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FFCP PHASE1:Mm9::chr11:69373688..69373715,-: Difference between revisions

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(Created page with "{{FFCP |id=chr11:69373688..69373715,- |short_description=p2@Efnb3 |description=CAGE_peak_2_at_Efnb3_5end |association_with_transcript=0bp_to_ENSMUST00000004036_5end |Entr...")
 
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{{FFCP
{{FFCP
|id=chr11:69373688..69373715,-
|DHSsupport=NA
|short_description=p2@Efnb3
|DPIdataset=NA
|description=CAGE_peak_2_at_Efnb3_5end
|association_with_transcript=0bp_to_ENSMUST00000004036_5end
|EntrezGene=13643
|EntrezGene=13643
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=O35393
|UniProt=O35393
|association_with_transcript=0bp_to_ENSMUST00000004036_5end
|cluster_id=chr11:69373688..69373715,-
|description=CAGE_peak_2_at_Efnb3_5end
|id=chr11:69373688..69373715,-
|ontology_enrichment_celltype=CL:0000117!1.96e-14!23;CL:0000337!1.96e-14!23;CL:0000540!6.93e-12!33;CL:0000047!6.93e-12!33;CL:0000031!6.93e-12!33;CL:0000404!6.93e-12!33;CL:0002319!8.56e-09!43;CL:0000221!9.31e-09!44;CL:0000133!9.31e-09!44;CL:0000393!2.12e-07!39;CL:0000211!2.12e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.88e-15,23;CL:0000337,3.88e-15,23;CL:0000540,4.58e-12,33;CL:0000047,4.58e-12,33;CL:0000031,4.58e-12,33;CL:0000404,4.58e-12,33;CL:0002319,1.07e-08,43;CL:0000221,1.15e-08,44;CL:0000133,1.15e-08,44;CL:0000393,5.92e-08,39;CL:0000211,5.92e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.24e-22!73;UBERON:0005743!1.24e-22!73;UBERON:0000073!6.28e-21!75;UBERON:0001016!6.28e-21!75;UBERON:0002346!9.12e-21!71;UBERON:0003075!9.12e-21!71;UBERON:0007284!9.12e-21!71;UBERON:0001049!1.46e-20!52;UBERON:0005068!1.46e-20!52;UBERON:0006241!1.46e-20!52;UBERON:0007135!1.46e-20!52;UBERON:0000033!5.02e-19!63;UBERON:0000955!8.09e-19!50;UBERON:0006238!8.09e-19!50;UBERON:0004121!1.80e-18!102;UBERON:0000924!1.80e-18!102;UBERON:0006601!1.80e-18!102;UBERON:0002616!2.67e-18!49;UBERON:0003056!1.40e-16!49;UBERON:0003080!6.71e-15!40;UBERON:0002780!2.67e-14!39;UBERON:0001890!2.67e-14!39;UBERON:0006240!2.67e-14!39;UBERON:0002020!4.63e-14!34;UBERON:0002791!5.00e-11!29;UBERON:0003528!5.00e-11!29;UBERON:0001893!5.00e-11!29;UBERON:0000153!4.32e-10!94;UBERON:0000025!9.93e-10!114;UBERON:0007811!1.99e-08!86;UBERON:0000468!2.90e-08!333;UBERON:0004111!3.48e-08!122
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.20e-25,92;UBERON:0001017,5.40e-23,73;UBERON:0000073,4.22e-22,54;UBERON:0002346,9.55e-22,64;UBERON:0003075,9.55e-22,64;UBERON:0007284,9.55e-22,64;UBERON:0001016,1.83e-21,75;UBERON:0001049,4.95e-21,52;UBERON:0005068,4.95e-21,52;UBERON:0006241,4.95e-21,52;UBERON:0007135,4.95e-21,52;UBERON:0004121,1.07e-18,95;UBERON:0000924,1.07e-18,95;UBERON:0006601,1.07e-18,95;UBERON:0010371,2.49e-18,73;UBERON:0000955,2.01e-17,47;UBERON:0006238,2.01e-17,47;UBERON:0002616,6.83e-17,46;UBERON:0003056,7.01e-17,49;UBERON:0003080,4.30e-15,40;UBERON:0002780,1.82e-14,39;UBERON:0001890,1.82e-14,39;UBERON:0006240,1.82e-14,39;UBERON:0002020,4.64e-14,34;UBERON:0003528,6.63e-11,29;UBERON:0002791,6.63e-11,29;UBERON:0001893,6.63e-11,29;UBERON:0000025,8.85e-09,114;UBERON:0004111,2.92e-07,122;UBERON:0002420,6.16e-07,8;UBERON:0007245,6.16e-07,8;UBERON:0010009,6.16e-07,8;UBERON:0010011,6.16e-07,8;UBERON:0000454,6.16e-07,8
