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FFCP PHASE1:Mm9::chr8:48374677..48374703,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:48374677..48374703,-
|DHSsupport=NA
|short_description=p4@Stox2
|DPIdataset=NA
|description=CAGE_peak_4_at_Stox2_5end
|association_with_transcript=52bp_to_ENSMUST00000079195,NM_001114311,uc009lqw.2,uc009lqx.2_5end
|EntrezGene=71069
|EntrezGene=71069
|HGNC=
|HGNC=
|MCL_coexpression_id=3678
|TSSclassifier=NA
|UniProt=Q499E5
|UniProt=Q499E5
|association_with_transcript=52bp_to_ENSMUST00000079195,NM_001114311,uc009lqw.2,uc009lqx.2_5end
|cluster_id=chr8:48374677..48374703,-
|description=CAGE_peak_4_at_Stox2_5end
|id=chr8:48374677..48374703,-
|ontology_enrichment_celltype=CL:0000221!4.66e-15!44;CL:0000133!4.66e-15!44;CL:0002319!5.00e-15!43;CL:0000540!9.23e-15!33;CL:0000047!9.23e-15!33;CL:0000031!9.23e-15!33;CL:0000404!9.23e-15!33;CL:0000117!4.08e-14!23;CL:0000337!4.08e-14!23;CL:0000393!2.06e-12!39;CL:0000211!2.06e-12!39;CL:0000055!2.17e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.57e-19,23;CL:0000337,1.57e-19,23;CL:0000540,1.39e-17,33;CL:0000047,1.39e-17,33;CL:0000031,1.39e-17,33;CL:0000404,1.39e-17,33;CL:0002319,5.07e-17,43;CL:0000221,2.38e-16,44;CL:0000133,2.38e-16,44;CL:0000393,3.13e-13,39;CL:0000211,3.13e-13,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.41e-22!73;UBERON:0005743!1.41e-22!73;UBERON:0000073!7.70e-22!75;UBERON:0001016!7.70e-22!75;UBERON:0004121!1.99e-20!102;UBERON:0000924!1.99e-20!102;UBERON:0006601!1.99e-20!102;UBERON:0002346!3.76e-17!71;UBERON:0003075!3.76e-17!71;UBERON:0007284!3.76e-17!71;UBERON:0000033!4.26e-16!63;UBERON:0001049!4.89e-15!52;UBERON:0005068!4.89e-15!52;UBERON:0006241!4.89e-15!52;UBERON:0007135!4.89e-15!52;UBERON:0003056!1.11e-13!49;UBERON:0000955!3.85e-13!50;UBERON:0006238!3.85e-13!50;UBERON:0002616!1.18e-12!49;UBERON:0002020!1.36e-11!34;UBERON:0003080!2.80e-10!40;UBERON:0002780!8.00e-10!39;UBERON:0001890!8.00e-10!39;UBERON:0006240!8.00e-10!39;UBERON:0002791!1.90e-08!29;UBERON:0003528!1.90e-08!29;UBERON:0001893!1.90e-08!29;UBERON:0000153!2.48e-08!94;UBERON:0000468!6.93e-08!333;UBERON:0007811!8.96e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.77e-26,73;UBERON:0001016,4.88e-25,75;UBERON:0004121,1.57e-23,95;UBERON:0000924,1.57e-23,95;UBERON:0006601,1.57e-23,95;UBERON:0002346,2.66e-23,64;UBERON:0003075,2.66e-23,64;UBERON:0007284,2.66e-23,64;UBERON:0000073,4.73e-20,54;UBERON:0010371,4.94e-19,73;UBERON:0001049,7.59e-19,52;UBERON:0005068,7.59e-19,52;UBERON:0006241,7.59e-19,52;UBERON:0007135,7.59e-19,52;UBERON:0003056,1.25e-15,49;UBERON:0002020,1.25e-14,34;UBERON:0010314,1.77e-14,92;UBERON:0000955,2.40e-14,47;UBERON:0006238,2.40e-14,47;UBERON:0002616,1.08e-13,46;UBERON:0003080,6.81e-12,40;UBERON:0002780,2.81e-11,39;UBERON:0001890,2.81e-11,39;UBERON:0006240,2.81e-11,39;UBERON:0003528,2.84e-10,29;UBERON:0002791,2.84e-10,29;UBERON:0001893,2.84e-10,29;UBERON:0003076,3.03e-08,12;UBERON:0003057,3.03e-08,12;UBERON:0002240,2.38e-07,6;UBERON:0005174,2.38e-07,6;UBERON:0001137,2.38e-07,6;UBERON:0002420,2.55e-07,8;UBERON:0007245,2.55e-07,8;UBERON:0010009,2.55e-07,8;UBERON:0010011,2.55e-07,8;UBERON:0000454,2.55e-07,8
