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FFCP PHASE1:Mm9::chr2:29979997..29980029,-: Difference between revisions

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(Created page with "{{FFCP |id=chr2:29979997..29980029,- |short_description=p2@Zer1 |description=CAGE_peak_2_at_Zer1_5end |association_with_transcript=-23bp_to_ENSMUST00000044751,NM_178694,uc...")
 
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{{FFCP
{{FFCP
|id=chr2:29979997..29980029,-
|DHSsupport=NA
|short_description=p2@Zer1
|DPIdataset=NA
|description=CAGE_peak_2_at_Zer1_5end
|association_with_transcript=-23bp_to_ENSMUST00000044751,NM_178694,uc008jbf.1,uc008jbg.1,uc008jbh.1_5end
|EntrezGene=227693
|EntrezGene=227693
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q80ZJ6,Q3U297
|UniProt=Q80ZJ6,Q3U297
|association_with_transcript=-23bp_to_ENSMUST00000044751,NM_178694,uc008jbf.1,uc008jbg.1,uc008jbh.1_5end
|cluster_id=chr2:29979997..29980029,-
|description=CAGE_peak_2_at_Zer1_5end
|id=chr2:29979997..29980029,-
|ontology_enrichment_celltype=CL:0000221!1.20e-13!44;CL:0000133!1.20e-13!44;CL:0002319!1.97e-13!43;CL:0000540!1.65e-11!33;CL:0000047!1.65e-11!33;CL:0000031!1.65e-11!33;CL:0000404!1.65e-11!33;CL:0000055!1.68e-11!50;CL:0000393!2.54e-10!39;CL:0000211!2.54e-10!39;CL:0000117!1.69e-09!23;CL:0000337!1.69e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000221,1.20e-13,44;CL:0000133,1.20e-13,44;CL:0002319,1.97e-13,43;CL:0000540,1.65e-11,33;CL:0000047,1.65e-11,33;CL:0000031,1.65e-11,33;CL:0000404,1.65e-11,33;CL:0000393,2.54e-10,39;CL:0000211,2.54e-10,39;CL:0000117,1.69e-09,23;CL:0000337,1.69e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.72e-32!73;UBERON:0005743!5.72e-32!73;UBERON:0000073!1.57e-29!75;UBERON:0001016!1.57e-29!75;UBERON:0001049!1.27e-24!52;UBERON:0005068!1.27e-24!52;UBERON:0006241!1.27e-24!52;UBERON:0007135!1.27e-24!52;UBERON:0004121!1.30e-24!102;UBERON:0000924!1.30e-24!102;UBERON:0006601!1.30e-24!102;UBERON:0000955!4.21e-24!50;UBERON:0006238!4.21e-24!50;UBERON:0002616!1.59e-23!49;UBERON:0000033!9.14e-23!63;UBERON:0002346!4.58e-22!71;UBERON:0003075!4.58e-22!71;UBERON:0007284!4.58e-22!71;UBERON:0003080!2.00e-17!40;UBERON:0002780!7.67e-17!39;UBERON:0001890!7.67e-17!39;UBERON:0006240!7.67e-17!39;UBERON:0003056!5.05e-16!49;UBERON:0002020!6.64e-16!34;UBERON:0002791!1.67e-13!29;UBERON:0003528!1.67e-13!29;UBERON:0001893!1.67e-13!29;UBERON:0004111!1.11e-12!122;UBERON:0007811!1.20e-12!86;UBERON:0000025!3.04e-12!114;UBERON:0000153!1.21e-11!94;UBERON:0000956!4.59e-11!21;UBERON:0001869!4.59e-11!21;UBERON:0000203!4.59e-11!21;UBERON:0002619!3.98e-09!17;UBERON:0003076!7.67e-08!12;UBERON:0003057!7.67e-08!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.71e-32,73;UBERON:0001016,1.57e-29,75;UBERON:0000073,3.34e-26,54;UBERON:0004121,6.68e-26,95;UBERON:0000924,6.68e-26,95;UBERON:0006601,6.68e-26,95;UBERON:0001049,1.27e-24,52;UBERON:0005068,1.27e-24,52;UBERON:0006241,1.27e-24,52;UBERON:0007135,1.27e-24,52;UBERON:0002346,5.23e-24,64;UBERON:0003075,5.23e-24,64;UBERON:0007284,5.23e-24,64;UBERON:0010314,4.30e-22,92;UBERON:0000955,7.02e-22,47;UBERON:0006238,7.02e-22,47;UBERON:0010371,1.45e-21,73;UBERON:0002616,2.58e-21,46;UBERON:0003080,2.00e-17,40;UBERON:0002780,7.66e-17,39;UBERON:0001890,7.66e-17,39;UBERON:0006240,7.66e-17,39;UBERON:0003056,5.05e-16,49;UBERON:0002020,6.64e-16,34;UBERON:0003528,1.67e-13,29;UBERON:0002791,1.67e-13,29;UBERON:0001893,1.67e-13,29;UBERON:0004111,1.11e-12,122;UBERON:0000025,3.04e-12,114;UBERON:0000956,4.58e-11,21;UBERON:0001869,4.58e-11,21;UBERON:0000203,4.58e-11,21;UBERON:0002619,3.98e-09,17;UBERON:0003076,7.67e-08,12;UBERON:0003057,7.67e-08,12
