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FFCP PHASE1:Mm9::chr17:56109919..56110000,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:56109919..56110000,+
|DHSsupport=NA
|short_description=p1@Shd
|DPIdataset=NA
|description=CAGE_peak_1_at_Shd_5end
|association_with_transcript=14bp_to_NM_001159523,NM_009168,uc008dal.2,uc008dam.2_5end
|EntrezGene=20420
|EntrezGene=20420
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=O88834
|UniProt=O88834
|association_with_transcript=14bp_to_NM_001159523,NM_009168,uc008dal.2,uc008dam.2_5end
|cluster_id=chr17:56109919..56110000,+
|description=CAGE_peak_1_at_Shd_5end
|id=chr17:56109919..56110000,+
|ontology_enrichment_celltype=CL:0000221!1.11e-15!44;CL:0000133!1.11e-15!44;CL:0002319!2.56e-15!43;CL:0000117!3.64e-15!23;CL:0000337!3.64e-15!23;CL:0000540!1.65e-14!33;CL:0000047!1.65e-14!33;CL:0000031!1.65e-14!33;CL:0000404!1.65e-14!33;CL:0000055!3.29e-11!50;CL:0000393!9.75e-11!39;CL:0000211!9.75e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000117,4.97e-16,23;CL:0000337,4.97e-16,23;CL:0000221,6.00e-16,44;CL:0000133,6.00e-16,44;CL:0002319,1.45e-15,43;CL:0000540,7.19e-15,33;CL:0000047,7.19e-15,33;CL:0000031,7.19e-15,33;CL:0000404,7.19e-15,33;CL:0000393,5.17e-11,39;CL:0000211,5.17e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.24e-32!73;UBERON:0005743!2.24e-32!73;UBERON:0000073!1.34e-31!75;UBERON:0001016!1.34e-31!75;UBERON:0004121!7.35e-28!102;UBERON:0000924!7.35e-28!102;UBERON:0006601!7.35e-28!102;UBERON:0002346!1.35e-27!71;UBERON:0003075!1.35e-27!71;UBERON:0007284!1.35e-27!71;UBERON:0000033!1.57e-26!63;UBERON:0001049!2.06e-26!52;UBERON:0005068!2.06e-26!52;UBERON:0006241!2.06e-26!52;UBERON:0007135!2.06e-26!52;UBERON:0000955!1.26e-24!50;UBERON:0006238!1.26e-24!50;UBERON:0002616!3.86e-24!49;UBERON:0003056!3.28e-21!49;UBERON:0002020!6.89e-19!34;UBERON:0003080!1.19e-18!40;UBERON:0002780!6.00e-18!39;UBERON:0001890!6.00e-18!39;UBERON:0006240!6.00e-18!39;UBERON:0002791!1.95e-15!29;UBERON:0003528!1.95e-15!29;UBERON:0001893!1.95e-15!29;UBERON:0000153!1.08e-11!94;UBERON:0007811!1.11e-10!86;UBERON:0000956!1.48e-10!21;UBERON:0001869!1.48e-10!21;UBERON:0000203!1.48e-10!21;UBERON:0000468!1.87e-09!333;UBERON:0000025!5.53e-09!114;UBERON:0002619!9.10e-09!17;UBERON:0003076!2.48e-08!12;UBERON:0003057!2.48e-08!12;UBERON:0004111!8.00e-08!122;UBERON:0000922!2.89e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.80e-34,73;UBERON:0001016,8.84e-33,75;UBERON:0002346,3.49e-31,64;UBERON:0003075,3.49e-31,64;UBERON:0007284,3.49e-31,64;UBERON:0000073,1.52e-29,54;UBERON:0004121,4.95e-28,95;UBERON:0000924,4.95e-28,95;UBERON:0006601,4.95e-28,95;UBERON:0001049,5.37e-28,52;UBERON:0005068,5.37e-28,52;UBERON:0006241,5.37e-28,52;UBERON:0007135,5.37e-28,52;UBERON:0010314,2.41e-26,92;UBERON:0010371,1.85e-25,73;UBERON:0000955,6.78e-24,47;UBERON:0006238,6.78e-24,47;UBERON:0002616,2.17e-23,46;UBERON:0003056,1.84e-22,49;UBERON:0002020,5.44e-20,34;UBERON:0003080,9.77e-20,40;UBERON:0002780,5.45e-19,39;UBERON:0001890,5.45e-19,39;UBERON:0006240,5.45e-19,39;UBERON:0003528,2.56e-16,29;UBERON:0002791,2.56e-16,29;UBERON:0001893,2.56e-16,29;UBERON:0000956,3.98e-11,21;UBERON:0001869,3.98e-11,21;UBERON:0000203,3.98e-11,21;UBERON:0002619,3.17e-09,17;UBERON:0003076,9.20e-09,12;UBERON:0003057,9.20e-09,12;UBERON:0000025,1.36e-07,114;UBERON:0002021,8.24e-07,10;UBERON:0000411,8.24e-07,10;UBERON:0001950,8.24e-07,10
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|phase1_expression=16.9757777931082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.33424243480484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,12.5182615095686,13.7355848519681,6.37089929929968,4.86074747685709,3.77963338388479,14.3752564364972,0,0,0,0.257259436035947,2.57880095944881,1.54701627683233,60.8972547187389,56.0730438028355,52.6080064910129,0.338844532069132,0.889294796111139,0,0.988866362566974,0,2.69640099466564,10.373894243682,12.5464430893258,18.2258016747782,16.8259969081106,58.2728008183759,60.2971116797905,20.8234358665422,19.9358579717932,19.3035945188104,48.450987639731,47.3720024296046,41.627370512442,57.3705351626343,54.709610874241,42.1939830150976,56.394965798279,51.2113975128829,38.3523601919793,46.8459450903132,45.8436812173111,53.310241506036,0.302904773332736,3.02286240427142,0.869593466105033,0,0,0.539703191637817,0,0,2.38755514223978,0,0,0,11.8308472612412,0,0,0,0,0,0,1.7127581957859,0,1.7813056687779,2.4287945747259,2.74018930480927,3.22861696158482,1.65794904607885,1.64624189989987,1.13099932196708,0,0.144599356919912,0,1.13236794963186,0.220841518460394,0.969750506270444,1.86391761218122,28.1069565131085,40.0043210013699,0.255457055208591,0,0,0,54.2242114645458,21.0450277296568,16.2094114225