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FFCP PHASE1:Mm9::chr1:137271532..137271675,-: Difference between revisions

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(Created page with "{{FFCP |id=chr1:137271532..137271675,- |short_description=p1@Shisa4 |description=CAGE_peak_1_at_Shisa4_5end |association_with_transcript=0bp_to_ENSMUST00000159181,NM_17525...")
 
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{{FFCP
{{FFCP
|id=chr1:137271532..137271675,-
|DHSsupport=NA
|short_description=p1@Shisa4
|DPIdataset=NA
|description=CAGE_peak_1_at_Shisa4_5end
|association_with_transcript=0bp_to_ENSMUST00000159181,NM_175259,uc007ctc.1,uc007ctd.1_5end
|EntrezGene=77552
|EntrezGene=77552
|HGNC=
|HGNC=
|MCL_coexpression_id=176
|TSSclassifier=NA
|UniProt=Q8CA71,Q8CEK6
|UniProt=Q8CA71,Q8CEK6
|association_with_transcript=0bp_to_ENSMUST00000159181,NM_175259,uc007ctc.1,uc007ctd.1_5end
|cluster_id=chr1:137271532..137271675,-
|description=CAGE_peak_1_at_Shisa4_5end
|id=chr1:137271532..137271675,-
|ontology_enrichment_celltype=CL:0000055!1.64e-18!50;CL:0000221!5.15e-17!44;CL:0000133!5.15e-17!44;CL:0002319!1.02e-16!43;CL:0000393!8.73e-14!39;CL:0000211!8.73e-14!39;CL:0000540!2.96e-11!33;CL:0000047!2.96e-11!33;CL:0000031!2.96e-11!33;CL:0000404!2.96e-11!33;CL:0002321!2.37e-10!70;CL:0000220!2.37e-10!70;CL:0000117!4.88e-08!23;CL:0000337!4.88e-08!23;CL:0000333!9.72e-07!10;CL:0000095!9.72e-07!10;CL:0000243!9.72e-07!10;CL:0000123!9.72e-07!10;CL:0000125!9.72e-07!10;CL:0000030!9.72e-07!10;CL:0000339!9.72e-07!10
|ontology_enrichment_celltype_v019_2=CL:0000221,4.91e-17,44;CL:0000133,4.91e-17,44;CL:0002319,9.75e-17,43;CL:0000393,8.41e-14,39;CL:0000211,8.41e-14,39;CL:0000540,2.87e-11,33;CL:0000047,2.87e-11,33;CL:0000031,2.87e-11,33;CL:0000404,2.87e-11,33;CL:0002321,3.69e-10,70;CL:0000117,4.78e-08,23;CL:0000337,4.78e-08,23;CL:0000333,9.57e-07,10;CL:0000095,9.57e-07,10;CL:0000243,9.57e-07,10;CL:0000123,9.57e-07,10;CL:0000125,9.57e-07,10;CL:0000030,9.57e-07,10;CL:0000339,9.57e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.00e-28,75;UBERON:0001017,2.75e-28,73;UBERON:0004121,2.26e-26,95;UBERON:0000924,2.26e-26,95;UBERON:0006601,2.26e-26,95;UBERON:0002346,1.41e-19,64;UBERON:0003075,1.41e-19,64;UBERON:0007284,1.41e-19,64;UBERON:0000073,2.99e-19,54;UBERON:0001049,4.29e-18,52;UBERON:0005068,4.29e-18,52;UBERON:0006241,4.29e-18,52;UBERON:0007135,4.29e-18,52;UBERON:0010371,8.50e-17,73;UBERON:0010314,8.64e-16,92;UBERON:0000955,2.11e-15,47;UBERON:0006238,2.11e-15,47;UBERON:0002616,4.99e-15,46;UBERON:0002020,1.63e-13,34;UBERON:0003056,1.98e-12,49;UBERON:0003080,5.97e-12,40;UBERON:0002780,1.66e-11,39;UBERON:0001890,1.66e-11,39;UBERON:0006240,1.66e-11,39;UBERON:0003528,3.43e-11,29;UBERON:0002791,3.43e-11,29;UBERON:0001893,3.43e-11,29;UBERON:0000956,1.57e-08,21;UBERON:0001869,1.57e-08,21;UBERON:0000203,1.57e-08,21;UBERON:0002619,5.52e-08,17;UBERON:0003076,2.92e-07,12;UBERON:0003057,2.92e-07,12
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2726774,121.065537201388,113.433311661001,158.620487303224,119.204358440092,128.416962556249,130.95436504497,147.705354657544,145.45871328393,142.901846043502,14.6340160093689,20.3502685434526,19.122163844463,21.1502843849416,12.5767897576789,16.1782287436012,24.0026466025744,28.8449080134452,25.0316983481616,26.5332072351987,28.1362022878166,31.8778516942469,27.4369616886755,28.2991173629522,29.2920891673628,29.0539151682675,26.8851636192065,26.814381644455,21.4284668417719,22.5214347805628,26.0580631812916,27.5087499546973,21.9361294751535,23.8368123277019,24.6566576688166,27.5843621726865,30.1831155240075,21.834786049341,23.0866993537965,33.1073940278066,25.0319888242007,23.1485533582574,23.735400503842,28.0435682546598,26.6211123153975,49.7123050096512,29.9432458810123,35.6685949720175,49.9262546699681,91.3248475154794,110.369089755321