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9385,6.48173717644853,2.62035076495413,6.47348862647139,7.76942483818158,3.66458318777641,4.27729411862916,4.34937519160848,25.3661822407886,5.23307911153926,5.29467169462712,10.3059129822345,6.32883135040882,7.7719817725758,9.74065080759758,7.94246747548096,6.71099804324549,13.0455425246043,14.977560325409,3.79213344753814,5.47358081283443,4.5192821152524,3.24802057444488,4.11761400035207,3.17890167650024,3.846254384639,3.69223817936443,2.52416124870369,3.88654713940499,4.03304740547362,4.87289403698762,4.42574471545516,5.72696820689688,10.2028672626845,0.665957860122194,0.986852422704233,0,7.92077335531981,4.69206188627955,6.59345847362154,4.93047271881851,6.01886524842436,18.6368108063632,14.2700823317225,12.6037012956667,24.0594455281163,17.1270629942661,28.7049681008086,18.9006300064906,20.2644541450899,13.1411298605419,19.1571315348173,2.28332164685189,9.17757208822371,5.80494259564056,7.53630822911712,5.03071590307158,8.64064489715066,6.00066165064361,5.35691148821125,5.13470735346904,6.06473308233114,7.09742039692671,4.71565853465191,7.95952813494,7.74704344098918,10.1660780051435,6.19181798667996,11.1248952907061,10.0312794641127,5.35711671044299,8.68473628792944,4.4573002810104,7.0990322463735,5.24559617884106,6.83128158171944,7.43464105281112,6.43071019976741,4.93905526756486,6.05060336307039,6.65440157844723,5.61142271657738,6.28765596058123,8.17587203717177,13.0953933814301,7.12709469455443,8.8737041051325,8.74337022782811,7.71974307869848,6.01638951335235,11.6685882561994,9.70602244125868,8.81097775357602
|phase1_expression=12.0111635328595,4.53668029931169,3.18499467572675,2.72217790176147,2.50447864973174,2.85394762250213,1.16806320297763,6.58528949552039,1.12630977721333,0.70219357896598,1.02730780935303,0.957265907944037,4.62241970814255,8.13009742496676,4.66353666541928,2.02475267389826,3.49780939064073,2.05050407482854,3.15363197293199,3.81950686618227,10.6304112688837,2.6808556824239,1.56719873483361,2.23989391910769,1.60586496747019,1.72269589234506,5.1691439539089,1.50829862880122,1.71021077510736,2.77233142735924,1.33038306393183,1.27006134691926,3.07532393792285,0,2.59966457776147,1.49611180822643,1.02084678131185,5.4409111995798,1.5626706890476,3.66466620781659,8.82347232046521,8.87959130445979,4.36959317728038,5.79125362687656,7.19776211658553,4.22157529971868,26.6013057078333,18.9681886050988,20.2111288115714,15.748821825017,8.81914456239784,14.3752564364972,2.85230430298152,6.5282592781021,4.7053131879945,3.60163210450326,10.0286703978565,8.76642556871652,11.1274053472779,4.23192783417626,10.1413024560989,5.42151251310611,9.78224275722253,6.29929802096979,4.94433181283487,7.104801149461,13.7816050838466,23.0530983192933,15.3460626216547,15.3906769698127,13.6711224878398,16.8534080798244,16.1234034894678,8.94182834269164,7.57179221044067,14.7075005857603,26.4278114398533,25.5374676170375,25.8058975870489,10.5509030184155,6.95306091378313,11.9810075228055,23.7305549151174,19.6966913511088,25.6701056265041,15.9099436155781,12.6710795911202,13.6071595452469,1.8931548333296,2.19157524309678,6.66688324013859,1.72084775396277,1.3599426674155,3.77792234146472,7.79731700937203,7.6164570806547,6.46044332606059,4.60161870960756,4.1565760736459,3.5333957451034,9.71819596459095,11.5493829672886,17.8363667794652,14.2213340630666,0.649473123033642,0.253359865475099,1.51657333504435,4.79572294820052,3.36619248741323,9.94562331734326,5.37804512975021,1.82679286987285,5.5347719341454,4.82312449768392,6.23220147819235,9.80199412371469,7.91023896749996,10.2665543413137,4.42305275974937,8.7354098971601,6.8460870722722,5.33362778448744,0,21.6657789788545,22.2013509222262,3.0654846625031,3.95389910869537,1.79970819298022,3.17675567682662,18.7238299256028,13.7250180845588,6.03140890141749,19.9897968221118,26.338692105024,15.584103341967,19.4689515681309,12.4244023897386,5.47390670684409,9.09801930361229,7.78634866779954,2.86264974517948,4.82794419310293,4.86167750474443,6.32960234910003,10.3415478710018,8.58361925908494,10.026084527891,9.31332134660456,3.44908788692548,5.10586416453112,9.85326295318113,7.01426343768239,7.22922847986555,6.268538997399