|phase1_expression=8.80818659076367,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84746753861098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7358701652206,1.30815093828268,0.659058548203415,0.194429899074283,4.61955191363696,0,0,0,0,0,0,0,44.1049884673923,46.0222151966669,52.6080064910129,2.71075625655306,4.4464739805557,0,0,0,2.69640099466564,7.68436610643109,13.6870288247191,18.4958135514416,14.5124223332454,34.5637691128602,29.8172530284678,20.3334726696824,22.2361492762308,22.9804696652505,29.731287869835,22.2175968268227,27.9563890526363,49.3254716110925,64.315813452494,46.8822033501084,33.7811428791671,30.3891809417107,30.2540530598084,36.5339445987348,38.1556104541596,36.1614924901083,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,3.66192891419369,0,0,0,0,0,0,0.68510327831436,0,0.742210695324124,6.93941307064543,7.30717147949139,3.92046345335299,3.01445281105245,2.3517741427141,0.502666365318702,0,0.289198713839823,0,1.13236794963186,0.441683036920787,0,0,8.78342391034641,7.95897485891129,0.255457055208591,0,0,0,31.6058249144176,57.6450759551469,37.8219599859722,17.5562563394199,13.5529192385075,44.4666415357459,39.4246269254651,7.12875546952214,0.248813941220186,0.252722758433675,4.62972082950243,19.1277051155174,12.644615743841,11.884100567153,7.9873553452929,8.16437989815934,6.79002717509704,6.74652416830048,5.95017752699736,26.0837271448739,26.8530633838303,25.5129130037726,20.604398848192,14.7365042089567,6.96504333044333,4.32142486456681,10.5488161413801,0,0,0,30.8617401077898,27.2050229578072,25.0286265430811,25.8051761787879,25.1858216636677,24.2199367233184,20.2304531932855,21.1935987105699,19.1495161482158,32.2537305830422,12.8050621981694,13.2142159559745,12.2807989437279,9.22110484222413,10.1996878257883,29.2303028504137,50.2174508410908,0,0,10.2378360256912,7.19933682767359,5.02583099156164,4.03367049246685,4.66993892074228,1.71203063501303,0,2.9645811850322,2.76468729680296,2.18852119245266,1.55971269695296,0,0.216138049874694,0.199141273254367,6.44870863240478,3.77020091612105,7.88954149711563,4.2766778847516,3.87904974335251,3.64706263429657,2.08680572510049,0,0,0,0,1.66845105716094,1.37591296579242,0.224862112384854,0.608580364165509,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0.179397413521912,0.482443521363367,0,8.90609635321278,7.00749398700711,3.05541154395339,2.34690248288502,2.68010011906905,0.952174563544055,0.780534591431195,0.945810864637146,2.43611158613652,2.07291199254733,0,0.345369963731791,0,0,0,0,0.275936746304732,43.6697604766794,43.9543824720762,0,0.757412781613119,0.631016438832513,2.34263246577983,3.23135096599198,1.91175038362042,3.11918143715352,1.98153571552183,3.64329631507405,6.42962887404886,3.16230222357219,21.5285282002611,2.12910127812403,17.0942979520565,11.4020871547503,6.92874516484649,0,5.58395463156457,3.62788268357701,2.26326095707078,2.95301892880773,3.3817866273832,2.06742634534577,1.81766864738753,1.42598951353889,1.58018378967908,0,0,0,17.6459872150684,25.2249433376371,18.8616590827801,16.3153014950892,18.3719882130133,14.4803138129866,15.22324745573,0.23467170806371,0,0.441056796109924,0.32977250588296,2.74489525383039,1.68876189798836,1.67121281604391,0.492422699235184,0.291480836629851,63.4154532875943,0,4.74689796315412,1.66675074632741,0.188368457004691,0,0,0,0,0,0,12.0207677560831,5.89626454667861,4.75223499615926,3.76358932826044,2.83871332870031,2.02296519577231,1.90102948168273,0.26175594198403,0.129614973291793,0,1.12738587736838,5.83114529571517,8.60384150376908,8.36140109879405,7.8787492321416,7.60302564708502,6.92407708009948,2.21347454234715,3.25063967719704,2.17425708743405,0.864090018773596,0.316011120628178,3.85177909051312,1.64337531463724,0.909445760844565,0.716106782669926,0.39736270956253,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.375364950902364,2.19781949120718,0,0,18.6368108063632,10.5874804396651,16.6139698897425,8.76451229952807,6.16574267793578,8.3093328712867,10.1253375034771,6.75481804836331,6.79713613476307,6.73088405277366,6.95375228813984,21.1483182902546,18.6099630272006,12.8846560046196,6.49800804146745,4.22840069435032,7.55638874525492,10.0957178047058,9.94849549734627,10.1078884705519,8.11133759648767,6.41329560712659,7.30403758265083,8.57937042225248,7.92609471587463,6.66811167796303,8.69132444586416,5.40145817298374,6.59337441285291,5.2991611248383,9.25746981440622,4.96932257246145,7.15308569841963,6.54058874845478,7.15231291156513,7.1922416707925,8.04883080640199,7.10288220882176,7.06181391998481,14.5896990631012,9.01626137743724,7.97886307242064,4.09231043169689,6.50734732981057,7.13754460630223,25.7304895276084,6.08222181958062,9.23945532407683,4.97349663378993,2.20591419119516,1.15933917810211