595,28.3333641913411,23.5258220743904,47.9990382932584,36.17980166411,2.03678727700633,0.497627882440372,0.758168275301024,1.89397670297827,9.62891277924007,14.9436367881757,10.2635413989049,11.7549757911858,12.5187158438443,13.3238269096244,10.3071897015702,10.0894314588216,9.26942369611222,12.4810012910761,10.7330185740009,7.89104636739269,8.06337022754234,2.089512999133,3.70407845534298,2.9855140022774,0,0,0,5.79952163099405,3.75241695969754,2.52086886045421,3.07768156260773,3.34499193970586,2.93107514486019,2.79040733700489,2.68273401399619,2.10177616260905,3.12663714835613,2.29834449710733,2.02672023864639,1.46199987425332,0.878200461164203,1.20785776884335,13.6688466566683,17.0821656549612,0.330418782983798,0,4.90562976231038,3.0190767341857,2.83508414908605,2.8235693447268,3.55804870151792,2.85338439168839,0.474529061544512,1.97638745668813,1.50801125280162,1.98956472041151,2.53453313254856,0,1.51296634912286,0.597423819763102,6.44870863240478,7.31190480702264,7.88954149711563,12.0154283428735,14.9343415119072,13.4660774189412,19.0974342115257,15.7942858338174,10.5189147653721,9.62497878590044,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0,0.50925170356284,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,6.63219941196697,2.93336957595647,2.71592137240301,3.05097322775053,2.68010011906905,1.19021820443007,0.390267295715598,4.41378403497335,2.43611158613652,3.50800491046472,1.3109065177259,0.518054945597687,0.433947175744535,0,0,0,0.827810238914197,51.3761887960934,48.4084265625799,0,0.757412781613119,5.36363973007636,3.12350995437311,6.46270193198397,0.955875191810208,2.89638276307112,2.26461224631066,2.83367491172426,6.72188473196017,7.11518000303742,15.7447445046685,0.283880170416537,3.73937767701236,2.44330439030364,2.3095817216155,0,2.91336763385978,1.209294227859,0.377210159511796,1.47650946440386,0,1.03371317267288,0.727067458955011,1.78248689192361,1.58018378967908,0,0,2.7235168460303,15.3051929926614,16.8166288917581,9.00215547132688,6.38424841112185,4.8159580752559,5.10101963866575,7.30715877875038,0.469343416127421,0.847328283455281,0,0.49465875882444,0.645857706783622,0.542816324353403,0.477489376012546,0.820704498725306,1.45740418314925,40.7935664423121,0.341741761595705,2.47664241555867,2.03713980106683,0.188368457004691,0,0.686334519619568,0,0,0.138199973804424,0.954670618015114,3.95419991976419,2.64315307264903,3.45617090629764,2.92723614420256,1.52853794622324,1.34864346384821,2.0663363931334,1.04702376793612,1.55537967950151,0,0,0.747582730219894,1.32366792365678,2.52786544847262,1.93739735216597,2.02747350588934,1.17357238645754,1.95306577265925,0.419437377702843,0.241584120826006,0.576060012515731,0,1.01362607645082,1.23253148597793,0.389762468933385,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.680191150845634,0.665957860122194,0,0.503653849092235,0.19318959403219,0.187682475451182,2.19781949120718,0.214368379079066,0,19.2015626489803,17.0320337507655,20.0513429703789,23.8875923457726,27.4033007908257,24.1726047164704,20.925697507186,29.7211994127986,20.3914084042892,31.0656187051092,13.3885678383588,18.7541690498485,12.4635532200518,6.07766792670735,9.4325923182592,10.1113929647508,7.77863547305653,7.2112270033613,7.38114182061175,7.32821914115013,6.33698249725599,6.03604292435444,5.3375659257833,7.23484222175023,6.60507892989553,6.19181798667996,6.60540657885676,6.55891349576597,5.35711671044299,5.88795680537589,7.54312355247914,6.56660482789549,6.19934093863034,7.99405291477807,5.74067220533517,6.93839784711747,6.0366231048015,6.83981249738391,5.83957689537206,10.661703161497,6.28765596058123,6.69830480153832,4.09231043169689,6.04253680625267,6.36591816237767,14.9886346762768,4.44470056046276,4.08255002691767,2.86932498103265,2.64709702943419,2.08681052058379
|short_description=p1@Shd
}}
}}

Latest revision as of 16:42, 26 September 2015

Short description:p1@Shd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Shd_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 14bp_to_NM_001159523, NM_009168, uc008dal.2, uc008dam.2_5end
EntrezGene:Shd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Shd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C360.90
Mouse Granule cells, donor2.CNhs12357.11731-123E356.07
Mouse Granule cells, donor3.CNhs12108.11636-122C752.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.55
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.23
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D916.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F158.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D560.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D348.45
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F347.37