|phase1_expression=31.06887633833,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,31.721147226349,1.39007331681239,2.08959831311148,0,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,147.17338021345,153.890181591223,205.572362421083,131.441745850471,404.436665085728,458.265377184108,433.578674935652,167.563746685559,337.818526257683,0,0,0,32.4146889405293,42.406949110936,48.988848766357,54.6254444320914,47.0801971552109,43.7343668419264,135.876657359722,80.0365316500025,20.2477436388315,22.7439263390404,19.8934432184908,399.366947321033,884.470538850219,26.1297823017364,28.0812351729917,27.3422449756797,178.531865252377,145.11063140521,23.2732518508413,21.8527673921579,28.4957823849107,172.88193316904,138.923823836684,128.722274868732,53.8096053939191,50.5926669121325,42.7148963856543,143.779244485711,135.063026407603,129.878510610289,79.5497180778903,75.5993625043237,54.6150376268131,23.853750899953,84.7912904398134,10.1452571045587,2.58127163094416,0.679971333707751,1.61910957491345,0,0.448026887097336,54.0711017507245,125.436717417451,111.707981979234,102.821816182509,47.0417022054113,69.2962978037316,73.8935195149272,92.4386714099331,37.2364590539288,42.5644573998166,35.3867111510348,17.127581957859,7.50919862576798,13.0629082377046,26.8902256487511,19.485790611977,22.8309342283498,23.2112866451039,19.1669592631199,9.67632753238501,9.14621380617183,13.3031408366319,25.6537060065464,88.4864669212328,73.540225647311,47.5177748072518,3.72783522436244,60.0200633873672,68.2796264211864,4.34276993854605,0,0,0,98.4124500889685,74.5725982594361,23.2460551408799,178.865225477852,150.872119824895,107.010842948173,108.53940499233,26.4782346010822,25.7522429162893,4.54900965180614,15.1518136238261,20.6891504310699,22.0706020256134,32.0510591053522,28.031096117443,29.051585137617,39.9714807288731,47.1319674535436,38.8055056108524,20.47895932862,18.9106080167819,20.2343792788541,25.4267049615987,15.8486932058591,18.1091126591527,16.0510066398196,22.0928036168527,0,0,0,25.6835957944022,22.7490278181663,20.7071370680167,16.3353867553795,15.7411385397923,21.4431286913456,15.3472403535269,15.8281306825775,10.8591768401468,17.6079039407424,15.7600765515931,10.2146700027778,8.47959927066927,7.90380415047782,5.09984391289413,101.990625053602,36.6340420070253,1.65209391491899,1.32225283331772,31.3533728286794,21.8302471548812,15.3352278973291,11.2942773789072,10.229390016864,11.7939888189787,4.74529061544512,9.55253937399263,11.8127548136127,8.55512829776949,10.7230247915516,5.39291645192533,3.8904848977445,3.18626037206988,31.1055357563054,19.4222471436539,25.9227792048085,19.1432248174595,19.9771061782655,15.2896087360894,30.1005916711465,15.3514553898786,17.583857518234,10.9823475890402,0.889357881261447,4.00428253718626,3.53806191203765,3.59779379815766,1.62288097110802,2.894125917029,1.52775511068852,1.15078454980324,2.10775794807546,2.47105271869273,2.87536413054709,8.18710084870708,3.74445207737473,3.28352541331245,3.94674309748207,0,6.65111484599777,18.1911755299665,15.4816727619925,17.6534889206196,13.1426539041561,7.87279409976534,11.6641384034147,14.6350235893349,23.3300013277163,28.1260155853944,23.7587605299656,9.83179888294428,13.296743603674,5.93061140184197,0,0,3.93411418415229,3.31124095565679,140.481766239318,181.326479158138,84.2625619236112,208.540985870812,46.0642000347735,43.7291393612235,62.0419385470461,76.7089841427692,92.4614497441936,87.7537245445381,56.6734982344852,65.1730563142225,48.2251089094759,60.7297288037215,16.7489300545757,32.5860054711077,28.6681048462294,37.7781581607106,17.2568679841952,23.0641604347232,30.5346792534399,25.838895926558,30.4160949667196,27.0542930190656,19.3821219876166,30.5368332761105,26.7373033788541,18.962205476149,36.8965130012496,38.1601510018291,7.14923172082955,24.8484309763208,32.8571056808196,30.2215219394545,21.8128487379996,24.9716344642899,23.0368628842969,38.9715134866687,11.7335854031855,8.47328283455281,15.2164594657924,20.7756678706265,15.1776561094151,13.148217634338,9.78853220825719,8.86360858623331,4.37221254944776,162.061713957185,2.22132145037209,13.6215332855727,8.51894825900674,3.20226376907975,2.05041341581538,2.51655990527175,0,0,0,10.5013767981662,31.7917673549041,23.7883776538413,20.8450307786076,25.9269487057941,22.9280691933486,26.9728692769641,19.2582551840033,17.275892170946,4.40690909192096,80.7741107013003,0.56369293868419,16.2973035187937,19.5241018739375,30.9177389467036,36.6813898676756,24.6675943216536,20.0680878084239,17.7077963387