|phase1_expression=8.80818659076367,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84746753861098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7358701652206,1.30815093828268,0.659058548203415,0.194429899074283,4.61955191363696,0,0,0,0,0,0,0,44.1049884673923,46.0222151966669,52.6080064910129,2.71075625655306,4.4464739805557,0,0,0,2.69640099466564,7.68436610643109,13.6870288247191,18.4958135514416,14.5124223332454,34.5637691128602,29.8172530284678,20.3334726696824,22.2361492762308,22.9804696652505,29.731287869835,22.2175968268227,27.9563890526363,49.3254716110925,64.315813452494,46.8822033501084,33.7811428791671,30.3891809417107,30.2540530598084,36.5339445987348,38.1556104541596,36.1614924901083,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,3.66192891419369,0,0,0,0,0,0,0.68510327831436,0,0.742210695324124,6.93941307064543,7.30717147949139,3.92046345335299,3.01445281105245,2.3517741427141,0.502666365318702,0,0.289198713839823,0,1.13236794963186,0.441683036920787,0,0,8.78342391034641,7.95897485891129,0.255457055208591,0,0,0,31.6058249144176,57.6450759551469,37.8219599859722,17.5562563394199,13.5529192385075,44.4666415357459,39.4246269254651,7.12875546952214,0.248813941220186,0.252722758433675,4.62972082950243,19.1277051155174,12.644615743841,11.884100567153,7.9873553452929,8.16437989815934,6.79002717509704,6.74652416830048,5.95017752699736,26.0837271448739,26.8530633838303,25.5129130037726,20.604398848192,14.7365042089567,6.96504333044333,4.32142486456681,10.5488161413801,0,0,0,30.8617401077898,27.2050229578072,25.0286265430811,25.8051761787879,25.1858216636677,24.2199367233184,20.2304531932855,21.1935987105699,19.1495161482158,32.2537305830422,12.8050621981694,13.2142159559745,12.2807989437279,9.22110484222413,10.1996878257883,29.2303028504137,50.2174508410908,0,0,10.2378360256912,7.19933682767359,5.02583099156164,4.03367049246685,4.66993892074228,1.71203063501303,0,2.9645811850322,2.76468729680296,2.18852119245266,1.55971269695296,0,0.216138049874694,0.199141273254367,6.44870863240478,3.77020091612105,7.88954149711563,4.2766778847516,3.87904974335251,3.64706263429657,2.08680572510049,0,0,0,0,1.66845105716094,1.37591296579242,0.224862112384854,0.608580364165509,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0.179397413521912,0.482443521363367,0,8.90609635321278,7.00749398700711,3.05541154395339,2.34690248288502,2.68010011906905,0.952174563544055,0.780534591431195,0.945810864637146,2.43611158613652,2.07291199254733,0,0.345369963731791,0,0,0,0,0.275936746304732,43.6697604766794,43.9543824720762,0,0.757412781613119,0.631016438832513,2.34263246577983,3.23135096599198,1.91175038362042,3.11918143715352,1.98153571552183,3.64329631507405,6.42962887404886,3.16230222357219,21.5285282002611,2.12910127812403,17.0942979520565,11.4020871547503,6.92874516484649,0,5.58395463156457,3.62788268357701,2.26326095707078,2.95301892880773,3.3817866273832,2.06742634534577,1.81766864738753,1.42598951353889,1.58018378967908,0,0,0,17.6459872150684,25.2249433376371,18.8616590827801,16.3153014950892,18.3719882130133,14.4803138129866,15.22324745573,0.23467170806371,0,0.441056796109924,0.32977250588296,2.74489525383039,1.68876189798836,1.67121281604391,0.492422699235184,0.291480836629851,63.4154532875943,0,4.74689796315412,1.66675074632741,0.188368457004691,0,0,0,0,0,0,12.0207677560831,5.89626454667861,4.75223499615926,3.76358932826044,2.83871332870031,2.02296519577231,1.90102948168273,0.26175594198403,0.129614973291793,