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.202753862439029,0.367093504323363,0,2.39827672018491,0.659058548203415,1.36100929351998,0.699932108126813,2.87505128729943,0,0,0,0.257259436035947,0.573066879877513,0,4.85559506063035,5.28990979272033,6.33831403506179,0.338844532069132,0.889294796111139,0,0,0,1.79760066311043,4.2264013585371,2.28117147078651,2.16009501330705,2.52389953621658,4.85606673486466,3.97563373712904,1.83736198822431,2.1086003624012,2.75765635983006,3.30347642998166,1.78762273319263,2.30409799884365,3.56092976871523,3.56801810049398,3.64639359389732,2.51264699101243,2.25105044012672,1.98637722109853,10.3120004915784,6.26435395516053,8.01517617048792,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,1.56136794089522,0,0,0.452167921657868,0.940709657085638,0,0,0.433798070759735,0.884610551949874,0.808834249737046,0.220841518460394,0.484875253135222,0,1.17112318804619,1.04723353406728,0,0,0,0,2.54644086988199,2.28750301409313,2.89005009859588,0.521472960576829,0.255715457330331,1.66230435647648,1.1356888414743,0.81471491080253,0.497627882440372,0.252722758433675,0.210441855886474,2.99277018814219,0.919608417733892,2.16074555766419,3.46621081022145,2.65342346690179,3.20284300712124,3.27956035959051,2.58703370739016,3.01795190105979,3.02569728268511,2.99116911078713,1.97276159184817,1.39023624612799,1.74126083261083,0.411564272815887,1.39323986772945,0,0,0,1.44988040774851,1.40715635988658,0.540186184383045,0.946978942340841,0.983821158737019,0.617068451549513,0.697601834251224,0.804820204198858,1.40118410840603,0.16455984991348,0,0.324275238183423,0.146199987425332,0,0.402619256281115,0.420579897128254,2.05809224758569,0,0,1.06644125267617,1.39342003116263,1.28867461322093,0.605050573870028,2.66853652613844,0.760902504450237,0,0.329397909448022,0.754005626400808,0.994782360205754,0,0.898819408654221,0,0.199141273254367,0.758671603812327,0.456994050438915,0,0.610953983535943,0.775809948670503,0.771494018793504,0.252946148497029,0,0,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,0.488894929326078,0.848725428875941,0,1.17254380209271,0.238043640886014,0.975668239288994,0.945810864637146,1.55025282754142,1.75400245523236,0.327726629431476,0.345369963731791,0,0,0,0,0,2.56880943980467,2.22702204525186,0,0.504941854408746,1.26203287766503,0.780877488593277,1.93881057959519,1.91175038362042,0.222798674082394,1.13230612315533,0.809621403349789,1.46127928955656,0.790575555893047,2.57057053137446,0.851640511249612,0.712262414669021,0.81443479676788,0.989820737835213,0,0.485561272309963,0.604647113929502,0,0,0,1.03371317267288,0,0,0.632073515871632,0,0,1.02131881726136,2.34079422240703,1.55230420539305,1.28602221018955,1.59606210278046,0.178368817602071,0.493647061806363,0.608929898229199,0,0.42366414172764,0.882113592219848,0.16488625294148,0.968786560175433,0.422190474497091,0.358117032009409,0.492422699235184,0.874442509889552,3.33765543618917,0,0.412773735926445,0,0,0,0,0,0,0,0,3.47969592939249,0.609958401380546,0.648032044930808,1.04544148007234,0.655087691238533,0.404593039154462,0.909188012978695,0,0.259229946583586,0,0,7.62534384824292,5.46013018508422,5.44463327363333,4.90807329215378,3.71703476079712,2.58185925020659,1.3020438484395,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.453460767230423,0,0.0897138566094757,0,0.19318959403219,0,0,0,1.00314420807073,1.12950368523413,2.76195141904306,0.572895513439397,1.20297227640581,0,0,1.35004500046361,1.80128481289688,2.71885445390523,1.55328093525546,2.49089634202024,3.99024873401031,1.87806966329548,1.45864030240976,1.88651846365184,1.65459157605013,0,1.03017528619447,1.28367683836726,0.252697211763798,0.50695859978048,1.69763707247469,0.655490552289177,1.08842759088278,0.631790158511746,0.476293691283074,1.73826488917283,1.35036454324594,1.23625770240992,0.735994600671987,1.71434626192708,1.06485483695602,0.715308569841963,1.30811774969096,1.12931256498397,0.592302255241736,0.73171189149109,0.263069711437843,1.35804113845862,1.12228454331548,0.711810108745045,0.689531376628944,0.409231043169689,0.309873682371932,0.964533054905707,2.74791635731741,0,1.07435527024149,1.3390183244819,0.441182838239031,0.231867835620421
