FFCP PHASE1:Mm9::chr17:46683224..46683282,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:46683224..46683282,-
|short_description=p1@Cul9
|description=CAGE_peak_1_at_Cul9_5end
|association_with_transcript=54bp_to_ENSMUST00000066026,ENSMUST00000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=78309 | |EntrezGene=78309 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=E9QP09,E9QLV9,Q80TT8 | |UniProt=E9QP09,E9QLV9,Q80TT8 | ||
|association_with_transcript=54bp_to_ENSMUST00000066026,ENSMUST00000113441,NM_001081335,uc008cta.1_5end | |||
|cluster_id=chr17:46683224..46683282,- | |||
|description=CAGE_peak_1_at_Cul9_5end | |||
|id=chr17:46683224..46683282,- | |||
|ontology_enrichment_celltype=CL:0000221!7.88e-11!44;CL:0000133!7.88e-11!44;CL:0002319!1.52e-10!43;CL:0000055!4.25e-10!50;CL:0000117!2.19e-09!23;CL:0000337!2.19e-09!23;CL:0000540!3.16e-09!33;CL:0000047!3.16e-09!33;CL:0000031!3.16e-09!33;CL:0000404!3.16e-09!33;CL:0000393!4.88e-09!39;CL:0000211!4.88e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,7.58e-11,44;CL:0000133,7.58e-11,44;CL:0002319,1.46e-10,43;CL:0000117,2.12e-09,23;CL:0000337,2.12e-09,23;CL:0000540,3.06e-09,33;CL:0000047,3.06e-09,33;CL:0000031,3.06e-09,33;CL:0000404,3.06e-09,33;CL:0000393,4.73e-09,39;CL:0000211,4.73e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.83e-29!73;UBERON:0005743!4.83e-29!73;UBERON:0000073!1.36e-27!75;UBERON:0001016!1.36e-27!75;UBERON:0004121!5.12e-27!102;UBERON:0000924!5.12e-27!102;UBERON:0006601!5.12e-27!102;UBERON:0000033!1.27e-25!63;UBERON:0001049!4.26e-24!52;UBERON:0005068!4.26e-24!52;UBERON:0006241!4.26e-24!52;UBERON:0007135!4.26e-24!52;UBERON:0002346!7.27e-24!71;UBERON:0003075!7.27e-24!71;UBERON:0007284!7.27e-24!71;UBERON:0000955!9.05e-23!50;UBERON:0006238!9.05e-23!50;UBERON:0002616!4.44e-22!49;UBERON:0003056!8.86e-19!49;UBERON:0003080!5.06e-17!40;UBERON:0002780!2.34e-16!39;UBERON:0001890!2.34e-16!39;UBERON:0006240!2.34e-16!39;UBERON:0002020!3.81e-15!34;UBERON:0004111!1.52e-13!122;UBERON:0002791!2.26e-12!29;UBERON:0003528!2.26e-12!29;UBERON:0001893!2.26e-12!29;UBERON:0000025!5.86e-12!114;UBERON:0007811!3.15e-11!86;UBERON:0000153!3.07e-10!94;UBERON:0000956!3.39e-08!21;UBERON:0001869!3.39e-08!21;UBERON:0000203!3.39e-08!21;UBERON:0002619!4.39e-08!17;UBERON:0003076!9.59e-08!12;UBERON:0003057!9.59e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.30e-29,73;UBERON:0004121,5.83e-28,95;UBERON:0000924,5.83e-28,95;UBERON:0006601,5.83e-28,95;UBERON:0001016,1.22e-27,75;UBERON:0002346,1.93e-25,64;UBERON:0003075,1.93e-25,64;UBERON:0007284,1.93e-25,64;UBERON:0000073,3.35e-25,54;UBERON:0001049,3.87e-24,52;UBERON:0005068,3.87e-24,52;UBERON:0006241,3.87e-24,52;UBERON:0007135,3.87e-24,52;UBERON:0010314,6.60e-24,92;UBERON:0010371,1.10e-23,73;UBERON:0000955,3.98e-21,47;UBERON:0006238,3.98e-21,47;UBERON:0002616,1.91e-20,46;UBERON:0003056,8.24e-19,49;UBERON:0003080,4.74e-17,40;UBERON:0002780,2.20e-16,39;UBERON:0001890,2.20e-16,39;UBERON:0006240,2.20e-16,39;UBERON:0002020,3.60e-15,34;UBERON:0004111,1.89e-13,122;UBERON:0003528,2.16e-12,29;UBERON:0002791,2.16e-12,29;UBERON:0001893,2.16e-12,29;UBERON:0000025,7.25e-12,114;UBERON:0000956,3.30e-08,21;UBERON:0001869,3.30e-08,21;UBERON:0000203,3.30e-08,21;UBERON:0002619,4.27e-08,17;UBERON:0003076,9.34e-08,12;UBERON:0003057,9.34e-08,12 | |||
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| ||
|short_description=p1@Cul9 | |||
}} | }} |
Latest revision as of 13:39, 26 September 2015
Short description: | p1@Cul9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cul9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 54bp_to_ENSMUST00000066026, ENSMUST00000113441, NM_001081335, uc008cta.1_5end |
EntrezGene: | Cul9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 7.58e-11 | 44 |
neurectodermal cell | 7.58e-11 | 44 |
neural cell | 1.46e-10 | 43 |
CNS neuron (sensu Vertebrata) | 2.12e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.12e-09 | 23 |
neuron | 3.06e-09 | 33 |
neuronal stem cell | 3.06e-09 | 33 |
neuroblast | 3.06e-09 | 33 |
electrically signaling cell | 3.06e-09 | 33 |
electrically responsive cell | 4.73e-09 | 39 |
electrically active cell | 4.73e-09 | 39 |