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FFCP PHASE1:Mm9::chr7:31845114..31845162,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:31845114..31845162,+
|DHSsupport=NA
|short_description=p3@Lgi4
|DPIdataset=NA
|description=CAGE_peak_3_at_Lgi4_5end
|association_with_transcript=-423bp_to_ENSMUST00000169785_5end
|EntrezGene=243914
|EntrezGene=243914
|HGNC=
|HGNC=
|MCL_coexpression_id=3489
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-423bp_to_ENSMUST00000169785_5end
|cluster_id=chr7:31845114..31845162,+
|description=CAGE_peak_3_at_Lgi4_5end
|id=chr7:31845114..31845162,+
|ontology_enrichment_celltype=CL:0000221!1.12e-11!44;CL:0000133!1.12e-11!44;CL:0002319!4.09e-11!43;CL:0000540!6.02e-09!33;CL:0000047!6.02e-09!33;CL:0000031!6.02e-09!33;CL:0000404!6.02e-09!33;CL:0000055!1.00e-08!50;CL:0000107!1.14e-08!9;CL:0000393!4.88e-07!39;CL:0000211!4.88e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000221,3.42e-20,44;CL:0000133,3.42e-20,44;CL:0002319,4.73e-19,43;CL:0000540,4.51e-17,33;CL:0000047,4.51e-17,33;CL:0000031,4.51e-17,33;CL:0000404,4.51e-17,33;CL:0000107,1.20e-16,9;CL:0000393,1.46e-13,39;CL:0000211,1.46e-13,39;CL:0002321,4.87e-10,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.00e-22!102;UBERON:0000924!3.00e-22!102;UBERON:0006601!3.00e-22!102;UBERON:0000073!7.34e-21!75;UBERON:0001016!7.34e-21!75;UBERON:0001017!1.06e-19!73;UBERON:0005743!1.06e-19!73;UBERON:0002346!5.87e-12!71;UBERON:0003075!5.87e-12!71;UBERON:0007284!5.87e-12!71;UBERON:0000010!1.14e-09!11;UBERON:0000033!2.33e-09!63;UBERON:0001049!2.83e-09!52;UBERON:0005068!2.83e-09!52;UBERON:0006241!2.83e-09!52;UBERON:0007135!2.83e-09!52;UBERON:0000955!7.83e-09!50;UBERON:0006238!7.83e-09!50;UBERON:0002410!1.14e-08!9;UBERON:0002616!2.48e-08!49;UBERON:0002020!5.66e-08!34;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10;UBERON:0003076!9.52e-07!12;UBERON:0003057!9.52e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.44e-41,75;UBERON:0001017,9.73e-39,73;UBERON:0004121,1.15e-31,95;UBERON:0000924,1.15e-31,95;UBERON:0006601,1.15e-31,95;UBERON:0000073,9.20e-21,54;UBERON:0000010,9.10e-19,11;UBERON:0001049,2.51e-18,52;UBERON:0005068,2.51e-18,52;UBERON:0006241,2.51e-18,52;UBERON:0007135,2.51e-18,52;UBERON:0002346,9.25e-18,64;UBERON:0003075,9.25e-18,64;UBERON:0007284,9.25e-18,64;UBERON:0010371,5.99e-17,73;UBERON:0002410,1.20e-16,9;UBERON:0000955,7.85e-15,47;UBERON:0006238,7.85e-15,47;UBERON:0002020,3.37e-14,34;UBERON:0002021,5.14e-14,10;UBERON:0000411,5.14e-14,10;UBERON:0001950,5.14e-14,10;UBERON:0002616,8.13e-14,46;UBERON:0010314,2.04e-13,92;UBERON:0011216,4.95e-13,194;UBERON:0003528,6.01e-11,29;UBERON:0002791,6.01e-11,29;UBERON:0001893,6.01e-11,29;UBERON:0003080,1.80e-10,40;UBERON:0003076,9.14e-10,12;UBERON:0003057,9.14e-10,12;UBERON:0002780,1.67e-09,39;UBERON:0001890,1.67e-09,39;UBERON:0006240,1.67e-09,39;UBERON:0002619,3.60e-09,17;UBERON:0000956,1.84e-08,21;UBERON:0001869,1.84e-08,21;UBERON:0000203,1.84e-08,21;UBERON:0002950,7.01e-08,4;UBERON:0001891,7.01e-08,4;UBERON:0009616,7.01e-08,4;UBERON:0010286,7.01e-08,4;UBERON:0003056,1.15e-07,49;UBERON:0000011,6.23e-07,3
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0,0,0.194429899074283,0.55994568650145,2.87505128729943,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,3.59520132622086,4.2264013585371,0,0,0,5.42736870367227,2.65042249141936,0.122490799214954,0.0958454710182364,0,19.82085857989,14.300981865541,15.2070467923681,0,0.0914876436024097,0,15.355064945076,16.8828783009504,15.4326230254578,1.76777151284201,2.70506193518296,0.372798891650601,1.59025005999687,5.06329452715463,0,0,0,0,0,0,0.702222100658759,0,0,0,7.60554466794075,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0.346970653532272,0,0.691846491768175,0.452167921657868,1.17588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,1.86391761218122,16.9812862266697,11.7290155815535,0,0,0,0,13.6309481858389,13.2675