FFCP PHASE1:Mm9::chr15:44946206..44946222,-: Difference between revisions
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|id=chr15:44946206..44946222,-
|short_description=p6@Kcnv1
|description=CAGE_peak_6_at_Kcnv1_5end
|association_with_transcript=257bp_to_ENSMUST00000022967,NM_026200...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67498 | |EntrezGene=67498 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BZN2 | |UniProt=Q8BZN2 | ||
|association_with_transcript=257bp_to_ENSMUST00000022967,NM_026200,uc007vql.2,uc007vqm.2_5end | |||
|cluster_id=chr15:44946206..44946222,- | |||
|description=CAGE_peak_6_at_Kcnv1_5end | |||
|id=chr15:44946206..44946222,- | |||
|ontology_enrichment_celltype=CL:0000540!9.88e-09!33;CL:0000047!9.88e-09!33;CL:0000031!9.88e-09!33;CL:0000404!9.88e-09!33;CL:0000107!2.77e-08!9;CL:0000393!8.65e-07!39;CL:0000211!8.65e-07!39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.18e-21!21;UBERON:0001869!1.18e-21!21;UBERON:0000203!1.18e-21!21;UBERON:0001017!2.44e-20!73;UBERON:0005743!2.44e-20!73;UBERON:0002791!3.26e-20!29;UBERON:0003528!3.26e-20!29;UBERON:0001893!3.26e-20!29;UBERON:0002020!5.39e-20!34;UBERON:0000073!1.56e-19!75;UBERON:0001016!1.56e-19!75;UBERON:0002021!4.35e-18!10;UBERON:0000411!4.35e-18!10;UBERON:0001950!4.35e-18!10;UBERON:0004121!1.65e-17!102;UBERON:0000924!1.65e-17!102;UBERON:0006601!1.65e-17!102;UBERON:0002780!6.93e-17!39;UBERON:0001890!6.93e-17!39;UBERON:0006240!6.93e-17!39;UBERON:0003080!2.67e-16!40;UBERON:0002619!2.85e-16!17;UBERON:0001049!5.65e-16!52;UBERON:0005068!5.65e-16!52;UBERON:0006241!5.65e-16!52;UBERON:0007135!5.65e-16!52;UBERON:0000955!9.24e-16!50;UBERON:0006238!9.24e-16!50;UBERON:0002346!3.26e-15!71;UBERON:0003075!3.26e-15!71;UBERON:0007284!3.26e-15!71;UBERON:0002616!1.21e-14!49;UBERON:0003056!2.25e-13!49;UBERON:0000033!4.22e-12!63;UBERON:0002410!2.77e-08!9;UBERON:0007811!5.22e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.13e-49,10;UBERON:0000411,2.13e-49,10;UBERON:0001950,2.13e-49,10;UBERON:0002619,2.38e-34,17;UBERON:0000956,7.35e-33,21;UBERON:0001869,7.35e-33,21;UBERON:0000203,7.35e-33,21;UBERON:0003528,2.39e-27,29;UBERON:0002791,2.39e-27,29;UBERON:0001893,2.39e-27,29;UBERON:0002020,4.67e-23,34;UBERON:0002780,4.67e-23,39;UBERON:0001890,4.67e-23,39;UBERON:0006240,4.67e-23,39;UBERON:0003080,1.97e-22,40;UBERON:0000955,1.08e-21,47;UBERON:0006238,1.08e-21,47;UBERON:0002616,3.03e-19,46;UBERON:0003056,6.06e-18,49;UBERON:0001017,2.62e-17,73;UBERON:0001049,8.61e-17,52;UBERON:0005068,8.61e-17,52;UBERON:0006241,8.61e-17,52;UBERON:0007135,8.61e-17,52;UBERON:0001016,8.72e-17,75;UBERON:0000073,4.29e-16,54;UBERON:0002346,2.56e-15,64;UBERON:0003075,2.56e-15,64;UBERON:0007284,2.56e-15,64;UBERON:0010371,3.69e-13,73;UBERON:0004121,9.21e-13,95;UBERON:0000924,9.21e-13,95;UBERON:0006601,9.21e-13,95;UBERON:0010314,5.59e-10,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829516898467821,0.405017814995072,0.210324961351382,0.285650984403804,0,0.61245399607477,0,0.919218786610021,0,0.383062014255563,0,0,0,0,0,0,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83000241127451,0.376963056338593,4.51943232499919,7.92717917724025,0.83115217823824,1.29793010454206,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0,0,0,0,0,0,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,1.17131623288992,0.861693590931196,0,0,0.283076530788832,0.404810701674894,0.876767573733936,2.76701444562566,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,4.14292712856459,6.30185064783336,3.78077001156113,8.22099023724771,4.5323633843382,7.42524750254986,6.75481804836331,6.34399372577886,3.62432218226274,0,0,0,0.486213434136588,0.209613162627982,0,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829516898467821,0.405017814995072,0.210324961351382,0.285650984403804,0,0.61245399607477,0,0.919218786610021,0,0.383062014255563,0,0,0,0,0,0,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83000241127451,0.376963056338593,4.51943232499919,7.92717917724025,0.83115217823824,1.29793010454206,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0,0,0,0,0,0,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,1.17131623288992,0.861693590931196,0,0,0.283076530788832,0.404810701674894,0.876767573733936,2.76701444562566,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,4.14292712856459,6.30185064783336,3.78077001156113,8.22099023724771,4.5323633843382,7.42524750254986,6.75481804836331,6.34399372577886,3.62432218226274,0,0,0,0.486213434136588,0.209613162627982,0,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p6@Kcnv1 | |||
}} | }} |
Latest revision as of 19:25, 26 September 2015
Short description: | p6@Kcnv1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Kcnv1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 257bp_to_ENSMUST00000022967, NM_026200, uc007vql.2, uc007vqm.2_5end |
EntrezGene: | Kcnv1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.13e-49 | 10 |
visual cortex | 2.13e-49 | 10 |
neocortex | 2.13e-49 | 10 |
regional part of cerebral cortex | 2.38e-34 | 17 |
cerebral cortex | 7.35e-33 | 21 |
cerebral hemisphere | 7.35e-33 | 21 |
pallium | 7.35e-33 | 21 |
brain grey matter | 2.39e-27 | 29 |
regional part of telencephalon | 2.39e-27 | 29 |
telencephalon | 2.39e-27 | 29 |
gray matter | 4.67e-23 | 34 |
regional part of forebrain | 4.67e-23 | 39 |
forebrain | 4.67e-23 | 39 |
future forebrain | 4.67e-23 | 39 |
anterior neural tube | 1.97e-22 | 40 |
brain | 1.08e-21 | 47 |
future brain | 1.08e-21 | 47 |
regional part of brain | 3.03e-19 | 46 |
pre-chordal neural plate | 6.06e-18 | 49 |
central nervous system | 2.62e-17 | 73 |
neural tube | 8.61e-17 | 52 |
neural rod | 8.61e-17 | 52 |
future spinal cord | 8.61e-17 | 52 |
neural keel | 8.61e-17 | 52 |
nervous system | 8.72e-17 | 75 |
regional part of nervous system | 4.29e-16 | 54 |
neurectoderm | 2.56e-15 | 64 |
neural plate | 2.56e-15 | 64 |
presumptive neural plate | 2.56e-15 | 64 |
ecto-epithelium | 3.69e-13 | 73 |
ectoderm-derived structure | 9.21e-13 | 95 |
ectoderm | 9.21e-13 | 95 |
presumptive ectoderm | 9.21e-13 | 95 |
structure with developmental contribution from neural crest | 5.59e-10 | 92 |