983535943,0.969762435838129,2.17421041659988,1.07502113111237,1.03327103585722,0.627994911365499,1.23397163921801,0,0.333690211432188,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,7.39012760666419,0,0.977789858652155,1.69745085775188,3.75504397261603,3.68513766371995,9.28370199455454,9.75668239288994,5.51723004371669,7.0868700687608,8.45110273884682,12.6174752331118,9.67035898449015,14.8988530338957,0,0,0.491764273019036,1.10374698521893,16.215609588767,20.6292568402278,0,7.57412781613119,5.36363973007636,4.68526493155966,3.66219776145758,0.955875191810208,2.45078541490634,1.13230612315533,7.69140333182299,6.13737301613755,7.90575555893047,14.4594592389813,0.99358059645788,0.35613120733451,0.81443479676788,0.989820737835213,0,0.485561272309963,0.302323556964751,0.377210159511796,1.77181135728464,1.84461088766356,0.775284879504663,1.45413491791002,1.42598951353889,0.948110273807448,1.05418608574999,1.03135543248187,4.08527526904546,1.8006109403131,1.94038025674132,4.07240366560025,7.09360934569094,6.95638388648075,8.22745103010605,5.48036908406279,0,0.21183207086382,0.220528398054962,0.32977250588296,1.77610869365496,0.180938774784468,0.716234064018819,0.656563598980245,0.582961673259701,15.0194494628513,0,1.03193433981611,0.555583582109135,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.627264888043406,1.09181281873089,0.404593039154462,0.826534557253359,1.30877970992015,0.518459893167171,0,0,0.299033092087958,0.330916980914195,0.388902376688095,0.645799117388655,0.506868376472335,0.58678619322877,0.2604087696879,0.314578033277133,0,0.576060012515731,0.316011120628178,0.608175645870493,0.410843828659309,0.649604114888975,0,0.596044064343795,0.120195449519969,0.443068581523732,0.403865799792591,0.15241361331,0.100826185136841,0.292373642219257,0.192423683280659,0.116876902181569,5.8949899739955,0,0,0,0.772758376128762,0.375364950902364,0.549454872801795,0.214368379079066,0.501572104035363,31.0613513439387,33.1434170285167,28.6447756719698,19.4194096048367,28.0883833105963,21.9064230243013,28.3509450097358,24.3173449741079,25.3759749031155,26.9235362110946,0.62272408550506,1.19707462020309,2.39027048055788,0.486213434136588,2.93458427679175,4.04455718590031,3.77819437262746,5.56294654545014,5.77654577265267,3.79045817645696,6.08350319736575,3.9611531691076,2.80924522409647,4.54578582074572,3.4461281373368,3.33405583898152,5.33067899346335,5.20854895252004,2.47251540481984,5.00476328456951,2.74295401908332,3.37204031702741,3.33810665926249,4.65108533223451,5.08190654242785,5.83840794452568,5.48783918618318,3.94604567156764,4.34573164306758,3.36685362994643,4.1522256343461,3.94017929502254,5.32000356120596,4.80304207676495,2.50778594275484,4.24677982494508,4.21076895201735,1.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| ||
|short_description=p1@Ccdc85a | |||
}} | }} |
Latest revision as of 06:09, 27 September 2015
Short description: | p1@Ccdc85a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccdc85a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000093253, ENSMUST00000109501, ENSMUST00000109502, NM_001166661, NM_001166662, NM_181577, uc007igk.2, uc007igl.2, uc007igm.1_5end |
EntrezGene: | Ccdc85a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.47e-13 | 33 |
neuronal stem cell | 1.47e-13 | 33 |
neuroblast | 1.47e-13 | 33 |
electrically signaling cell | 1.47e-13 | 33 |
CNS neuron (sensu Vertebrata) | 2.66e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.66e-12 | 23 |
ectodermal cell | 1.14e-11 | 44 |
neurectodermal cell | 1.14e-11 | 44 |
electrically responsive cell | 1.41e-11 | 39 |
electrically active cell | 1.41e-11 | 39 |
neural cell | 1.57e-11 | 43 |