174817402,0.753926112677186,10.081810571152,5.11430914660661,15.1685272528479,7.78758062725237,0.101839363850316,0.373220911830279,0,0.420883711772948,0,0,0,0,0.272145996605311,0.640568601424249,0.281105173679186,0.776110112217047,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.324275238183423,0.584799949701329,0.219550115291051,0.268412837520744,14.930586348053,0,0,0.528901133327089,0.213288250535234,0.232236671860439,0.515469845288373,0,0.22237804384487,0.190225626112559,0,0.329397909448022,1.25667604400135,0.397912944082302,0,0,0,0.597423819763102,0,0.228497025219458,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.318909537314974,0.163863314715738,0.690739927463582,0,0,0,0,0,14.4495530989013,10.5490517932983,0,0.504941854408746,10.7272794601527,14.4462335389756,25.2045375347375,28.6762557543062,28.0726329343817,30.2891887944051,21.0501564870945,22.503701059171,15.8115111178609,8.35435422696698,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0.98931751764888,0.161464426695906,0.120625849856312,0.477489376012546,0.656563598980245,0.582961673259701,20.5822085231666,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.836353184057875,1.52853794622324,1.61837215661785,1.23980183588004,0.523511883968059,0.388844919875379,0,0.56369293868419,0,0,0.194451188344048,0,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,0.965947970160952,0,0,0.428736758158132,0,5.0827665835536,5.06357760157895,2.29158205375759,6.35856774671644,8.90607275701835,3.0215755895588,8.10027000278167,9.00642406448441,10.4222754066367,4.14208249401456,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0.505394423527595,0,0,0.0936415074698824,0.256100609619477,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0,0.238436189947321,0.581385666529314,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.407412341537585,0,0.474540072496697,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.57386499620653,0.661774257358546,0.927471342481686
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0,0,0.194429899074283,0.55994568650145,2.87505128729943,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,3.59520132622086,4.2264013585371,0,0,0,5.42736870367227,2.65042249141936,0.122490799214954,0.0958454710182364,0,19.82085857989,14.300981865541,15.2070467923681,0,0.0914876436024097,0,15.355064945076,16.8828783009504,15.4326230254578,1.76777151284201,2.70506193518296,0.372798891650601,1.59025005999687,5.06329452715463,0,0,0,0,0,0,0.702222100658759,0,0,0,7.60554466794075,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0.346970653532272,0,0.691846491768175,0.452167921657868,1.17588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,1.86391761218122,16.9812862266697,11.7290155815535,0,0,0,0,13.6309481858389,13.2675174817402,0.753926112677186,10.081810571152,5.11430914660661,15.1685272528479,7.78758062725237,0.101839363850316,0.373220911830279,0,0.420883711772948,0,0,0,0,0.272145996605311,0.640568601424249,0.281105173679186,0.776110112217047,0,0,0,0,0.278047249225598,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.324275238183423,0.584799949701329,0.219550115291051,0.268412837520744,14.930586348053,0,0,0.528901133327089,0.213288250535234,0.232236671860439,0.515469845288373,0,0.22237804384487,0.190225626112559,0,0.329397909448022,1.25667604400135,0.397912944082302,0,0,0,0.597423819763102,0,0.228497025219458,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.318909537314974,0.163863314715738,0.690739927463582,0,0,0,0,0,14.4495530989013,10.5490517932983,0,0.504941854408746,10.7272794601527,14.4462335389756,25.2045375347375,28.6762557543062,28.0726329343817,30.2891887944051,21.0501564870945,22.503701059171,15.8115111178609,8.35435422696698,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0.98931751764888,0.161464426695906,0.120625849856312,0.477489376012546,0.656563598980245,0.582961673259701,20.5822085231666,