0,1.12738587736838,5.83114529571517,8.60384150376908,8.36140109879405,7.8787492321416,7.60302564708502,6.92407708009948,2.21347454234715,3.25063967719704,2.17425708743405,0.864090018773596,0.316011120628178,3.85177909051312,1.64337531463724,0.909445760844565,0.716106782669926,0.39736270956253,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.375364950902364,2.19781949120718,0,0,18.6368108063632,10.5874804396651,16.6139698897425,8.76451229952807,6.16574267793578,8.3093328712867,10.1253375034771,6.75481804836331,6.79713613476307,6.73088405277366,6.95375228813984,21.1483182902546,18.6099630272006,12.8846560046196,6.49800804146745,4.22840069435032,7.55638874525492,10.0957178047058,9.94849549734627,10.1078884705519,8.11133759648767,6.41329560712659,7.30403758265083,8.57937042225248,7.92609471587463,6.66811167796303,8.69132444586416,5.40145817298374,6.59337441285291,5.2991611248383,9.25746981440622,4.96932257246145,7.15308569841963,6.54058874845478,7.15231291156513,7.1922416707925,8.04883080640199,7.10288220882176,7.06181391998481,14.5896990631012,9.01626137743724,7.97886307242064,4.09231043169689,6.50734732981057,7.13754460630223,25.7304895276084,6.08222181958062,9.23945532407683,4.97349663378993,2.20591419119516,1.15933917810211
|short_description=p2@Efnb3
}}
}}

Latest revision as of 00:20, 2 October 2015

Short description:p2@Efnb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Efnb3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000004036_5end
EntrezGene:Efnb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Efnb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C344.10
Mouse Granule cells, donor2.CNhs12357.11731-123E346.02
Mouse Granule cells, donor3.CNhs12108.11636-122C752.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.69
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.50
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F134.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D727.96
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D449.33
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F464.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D846.88
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E433.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E530.39
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I630.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D636.53
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F638.16
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.16
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.78
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A431.61
corpus striatum, adult.CNhs10487.19-21D857.65
corpus striatum, neonate N00.CNhs11226.630-43F137.82
cortex, adult.CNhs10473.12-14D517.56
cortex, neonate N30.CNhs11107.1392-42F213.55
diencephalon, adult.CNhs10482.20-12F244.47
diencephalon, neonate N30.CNhs11201.1388-42B239.42
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.13
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C619.13
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C911.88
eyeball, embryo E17.CNhs11023.1261-18D47.99
eyeball, neonate N00.CNhs11207.633-15C68.16
eyeball, neonate N01.CNhs11140.1532-43E76.79
eyeball, neonate N02.CNhs11205.1551-44G86.75
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E226.08
forelimb, embryo E12.CNhs10600.359-14H226.85
forelimb, embryo E13.CNhs10589.384-1E225.51
forelimb, embryo E14.CNhs10577.413-26A820.60
forelimb, embryo E15.CNhs11007.437-20E714.74
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I610.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E930.86
heart, embryo E12.CNhs11015.353-12F527.21
heart, embryo E13.CNhs11013.376-3I925.03
heart, embryo E14.CNhs10597.403-26D425.81
heart, embryo E15.CNhs11017.431-16C825.19
heart, embryo E16.CNhs11021.457-17C624.22
heart, embryo E17.CNhs11025.479-18E520.23
