FFCP PHASE1:Mm9::chr4:137818104..137818173,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:137818104..137818173,+
|short_description=p3@Kif17
|description=CAGE_peak_3_at_Kif17_5end
|association_with_transcript=0bp_to_ENSMUST00000030539,NM_0011909...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16559 | |EntrezGene=16559 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q99PW8,A2AM72,Q3V365 | |UniProt=Q99PW8,A2AM72,Q3V365 | ||
|association_with_transcript=0bp_to_ENSMUST00000030539,NM_001190978,NM_010623,uc008vkp.1,uc008vkq.2,uc008vkr.2_5end | |||
|cluster_id=chr4:137818104..137818173,+ | |||
|description=CAGE_peak_3_at_Kif17_5end | |||
|id=chr4:137818104..137818173,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.26e-20!50;UBERON:0006238!3.26e-20!50;UBERON:0001049!3.29e-20!52;UBERON:0005068!3.29e-20!52;UBERON:0006241!3.29e-20!52;UBERON:0007135!3.29e-20!52;UBERON:0001017!1.61e-19!73;UBERON:0005743!1.61e-19!73;UBERON:0002616!1.66e-19!49;UBERON:0003080!3.16e-19!40;UBERON:0000073!1.56e-18!75;UBERON:0001016!1.56e-18!75;UBERON:0002780!2.28e-18!39;UBERON:0001890!2.28e-18!39;UBERON:0006240!2.28e-18!39;UBERON:0000033!8.00e-18!63;UBERON:0002020!7.76e-17!34;UBERON:0003056!3.46e-16!49;UBERON:0002791!1.11e-14!29;UBERON:0003528!1.11e-14!29;UBERON:0001893!1.11e-14!29;UBERON:0002346!1.37e-14!71;UBERON:0003075!1.37e-14!71;UBERON:0007284!1.37e-14!71;UBERON:0004121!1.85e-13!102;UBERON:0000924!1.85e-13!102;UBERON:0006601!1.85e-13!102;UBERON:0000956!8.46e-12!21;UBERON:0001869!8.46e-12!21;UBERON:0000203!8.46e-12!21;UBERON:0002619!2.33e-11!17;UBERON:0002021!9.53e-11!10;UBERON:0000411!9.53e-11!10;UBERON:0001950!9.53e-11!10;UBERON:0007811!9.22e-10!86;UBERON:0000153!2.18e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.66e-22,10;UBERON:0000411,1.66e-22,10;UBERON:0001950,1.66e-22,10;UBERON:0003080,2.31e-21,40;UBERON:0000073,1.65e-20,54;UBERON:0002780,1.37e-19,39;UBERON:0001890,1.37e-19,39;UBERON:0006240,1.37e-19,39;UBERON:0003528,5.46e-19,29;UBERON:0002791,5.46e-19,29;UBERON:0001893,5.46e-19,29;UBERON:0002020,4.48e-18,34;UBERON:0002616,4.88e-18,46;UBERON:0000955,1.44e-17,47;UBERON:0006238,1.44e-17,47;UBERON:0001049,2.08e-17,52;UBERON:0005068,2.08e-17,52;UBERON:0006241,2.08e-17,52;UBERON:0007135,2.08e-17,52;UBERON:0003056,1.11e-16,49;UBERON:0001017,1.72e-15,73;UBERON:0002619,2.62e-15,17;UBERON:0001016,6.00e-15,75;UBERON:0000956,1.01e-14,21;UBERON:0001869,1.01e-14,21;UBERON:0000203,1.01e-14,21;UBERON:0002346,2.46e-13,64;UBERON:0003075,2.46e-13,64;UBERON:0007284,2.46e-13,64;UBERON:0010371,1.59e-12,73;UBERON:0004121,8.84e-11,95;UBERON:0000924,8.84e-11,95;UBERON:0006601,8.84e-11,95;UBERON:0010314,5.11e-09,92 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0.258246646883153,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,40.9908658528156,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0.103689612308478,0.135005938331691,0,0.571301968807607,1.76694832761291,0.367472397644862,0,0,1.10115880999389,0.510749352340751,1.38245879930619,0.527545150920775,0.548925861614458,1.04182674111352,0,0,1.06958773443767,0.883885756421003,0,0.559198337475902,0,0,0,0,0,0,0,0,5.89866564553358,0,0,0,0.281686839553361,0,0,0,0,0,0,4.79572294820052,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,1.3481157546434,2.28750301409313,1.50785222535437,3.12883776346098,1.27857728665165,0.83115217823824,1.78465389374533,0,0.248813941220186,1.76905930903572,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,1.05144974282064,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0.476087281772027,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.642642632843614,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,1.02131881726136,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0.987294123612726,1.2178597964584,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0.169978429993855,0.69975726161829,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,306.6489586442,0,0.165458490457098,0.388902376688095,0.516639293910924,0.337912250981556,0.117357238645754,0.39061315453185,1.15345278868282,6.03960302065015,125.581082728429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,2.25900737046827,2.30162618253588,1.14579102687879,1.89038500578056,6.16574267793578,1.5107877947794,5.40018000185445,0.900642406448441,2.71885445390523,3.62432218226274,0,0,0,0,0,0,0,0,0,0.505394423527595,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0.749431733813838,0.467863216890817,0,0.382576664137687,0,0 | |phase1_expression=1.28119077683835,0,0,0,0,0,0,0.258246646883153,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,40.9908658528156,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0.103689612308478,0.135005938331691,0,0.571301968807607,1.76694832761291,0.367472397644862,0,0,1.10115880999389,0.510749352340751,1.38245879930619,0.527545150920775,0.548925861614458,1.04182674111352,0,0,1.06958773443767,0.883885756421003,0,0.559198337475902,0,0,0,0,0,0,0,0,5.89866564553358,0,0,0,0.281686839553361,0,0,0,0,0,0,4.79572294820052,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,1.3481157546434,2.28750301409313,1.50785222535437,3.12883776346098,1.27857728665165,0.83115217823824,1.78465389374533,0,0.248813941220186,1.76905930903572,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,1.05144974282064,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0.476087281772027,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.642642632843614,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,1.02131881726136,0,0.258717367565509,0.214337035031592,0.177340233642274,0,0.987294123612726,1.2178597964584,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0.169978429993855,0.69975726161829,0.138199973804424,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,306.6489586442,0,0.165458490457098,0.388902376688095,0.516639293910924,0.337912250981556,0.117357238645754,0.39061315453185,1.15345278868282,6.03960302065015,125.581082728429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,2.25900737046827,2.30162618253588,1.14579102687879,1.89038500578056,6.16574267793578,1.5107877947794,5.40018000185445,0.900642406448441,2.71885445390523,3.62432218226274,0,0,0,0,0,0,0,0,0,0.505394423527595,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0,0.532427418478012,0.238436189947321,0.290692833264657,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0.749431733813838,0.467863216890817,0,0.382576664137687,0,0 | ||
|short_description=p3@Kif17 | |||
}} | }} |
Latest revision as of 14:08, 26 September 2015
Short description: | p3@Kif17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kif17_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000030539, NM_001190978, NM_010623, uc008vkp.1, uc008vkq.2, uc008vkr.2_5end |
EntrezGene: | Kif17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.66e-22 | 10 |
visual cortex | 1.66e-22 | 10 |
neocortex | 1.66e-22 | 10 |
anterior neural tube | 2.31e-21 | 40 |
regional part of nervous system | 1.65e-20 | 54 |
regional part of forebrain | 1.37e-19 | 39 |
forebrain | 1.37e-19 | 39 |
future forebrain | 1.37e-19 | 39 |
brain grey matter | 5.46e-19 | 29 |
regional part of telencephalon | 5.46e-19 | 29 |
telencephalon | 5.46e-19 | 29 |
gray matter | 4.48e-18 | 34 |
regional part of brain | 4.88e-18 | 46 |
brain | 1.44e-17 | 47 |
future brain | 1.44e-17 | 47 |
neural tube | 2.08e-17 | 52 |
neural rod | 2.08e-17 | 52 |
future spinal cord | 2.08e-17 | 52 |
neural keel | 2.08e-17 | 52 |
pre-chordal neural plate | 1.11e-16 | 49 |
central nervous system | 1.72e-15 | 73 |
regional part of cerebral cortex | 2.62e-15 | 17 |
nervous system | 6.00e-15 | 75 |
cerebral cortex | 1.01e-14 | 21 |
cerebral hemisphere | 1.01e-14 | 21 |
pallium | 1.01e-14 | 21 |
neurectoderm | 2.46e-13 | 64 |
neural plate | 2.46e-13 | 64 |
presumptive neural plate | 2.46e-13 | 64 |
ecto-epithelium | 1.59e-12 | 73 |
ectoderm-derived structure | 8.84e-11 | 95 |
ectoderm | 8.84e-11 | 95 |
presumptive ectoderm | 8.84e-11 | 95 |
structure with developmental contribution from neural crest | 5.11e-09 | 92 |