,5.14455341019859,6.17006227137329,0.702213187313235,2.05878325691772,2.27330799516474,3.52113813310353,4.45599513964083,4.50155153652537,6.39210786080068,7.87056926989615,6.78775296704464,5.34828072925938,5.633741429392,11.4430035519826,8.3925523455875,6.56669856316381,11.1064269077822,10.2339991197733,5.70830299756732,9.93127498826751,25.2347938276953,11.6282211988591,5.28670052774077,2.3800550999719,5.11891801284562,3.0190767341857,5.15469845288373,3.42861991859682,3.7804267453628,3.42406127002606,5.69434873853414,4.94096864172033,6.78605063760728,4.17808591286417,6.43381487493096,5.39291645192533,5.40345124686736,4.38110801159608,3.22435431620239,3.65595240351132,5.63538678365402,2.03651327845314,3.29719228184964,8.27602674705759,6.82954600941979,6.4948465111025,5.49495547444812,6.29325536001183,5.03969466048153,2.33583148002532,2.55526693647164,2.69834534861824,2.43432145666204,2.41177159752417,3.05551022137704,4.60313819921297,3.56697498905078,3.84385978463314,5.75072826109418,4.46569137202204,6.55279113540577,6.06189307073068,4.12614051100398,5.30687873499704,6.28160846566456,4.16881105895066,3.42226450528254,4.75286240170527,5.16318546234705,3.85264392116176,8.56957107189649,14.0496226457615,4.72905432318573,8.63712289630222,9.40783135079174,6.06294264448231,6.56202931090403,7.23245292907558,4.52373851817817,4.35124547054968,3.44234991113325,4.13905119457099,18.4633178485961,21.0981035865966,2.13115428989678,10.0988370881749,10.0962630213202,9.76096860741596,10.7711698866399,6.93009514062401,7.12955757063661,13.0215204162863,10.9298889452221,8.18316402151673,9.88219444866309,16.708708453934,7.2389443456217,10.6839362200353,13.3567306669932,10.2281476242972,5.30980553359851,2.6705869977048,4.83717691143602,4.71512699389745,4.72483028609236,4.91896236710284,8.26970538138308,6.18007340111759,6.06045543254026,6.32073515871632,1.05418608574999,7.21948802737308,18.3837387107046,5.40183282093931,6.98536892426874,10.502514716548,11.3497749531055,18.5503570306153,12.3411765451591,25.5750557256263,1.87737366450968,3.38931313382112,5.95426674748397,5.27636009412736,6.45857706783622,5.36785031860587,5.72987251215055,5.25250879184196,4.66369338607761,21.1384844291981,3.07567585436135,7.01715351074956,4.44466865687308,3.76736914009382,1.0935538217682,3.20289442489132,5.94924504978494,5.318155188299,7.46279858543889,2.86401185404534,3.95419991976419,5.48962561242491,4.42821897369385,6.48173717644853,2.62035076495413,6.47348862647139,7.76942483818158,3.66458318777641,4.27729411862916,4.34937519160848,25.3661822407886,5.23307911153926,5.29467169462712,10.3059129822345,6.32883135040882,7.7719817725758,9.74065080759758,7.94246747548096,6.71099804324549,13.0455425246043,14.977560325409,3.79213344753814,5.47358081283443,4.5192821152524,3.24802057444488,4.11761400035207,3.17890167650024,3.846254384639,3.69223817936443,2.52416124870369,3.88654713940499,4.03304740547362,4.87289403698762,4.42574471545516,5.72696820689688,10.2028672626845,0.665957860122194,0.986852422704233,0,7.92077335531981,4.69206188627955,6.59345847362154,4.93047271881851,6.01886524842436,18.6368108063632,14.2700823317225,12.6037012956667,24.0594455281163,17.1270629942661,28.7049681008086,18.9006300064906,20.2644541450899,13.1411298605419,19.1571315348173,2.28332164685189,9.17757208822371,5.80494259564056,7.53630822911712,5.03071590307158,8.64064489715066,6.00066165064361,5.35691148821125,5.13470735346904,6.06473308233114,7.09742039692671,4.71565853465191,7.95952813494,7.74704344098918,10.1660780051435,6.19181798667996,11.1248952907061,10.0312794641127,5.35711671044299,8.68473628792944,4.4573002810104,7.0990322463735,5.24559617884106,6.83128158171944,7.43464105281112,6.43071019976741,4.93905526756486,6.05060336307039,6.65440157844723,5.61142271657738,6.28765596058123,8.17587203717177,13.0953933814301,7.12709469455443,8.8737041051325,8.74337022782811,7.71974307869848,6.01638951335235,11.6685882561994,9.70602244125868,8.81097775357602