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D741.63
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D457.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F454.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D842.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E456.39
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E551.21
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I638.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D646.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F645.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E153.31
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B228.11
cerebellum, neonate N30.CNhs11135.1395-42I240.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A454.22
corpus striatum, adult.CNhs10487.19-21D821.05
corpus striatum, neonate N00.CNhs11226.630-43F116.21
cortex, adult.CNhs10473.12-14D528.33
cortex, neonate N30.CNhs11107.1392-42F223.53
diencephalon, adult.CNhs10482.20-12F248.00
diencephalon, neonate N30.CNhs11201.1388-42B236.18
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C69.63
eyeball, embryo E14.CNhs10521.399-16E214.94
eyeball, embryo E15.CNhs10593.426-16C910.26
eyeball, embryo E17.CNhs11023.1261-18D411.75
eyeball, neonate N00.CNhs11207.633-15C612.52
eyeball, neonate N01.CNhs11140.1532-43E713.32
eyeball, neonate N02.CNhs11205.1551-44G810.31
eyeball, neonate N16.CNhs11188.777-19A210.09
forelimb, embryo E11.CNhs10596.335-25E29.27
forelimb, embryo E12.CNhs10600.359-14H212.48
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E78.06
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E813.67
hippocampus, neonate N00.CNhs11228.627-43G117.08
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I96.45
kidney, embryo E15.CNhs10997.434-16F87.31
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C714.93
kidney, neonate N00.CNhs11214.646-21G713.47
kidney, neonate N10.CNhs11206.758-6D519.10
kidney, neonate N20.CNhs11113.832-19I115.79
kidney, neonate N25.CNhs11122.1353-25F310.52
kidney, neonate N30.CNhs11203.1385-42H19.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G26.63
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C251.38
medulla oblongata, neonate N30.CNhs11200.1396-42A348.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E615.31
pituitary gland, embryo E13.CNhs11009.370-44C716.82
pituitary gland, embryo E14.CNhs11037.398-44A59.00
pituitary gland, embryo E15.CNhs10592.427-16B96.38
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C940.79
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D43.46
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A427.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.72
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.07
whole body, embryo E11.CNhs11014.324-5I813.39
whole body, embryo E12.CNhs10587.857-27C918.75
whole body, embryo E13.CNhs10512.372-23H212.46
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F210.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.56
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.70
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.04
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I514.99
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.97e-1623
neuroblast (sensu Vertebrata)4.97e-1623
ectodermal cell6.00e-1644
neurectodermal cell6.00e-1644
neural cell1.45e-1543
neuron7.19e-1533
neuronal stem cell7.19e-1533
neuroblast7.19e-1533
electrically signaling cell7.19e-1533
electrically responsive cell5.17e-1139
electrically active cell5.17e-1139

Uber anatomy
Ontology termp-valuen
central nervous system7.80e-3473
nervous system8.84e-3375
neurectoderm3.49e-3164
neural plate3.49e-3164
presumptive neural plate3.49e-3164
regional part of nervous system1.52e-2954
ectoderm-derived structure4.95e-2895
ectoderm4.95e-2895
presumptive ectoderm4.95e-2895
neural tube5.37e-2852
neural rod5.37e-2852
future spinal cord5.37e-2852
neural keel5.37e-2852
structure with developmental contribution from neural crest2.41e-2692
ecto-epithelium1.85e-2573
brain6.78e-2447
future brain6.78e-2447
regional part of brain2.17e-2346
pre-chordal neural plate1.84e-2249
gray matter5.44e-2034
anterior neural tube9.77e-2040
regional part of forebrain5.45e-1939
forebrain5.45e-1939
future forebrain5.45e-1939
brain grey matter2.56e-1629
regional part of telencephalon2.56e-1629
telencephalon2.56e-1629
cerebral cortex3.98e-1121
cerebral hemisphere3.98e-1121
pallium3.98e-1121
regional part of cerebral cortex3.17e-0917
posterior neural tube9.20e-0912
chordal neural plate9.20e-0912
tube1.36e-07114
occipital lobe8.24e-0710
visual cortex8.24e-0710
neocortex8.24e-0710
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