772,9.12276296503684,1.93267296660805,25.0586105444343,6.00421129193539,15.8125667926328,8.42229848751584,4.02754551231165,1.9692936523423,1.78813219303138,4.92801343031872,4.72606486958647,3.93769154797776,4.64861520595499,3.62974266492626,6.33476224808391,4.9068039236568,3.62318396762864,41.9451209688141,9.54539599508478,5.11368982674011,7.55480773638353,17.9666322449937,16.516057839704,25.8243790216844,12.4333659865858,677.122340447741,105.043842726774,121.065537201388,113.433311661001,158.620487303224,119.204358440092,128.416962556249,130.95436504497,147.705354657544,145.45871328393,142.901846043502,14.6340160093689,20.3502685434526,19.122163844463,21.1502843849416,12.5767897576789,16.1782287436012,24.0026466025744,28.8449080134452,25.0316983481616,26.5332072351987,28.1362022878166,31.8778516942469,27.4369616886755,28.2991173629522,29.2920891673628,29.0539151682675,26.8851636192065,26.814381644455,21.4284668417719,22.5214347805628,26.0580631812916,27.5087499546973,21.9361294751535,23.8368123277019,24.6566576688166,27.5843621726865,30.1831155240075,21.834786049341,23.0866993537965,33.1073940278066,25.0319888242007,23.1485533582574,23.735400503842,28.0435682546598,26.6211123153975,49.7123050096512,29.9432458810123,35.6685949720175,49.9262546699681,91.3248475154794,110.369089755321
|short_description=p1@Shisa4
}}
}}

Latest revision as of 10:42, 26 September 2015

Short description:p1@Shisa4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Shisa4_5end
Coexpression cluster:MCL_coexpression_mm9:176
Association with transcript: 0bp_to_ENSMUST00000159181, NM_175259, uc007ctc.1, uc007ctd.1_5end
EntrezGene:Shisa4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Shisa4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G731.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A331.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8147.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9153.89
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3205.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7131.44
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2404.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8458.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3433.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C4167.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C4337.82
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C132.41
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E142.41
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C548.99
Mouse Granule cells, donor1.CNhs12131.11713-123C354.63
Mouse Granule cells, donor2.CNhs12357.11731-123E347.08
Mouse Granule cells, donor3.CNhs12108.11636-122C743.73
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6135.88
Mouse Meningeal cells, donor3.CNhs12109.11639-122D180.04
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C720.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E722.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.89
Mouse Microglia, donor1.CNhs12629.11718-123C8399.37
Mouse Microglia, donor2.CNhs12634.11736-123E8884.47
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.13
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F528.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1178.53
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5145.11
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D628.50
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3172.88
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3138.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7128.72
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D453.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F450.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D842.71
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4143.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5135.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6129.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D679.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F675.60
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E154.62
Mouse Schwann, donor1.CNhs12507.11728-123D923.85