heart, embryo E18.CNhs11030.1283-20G321.19
heart, neonate N00.CNhs11213.639-21E319.15
heart, neonate N03.CNhs11221.1349-25I232.25
heart, neonate N10.CNhs11118.749-24G112.81
heart, neonate N16.CNhs11209.782-15G113.21
heart, neonate N20.CNhs11127.821-26I612.28
heart, neonate N25.CNhs11196.1351-25D39.22
heart, neonate N30.CNhs11202.1390-42D210.20
hippocampus, adult.CNhs10478.13-16E829.23
hippocampus, neonate N00.CNhs11228.627-43G150.22
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I510.24
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D85.03
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I96.45
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G73.65
kidney, neonate N10.CNhs11206.758-6D52.09
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G28.91
lung, embryo E14.CNhs10604.404-26F87.01
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C243.67
medulla oblongata, neonate N30.CNhs11200.1396-42A343.95
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I921.53
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H717.09
ovary, neonate N00.CNhs11217.1299-22I411.40
oviduct, adult pregnant day01.CNhs10500.988-6G66.93
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E617.65
pituitary gland, embryo E13.CNhs11009.370-44C725.22
pituitary gland, embryo E14.CNhs11037.398-44A518.86
pituitary gland, embryo E15.CNhs10592.427-16B916.32
pituitary gland, embryo E16.CNhs11036.449-43F618.37
pituitary gland, embryo E17.CNhs11039.1265-44F514.48
pituitary gland, neonate N00.CNhs11190.1308-22E915.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C963.42
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E312.02
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D44.75
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F55.83
testis, embryo E15.CNhs11034.443-27C58.60
testis, embryo E16.CNhs11033.470-26G58.36
testis, embryo E17.CNhs11029.486-18I57.88
testis, embryo E18.CNhs11027.503-18G57.60
testis, neonate N00.CNhs11189.1300-22B76.92
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I86.95
whole body, embryo E12.CNhs10587.857-27C921.15
whole body, embryo E13.CNhs10512.372-23H218.61
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.95
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.19
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.98
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I525.73
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C29.24
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.88e-1523
neuroblast (sensu Vertebrata)3.88e-1523
neuron4.58e-1233
neuronal stem cell4.58e-1233
neuroblast4.58e-1233
electrically signaling cell4.58e-1233
neural cell1.07e-0843
ectodermal cell1.15e-0844
neurectodermal cell1.15e-0844
electrically responsive cell5.92e-0839
electrically active cell5.92e-0839

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.20e-2592
central nervous system5.40e-2373
regional part of nervous system4.22e-2254
neurectoderm9.55e-2264
neural plate9.55e-2264
presumptive neural plate9.55e-2264
nervous system1.83e-2175
neural tube4.95e-2152
neural rod4.95e-2152
future spinal cord4.95e-2152
neural keel4.95e-2152
ectoderm-derived structure1.07e-1895
ectoderm1.07e-1895
presumptive ectoderm1.07e-1895
ecto-epithelium2.49e-1873
brain2.01e-1747
future brain2.01e-1747
regional part of brain6.83e-1746
pre-chordal neural plate7.01e-1749
anterior neural tube4.30e-1540
regional part of forebrain1.82e-1439
forebrain1.82e-1439
future forebrain1.82e-1439
gray matter4.64e-1434
brain grey matter6.63e-1129
regional part of telencephalon6.63e-1129
telencephalon6.63e-1129
tube8.85e-09114
anatomical conduit2.92e-07122
basal ganglion6.16e-078
nuclear complex of neuraxis6.16e-078
aggregate regional part of brain6.16e-078
collection of basal ganglia6.16e-078
cerebral subcortex6.16e-078
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