|short_description=p2@Zer1
}}
}}

Latest revision as of 12:51, 26 September 2015

Short description:p2@Zer1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Zer1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -23bp_to_ENSMUST00000044751, NM_178694, uc008jbf.1, uc008jbg.1, uc008jbh.1_5end
EntrezGene:Zer1
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p2@Zer1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.13
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.79
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B726.60
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.97
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.21
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C311.13
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C813.78
Mouse Microglia, donor2.CNhs12634.11736-123E823.05
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.39
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.12
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.54
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.55
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.61
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F92.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D79.95
adrenal gland, embryo E14.CNhs11038.406-44C55.38
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I39.80
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H110.27
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F58.74
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B221.67
cerebellum, neonate N30.CNhs11135.1395-42I222.20
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A418.72
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D519.99
cortex, neonate N30.CNhs11107.1392-42F226.34
diencephalon, adult.CNhs10482.20-12F215.58
diencephalon, neonate N30.CNhs11201.1388-42B219.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.42
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.47
epididymis, adult.CNhs10490.58-23B29.10
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D46.33
eyeball, neonate N00.CNhs11207.633-15C610.34
eyeball, neonate N01.CNhs11140.1532-43E78.58
eyeball, neonate N02.CNhs11205.1551-44G810.03
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H25.11
forelimb, embryo E13.CNhs10589.384-1E29.85
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I94.50
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C87.87
heart, embryo E16.CNhs11021.457-17C66.79
heart, embryo E17.CNhs11025.479-18E55.35
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E311.44
heart, neonate N03.CNhs11221.1349-25I28.39
heart, neonate N10.CNhs11118.749-24G16.57
heart, neonate N16.CNhs11209.782-15G111.11
heart, neonate N20.CNhs11127.821-26I610.23
heart, neonate N25.CNhs11196.1351-25D35.71
heart, neonate N30.CNhs11202.1390-42D29.93
hippocampus, adult.CNhs10478.13-16E825.23
hippocampus, neonate N00.CNhs11228.627-43G111.63
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D85.15
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E94.94
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G78.28
kidney, neonate N10.CNhs11206.758-6D56.83
kidney, neonate N20.CNhs11113.832-19I16.49
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H16.29
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B96.55
liver, neonate N20.CNhs11220.823-25A36.06
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I68.57
lung, neonate N00.CNhs11224.640-42C614.05
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A38.64
lung, neonate N10.CNhs11219.750-23E69.41
lung, neonate N20.CNhs11109.822-18A46.06
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H27.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C218.46
medulla oblongata, neonate N30.CNhs11200.1396-42A321.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.10
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.77