Mouse Schwann, donor2.CNhs12573.11746-123F984.79
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.15
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A754.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7125.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3111.71
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8102.82
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G647.04
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H169.30
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I873.89
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B692.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G137.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G242.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G335.39
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.13
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D713.06
adrenal gland, embryo E14.CNhs11038.406-44C526.89
adrenal gland, embryo E16.CNhs11004.1254-43D619.49
adrenal gland, embryo E17.CNhs11043.1263-45I122.83
adrenal gland, embryo E18.CNhs11026.1262-18F523.21
adrenal gland, neonate N00.CNhs11191.1311-23C119.17
adrenal gland, neonate N25.CNhs11223.1377-27I39.68
amnion, adult pregnant day17.5.CNhs10488.583-22A89.15
aorta, adult.CNhs10498.46-23H113.30
bone (os femoris), adult.CNhs10483.56-12G225.65
bone (os femoris), neonate N02.CNhs11227.1985-43F588.49
bone (os femoris), neonate N16.CNhs11225.1525-43A673.54
bone (os femoris), neonate N20.CNhs11195.1350-25C347.52
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B260.02
cerebellum, neonate N30.CNhs11135.1395-42I268.28
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A498.41
corpus striatum, adult.CNhs10487.19-21D874.57
corpus striatum, neonate N00.CNhs11226.630-43F123.25
cortex, adult.CNhs10473.12-14D5178.87
cortex, neonate N30.CNhs11107.1392-42F2150.87
diencephalon, adult.CNhs10482.20-12F2107.01
diencephalon, neonate N30.CNhs11201.1388-42B2108.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B126.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.75
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G415.15
eyeball, embryo E12.CNhs11016.345-16C620.69
eyeball, embryo E14.CNhs10521.399-16E222.07
eyeball, embryo E15.CNhs10593.426-16C932.05
eyeball, embryo E17.CNhs11023.1261-18D428.03
eyeball, neonate N00.CNhs11207.633-15C629.05
eyeball, neonate N01.CNhs11140.1532-43E739.97
eyeball, neonate N02.CNhs11205.1551-44G847.13
eyeball, neonate N16.CNhs11188.777-19A238.81
forelimb, embryo E11.CNhs10596.335-25E220.48
forelimb, embryo E12.CNhs10600.359-14H218.91
forelimb, embryo E13.CNhs10589.384-1E220.23
forelimb, embryo E14.CNhs10577.413-26A825.43
forelimb, embryo E15.CNhs11007.437-20E715.85
forelimb, embryo E17.CNhs10598.1517-43C418.11
forelimb, embryo E18.CNhs11008.1520-43B516.05
gonad, embryo E13.CNhs11044.1564-45I622.09
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E925.68
heart, embryo E12.CNhs11015.353-12F522.75
heart, embryo E13.CNhs11013.376-3I920.71
heart, embryo E14.CNhs10597.403-26D416.34
heart, embryo E15.CNhs11017.431-16C815.74
heart, embryo E16.CNhs11021.457-17C621.44
heart, embryo E17.CNhs11025.479-18E515.35
heart, embryo E18.CNhs11030.1283-20G315.83
heart, neonate N00.CNhs11213.639-21E310.86
heart, neonate N03.CNhs11221.1349-25I217.61
heart, neonate N10.CNhs11118.749-24G115.76
heart, neonate N16.CNhs11209.782-15G110.21
heart, neonate N20.CNhs11127.821-26I68.48
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D25.10
hippocampus, adult.CNhs10478.13-16E8101.99
hippocampus, neonate N00.CNhs11228.627-43G136.63
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I531.35
intestine, embryo E13.CNhs11010.381-16D521.83
intestine, embryo E15.CNhs10602.976-16D815.34
intestine, embryo E16.CNhs10585.463-22H411.29
intestine, embryo E17.CNhs10582.482-18D310.23
intestine, embryo E18.CNhs10526.1289-20F711.79
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E99.55
intestine, neonate N06.CNhs11102.688-20B811.81
intestine, neonate N07.CNhs11095.720-20F28.56
intestine, neonate N10.CNhs11098.755-23A510.72
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I931.11
kidney, embryo E15.CNhs10997.434-16F819.42