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.836353184057875,1.52853794622324,1.61837215661785,1.23980183588004,0.523511883968059,0.388844919875379,0,0.56369293868419,0,0,0.194451188344048,0,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,0.965947970160952,0,0,0.428736758158132,0,5.0827665835536,5.06357760157895,2.29158205375759,6.35856774671644,8.90607275701835,3.0215755895588,8.10027000278167,9.00642406448441,10.4222754066367,4.14208249401456,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0.505394423527595,0,0,0.0936415074698824,0.256100609619477,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0,0.238436189947321,0.581385666529314,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.407412341537585,0,0.474540072496697,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.57386499620653,0.661774257358546,0.927471342481686
|short_description=p3@Lgi4
}}
}}

Latest revision as of 15:41, 26 September 2015

Short description:p3@Lgi4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lgi4_5end
Coexpression cluster:MCL_coexpression_mm9:3489
Association with transcript: -423bp_to_ENSMUST00000169785_5end
EntrezGene:Lgi4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lgi4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F95.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.61
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I211.73
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.63
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D510.08
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F215.17
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E814.93
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.45
medulla oblongata, neonate N30.CNhs11200.1396-42A310.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.45
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E325.20
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D728.68
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D828.07
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D930.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.50
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C920.58
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell3.42e-2044
neurectodermal cell3.42e-2044
neural cell4.73e-1943
neuron4.51e-1733
neuronal stem cell4.51e-1733
neuroblast4.51e-1733
electrically signaling cell4.51e-1733
autonomic neuron1.20e-169
electrically responsive cell1.46e-1339
electrically active cell1.46e-1339
embryonic cell4.87e-1070

Uber anatomy
Ontology termp-valuen
nervous system3.44e-4175
central nervous system9.73e-3973
ectoderm-derived structure1.15e-3195
ectoderm1.15e-3195
presumptive ectoderm1.15e-3195
regional part of nervous system9.20e-2154
peripheral nervous system9.10e-1911
neural tube2.51e-1852
neural rod2.51e-1852
future spinal cord2.51e-1852
neural keel2.51e-1852
neurectoderm9.25e-1864
neural plate9.25e-1864
presumptive neural plate9.25e-1864
ecto-epithelium5.99e-1773
autonomic nervous system1.20e-169
brain7.85e-1547
future brain7.85e-1547
gray matter3.37e-1434
occipital lobe5.14e-1410
visual cortex5.14e-1410
neocortex5.14e-1410
regional part of brain8.13e-1446
structure with developmental contribution from neural crest2.04e-1392
organ system subdivision4.95e-13194
brain grey matter6.01e-1129
regional part of telencephalon6.01e-1129
telencephalon6.01e-1129
anterior neural tube1.80e-1040
posterior neural tube9.14e-1012
chordal neural plate9.14e-1012
regional part of forebrain1.67e-0939
forebrain1.67e-0939
future forebrain1.67e-0939
regional part of cerebral cortex3.60e-0917
cerebral cortex1.84e-0821
cerebral hemisphere1.84e-0821
pallium1.84e-0821
regional part of midbrain7.01e-084
midbrain7.01e-084
presumptive midbrain7.01e-084
midbrain neural tube7.01e-084
pre-chordal neural plate1.15e-0749
parasympathetic nervous system6.23e-073
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