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I77.24
ovary, embryo E18.CNhs11040.505-44H710.68
ovary, neonate N00.CNhs11217.1299-22I413.36
oviduct, adult pregnant day01.CNhs10500.988-6G610.23
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G818.38
pituitary gland, embryo E12.CNhs11018.346-16E65.40
pituitary gland, embryo E13.CNhs11009.370-44C76.99
pituitary gland, embryo E14.CNhs11037.398-44A510.50
pituitary gland, embryo E15.CNhs10592.427-16B911.35
pituitary gland, embryo E16.CNhs11036.449-43F618.55
pituitary gland, embryo E17.CNhs11039.1265-44F512.34
pituitary gland, neonate N00.CNhs11190.1308-22E925.58
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C35.28
skin, neonate N00.CNhs11124.650-25G46.46
skin, neonate N03.CNhs11215.662-22H35.37
skin, neonate N06.CNhs11097.693-20I55.73
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C921.14
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C17.02
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.46
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G85.49
stomach, embryo E16.CNhs11022.459-17D44.43
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B86.47
stomach, neonate N07.CNhs11210.718-18A97.77
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I14.28
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G525.37
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C55.29
testis, embryo E16.CNhs11033.470-26G510.31
testis, embryo E17.CNhs11029.486-18I56.33
testis, embryo E18.CNhs11027.503-18G57.77
testis, neonate N00.CNhs11189.1300-22B79.74
testis, neonate N07.CNhs11222.726-26I47.94
testis, neonate N10.CNhs11204.763-44D96.71
testis, neonate N20.CNhs11110.839-18H313.05
testis, neonate N30.CNhs11130.1391-42E214.98
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D33.89
thymus, neonate N10.CNhs11194.748-24E44.03
thymus, neonate N20.CNhs11186.820-7A24.87
thymus, neonate N25.CNhs11125.1362-25G74.43
thymus, neonate N30.CNhs11132.1393-42G25.73
tongue, adult.CNhs10499.32-1B410.20
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E47.92
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A528.70
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D27.54
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F28.64
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.13
whole body, embryo E17.5.CNhs10513.490-9F98.87
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C611.67
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B48.81





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen
ectodermal cell1.20e-1344
neurectodermal cell1.20e-1344
neural cell1.97e-1343
neuron1.65e-1133
neuronal stem cell1.65e-1133
neuroblast1.65e-1133
electrically signaling cell1.65e-1133
electrically responsive cell2.54e-1039
electrically active cell2.54e-1039
CNS neuron (sensu Vertebrata)1.69e-0923
neuroblast (sensu Vertebrata)1.69e-0923

Uber anatomy
Ontology termp-valuen
central nervous system5.71e-3273
nervous system1.57e-2975
regional part of nervous system3.34e-2654
ectoderm-derived structure6.68e-2695
ectoderm6.68e-2695
presumptive ectoderm6.68e-2695
neural tube1.27e-2452
neural rod1.27e-2452
future spinal cord1.27e-2452
neural keel1.27e-2452
neurectoderm5.23e-2464
neural plate5.23e-2464
presumptive neural plate5.23e-2464
structure with developmental contribution from neural crest4.30e-2292
brain7.02e-2247
future brain7.02e-2247
ecto-epithelium1.45e-2173
regional part of brain2.58e-2146
anterior neural tube2.00e-1740
regional part of forebrain7.66e-1739
forebrain7.66e-1739
future forebrain7.66e-1739
pre-chordal neural plate5.05e-1649
gray matter6.64e-1634
brain grey matter1.67e-1329
regional part of telencephalon1.67e-1329
telencephalon1.67e-1329
anatomical conduit1.11e-12122
tube3.04e-12114
cerebral cortex4.58e-1121
cerebral hemisphere4.58e-1121
pallium4.58e-1121
regional part of cerebral cortex3.98e-0917
posterior neural tube7.67e-0812
chordal neural plate7.67e-0812