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I219.14
kidney, embryo E18.CNhs11001.1288-20C719.98
kidney, neonate N00.CNhs11214.646-21G715.29
kidney, neonate N10.CNhs11206.758-6D530.10
kidney, neonate N20.CNhs11113.832-19I115.35
kidney, neonate N25.CNhs11122.1353-25F317.58
kidney, neonate N30.CNhs11203.1385-42H110.98
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B16.65
lung, embryo E12.CNhs10522.354-16G218.19
lung, embryo E14.CNhs10604.404-26F815.48
lung, embryo E15.CNhs11020.432-17C517.65
lung, embryo E16.CNhs10998.458-17B613.14
lung, embryo E17.CNhs10605.480-44A67.87
lung, embryo E18.CNhs10583.1287-20I611.66
lung, neonate N00.CNhs11224.640-42C614.64
lung, neonate N06.CNhs11212.683-20E523.33
lung, neonate N07.CNhs11111.715-19A328.13
lung, neonate N10.CNhs11219.750-23E623.76
lung, neonate N20.CNhs11109.822-18A49.83
lung, neonate N25.CNhs11119.1359-25C713.30
lung, neonate N30.CNhs11133.1394-42H25.93
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C2140.48
medulla oblongata, neonate N30.CNhs11200.1396-42A3181.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C784.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2208.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E146.06
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E243.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E362.04
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D776.71
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D892.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D987.75
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D456.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D565.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D648.23
olfactory brain, adult.CNhs10489.18-22I960.73
ovary, adult.CNhs10507.91-2I716.75
ovary, embryo E18.CNhs11040.505-44H732.59
ovary, neonate N00.CNhs11217.1299-22I428.67
oviduct, adult pregnant day01.CNhs10500.988-6G637.78
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F423.06
pancreas, embryo E15.CNhs11042.1556-45F230.53
pancreas, embryo E16.CNhs11003.460-26E525.84
pancreas, embryo E17.CNhs10599.1558-45G330.42
pancreas, embryo E18.CNhs10580.1535-43I727.05
pancreas, neonate N00.CNhs11105.645-26G919.38
pancreas, neonate N01.CNhs11138.1531-43D730.54
pancreas, neonate N02.CNhs11139.1539-43D826.74
pancreas, neonate N16.CNhs11136.787-43B618.96
pancreas, neonate N25.CNhs11094.1555-45E236.90
pancreas, neonate N30.CNhs11182.1548-44H538.16
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E624.85
pituitary gland, embryo E13.CNhs11009.370-44C732.86
pituitary gland, embryo E14.CNhs11037.398-44A530.22
pituitary gland, embryo E15.CNhs10592.427-16B921.81
pituitary gland, embryo E16.CNhs11036.449-43F624.97
pituitary gland, embryo E17.CNhs11039.1265-44F523.04
pituitary gland, neonate N00.CNhs11190.1308-22E938.97
placenta, adult pregnant day10.CNhs10472.539-13I711.73
placenta, adult pregnant day17.CNhs10464.577-18G38.47
prostate, adult.CNhs10470.859-1F815.22
skin, adult.CNhs10492.30-1C320.78
skin, neonate N00.CNhs11124.650-25G415.18
skin, neonate N03.CNhs11215.662-22H313.15
skin, neonate N06.CNhs11097.693-20I59.79
skin, neonate N10.CNhs11108.762-6C48.86
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C9162.06
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C113.62
spleen, embryo E18.CNhs11011.1271-21F28.52
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E331.79
stomach, embryo E15.CNhs10603.1252-16G823.79
stomach, embryo E16.CNhs11022.459-17D420.85
stomach, embryo E17.CNhs11006.1035-18D525.93
stomach, embryo E18.CNhs10999.1286-20C622.93
stomach, neonate N03.CNhs11193.1340-24B826.97
stomach, neonate N07.CNhs11210.718-18A919.26
stomach, neonate N25.CNhs11104.1355-25E417.28
stomach, neonate N30.CNhs11134.1386-42I14.41
submandibular gland, adult.CNhs10469.59-29C180.77
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F516.30
testis, embryo E15.CNhs11034.443-27C519.52
testis, embryo E16.CNhs11033.470-26G530.92
testis, embryo E17.CNhs11029.486-18I536.68
testis, embryo E18.CNhs11027.503-18G524.67
testis, neonate N00.CNhs11189.1300-22B720.07
testis, neonate N07.CNhs11222.726-26I417.71
testis, neonate N10.CNhs11204.763-44D99.12
