FFCP PHASE1:Mm9::chr2:29979997..29980029,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:29979997..29980029,-
|short_description=p2@Zer1
|description=CAGE_peak_2_at_Zer1_5end
|association_with_transcript=-23bp_to_ENSMUST00000044751,NM_178694,uc...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=227693 | |EntrezGene=227693 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80ZJ6,Q3U297 | |UniProt=Q80ZJ6,Q3U297 | ||
|association_with_transcript=-23bp_to_ENSMUST00000044751,NM_178694,uc008jbf.1,uc008jbg.1,uc008jbh.1_5end | |||
|cluster_id=chr2:29979997..29980029,- | |||
|description=CAGE_peak_2_at_Zer1_5end | |||
|id=chr2:29979997..29980029,- | |||
|ontology_enrichment_celltype=CL:0000221!1.20e-13!44;CL:0000133!1.20e-13!44;CL:0002319!1.97e-13!43;CL:0000540!1.65e-11!33;CL:0000047!1.65e-11!33;CL:0000031!1.65e-11!33;CL:0000404!1.65e-11!33;CL:0000055!1.68e-11!50;CL:0000393!2.54e-10!39;CL:0000211!2.54e-10!39;CL:0000117!1.69e-09!23;CL:0000337!1.69e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.20e-13,44;CL:0000133,1.20e-13,44;CL:0002319,1.97e-13,43;CL:0000540,1.65e-11,33;CL:0000047,1.65e-11,33;CL:0000031,1.65e-11,33;CL:0000404,1.65e-11,33;CL:0000393,2.54e-10,39;CL:0000211,2.54e-10,39;CL:0000117,1.69e-09,23;CL:0000337,1.69e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.72e-32!73;UBERON:0005743!5.72e-32!73;UBERON:0000073!1.57e-29!75;UBERON:0001016!1.57e-29!75;UBERON:0001049!1.27e-24!52;UBERON:0005068!1.27e-24!52;UBERON:0006241!1.27e-24!52;UBERON:0007135!1.27e-24!52;UBERON:0004121!1.30e-24!102;UBERON:0000924!1.30e-24!102;UBERON:0006601!1.30e-24!102;UBERON:0000955!4.21e-24!50;UBERON:0006238!4.21e-24!50;UBERON:0002616!1.59e-23!49;UBERON:0000033!9.14e-23!63;UBERON:0002346!4.58e-22!71;UBERON:0003075!4.58e-22!71;UBERON:0007284!4.58e-22!71;UBERON:0003080!2.00e-17!40;UBERON:0002780!7.67e-17!39;UBERON:0001890!7.67e-17!39;UBERON:0006240!7.67e-17!39;UBERON:0003056!5.05e-16!49;UBERON:0002020!6.64e-16!34;UBERON:0002791!1.67e-13!29;UBERON:0003528!1.67e-13!29;UBERON:0001893!1.67e-13!29;UBERON:0004111!1.11e-12!122;UBERON:0007811!1.20e-12!86;UBERON:0000025!3.04e-12!114;UBERON:0000153!1.21e-11!94;UBERON:0000956!4.59e-11!21;UBERON:0001869!4.59e-11!21;UBERON:0000203!4.59e-11!21;UBERON:0002619!3.98e-09!17;UBERON:0003076!7.67e-08!12;UBERON:0003057!7.67e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.71e-32,73;UBERON:0001016,1.57e-29,75;UBERON:0000073,3.34e-26,54;UBERON:0004121,6.68e-26,95;UBERON:0000924,6.68e-26,95;UBERON:0006601,6.68e-26,95;UBERON:0001049,1.27e-24,52;UBERON:0005068,1.27e-24,52;UBERON:0006241,1.27e-24,52;UBERON:0007135,1.27e-24,52;UBERON:0002346,5.23e-24,64;UBERON:0003075,5.23e-24,64;UBERON:0007284,5.23e-24,64;UBERON:0010314,4.30e-22,92;UBERON:0000955,7.02e-22,47;UBERON:0006238,7.02e-22,47;UBERON:0010371,1.45e-21,73;UBERON:0002616,2.58e-21,46;UBERON:0003080,2.00e-17,40;UBERON:0002780,7.66e-17,39;UBERON:0001890,7.66e-17,39;UBERON:0006240,7.66e-17,39;UBERON:0003056,5.05e-16,49;UBERON:0002020,6.64e-16,34;UBERON:0003528,1.67e-13,29;UBERON:0002791,1.67e-13,29;UBERON:0001893,1.67e-13,29;UBERON:0004111,1.11e-12,122;UBERON:0000025,3.04e-12,114;UBERON:0000956,4.58e-11,21;UBERON:0001869,4.58e-11,21;UBERON:0000203,4.58e-11,21;UBERON:0002619,3.98e-09,17;UBERON:0003076,7.67e-08,12;UBERON:0003057,7.67e-08,12 | |||
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| ||
|short_description=p2@Zer1 | |||
}} | }} |
Latest revision as of 12:51, 26 September 2015
Short description: | p2@Zer1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zer1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -23bp_to_ENSMUST00000044751, NM_178694, uc008jbf.1, uc008jbg.1, uc008jbh.1_5end |
EntrezGene: | Zer1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.20e-13 | 44 |
neurectodermal cell | 1.20e-13 | 44 |
neural cell | 1.97e-13 | 43 |
neuron | 1.65e-11 | 33 |
neuronal stem cell | 1.65e-11 | 33 |
neuroblast | 1.65e-11 | 33 |
electrically signaling cell | 1.65e-11 | 33 |
electrically responsive cell | 2.54e-10 | 39 |
electrically active cell | 2.54e-10 | 39 |
CNS neuron (sensu Vertebrata) | 1.69e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.69e-09 | 23 |