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E225.06
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I415.81
thymus, embryo E15.CNhs11005.430-45I28.42
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F84.93
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C43.94
thymus, neonate N07.CNhs11211.713-19D34.65
thymus, neonate N10.CNhs11194.748-24E43.63
thymus, neonate N20.CNhs11186.820-7A26.33
thymus, neonate N25.CNhs11125.1362-25G74.91
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B441.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.55
urinary bladder, adult.CNhs10481.879-12E417.97
uterus, adult pregnant day19.CNhs10497.590-15F516.52
uterus, adult.CNhs10509.92-27E525.82
vagina, adult.CNhs10502.89-27D512.43
vesicular gland, adult.CNhs10491.51-27F8677.12
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1105.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2121.07
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3113.43
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7158.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4119.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5128.42
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6130.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7147.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8145.46
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9142.90
whole body, embryo E11.CNhs11014.324-5I814.63
whole body, embryo E12.CNhs10587.857-27C920.35
whole body, embryo E13.CNhs10512.372-23H219.12
whole body, embryo E14.5.CNhs10578.420-27D221.15
whole body, embryo E14.CNhs10519.395-14B112.58
whole body, embryo E16.CNhs10514.453-14F216.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.84
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G528.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G531.88
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G527.44
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G528.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G529.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G526.89
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G526.81
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.52
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G527.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.94
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.84
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G527.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G530.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G523.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G533.11
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G523.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G523.74
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.04
whole body, embryo E17.5.CNhs10513.490-9F926.62
whole body, embryo E17.CNhs10517.475-3I549.71
whole body, embryo E18.CNhs10516.493-3B329.94
whole body, neonate N00.CNhs10525.657-19C235.67
whole body, neonate N01.CNhs10576.659-23C649.93
whole body, neonate N06.CNhs10515.692-21D191.32
whole body, neonate N10.CNhs10518.761-6B4110.37





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system1.00e-2875
central nervous system2.75e-2873
ectoderm-derived structure2.26e-2695
ectoderm2.26e-2695
presumptive ectoderm2.26e-2695
neurectoderm1.41e-1964
neural plate1.41e-1964
presumptive neural plate1.41e-1964
regional part of nervous system2.99e-1954
neural tube4.29e-1852
neural rod4.29e-1852
future spinal cord4.29e-1852
neural keel4.29e-1852
ecto-epithelium8.50e-1773
structure with developmental contribution from neural crest8.64e-1692
brain2.11e-1547
future brain2.11e-1547
regional part of brain4.99e-1546
gray matter1.63e-1334
pre-chordal neural plate1.98e-1249
anterior neural tube5.97e-1240
regional part of forebrain1.66e-1139
forebrain1.66e-1139
future forebrain1.66e-1139
brain grey matter3.43e-1129
regional part of telencephalon3.43e-1129
telencephalon3.43e-1129
cerebral cortex1.57e-0821
cerebral hemisphere1.57e-0821
pallium1.57e-0821
regional part of cerebral cortex5.52e-0817
posterior neural tube2.92e-0712
chordal neural plate2.92e-0712
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