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.202753862439029,0.367093504323363,0,2.39827672018491,0.659058548203415,1.36100929351998,0.699932108126813,2.87505128729943,0,0,0,0.257259436035947,0.573066879877513,0,4.85559506063035,5.28990979272033,6.33831403506179,0.338844532069132,0.889294796111139,0,0,0,1.79760066311043,4.2264013585371,2.28117147078651,2.16009501330705,2.52389953621658,4.85606673486466,3.97563373712904,1.83736198822431,2.1086003624012,2.75765635983006,3.30347642998166,1.78762273319263,2.30409799884365,3.56092976871523,3.56801810049398,3.64639359389732,2.51264699101243,2.25105044012672,1.98637722109853,10.3120004915784,6.26435395516053,8.01517617048792,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,1.56136794089522,0,0,0.452167921657868,0.940709657085638,0,0,0.433798070759735,0.884610551949874,0.808834249737046,0.220841518460394,0.484875253135222,0,1.17112318804619,1.04723353406728,0,0,0,0,2.54644086988199,2.28750301409313,2.89005009859588,0.521472960576829,0.255715457330331,1.66230435647648,1.1356888414743,0.81471491080253,0.497627882440372,0.252722758433675,0.210441855886474,2.99277018814219,0.919608417733892,2.16074555766419,3.46621081022145,2.65342346690179,3.20284300712124,3.27956035959051,2.58703370739016,3.01795190105979,3.02569728268511,2.99116911078713,1.97276159184817,1.39023624612799,1.74126083261083,0.411564272815887,1.39323986772945,0,0,0,1.44988040774851,1.40715635988658,0.540186184383045,0.946978942340841,0.983821158737019,0.617068451549513,0.697601834251224,0.804820204198858,1.40118410840603,0.16455984991348,0,0.324275238183423,0.146199987425332,0,0.402619256281115,0.420579897128254,2.05809224758569,0,0,1.06644125267617,1.39342003116263,1.28867461322093,0.605050573870028,2.66853652613844,0.760902504450237,0,0.329397909448022,0.754005626400808,0.994782360205754,0,0.898819408654221,0,0.199141273254367,0.758671603812327,0.456994050438915,0,0.610953983535943,0.775809948670503,0.771494018793504,0.252946148497029,0,0,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.13694847062291,0.488894929326078,0.848725428875941,0,1.17254380209271,0.238043640886014,0.975668239288994,0.945810864637146,1.55025282754142,1.75400245523236,0.327726629431476,0.345369963731791,0,0,0,0,0,2.56880943980467,2.22702204525186,0,0.504941854408746,1.26203287766503,0.780877488593277,1.93881057959519,1.91175038362042,0.222798674082394,1.13230612315533,0.809621403349789,1.46127928955656,0.790575555893047,2.57057053137446,0.851640511249612,0.712262414669021,0.81443479676788,0.989820737835213,0,0.485561272309963,0.604647113929502,0,0,0,1.03371317267288,0,0,0.632073515871632,0,0,1.02131881726136,2.34079422240703,1.55230420539305,1.28602221018955,1.59606210278046,0.178368817602071,0.493647061806363,0.608929898229199,0,0.42366414172764,0.882113592219848,0.16488625294148,0.968786560175433,0.422190474497091,0.358117032009409,0.492422699235184,0.874442509889552,3.33765543618917,0,0.412773735926445,0,0,0,0,0,0,0,0,3.47969592939249,0.609958401380546,0.648032044930808,1.04544148007234,0.655087691238533,0.404593039154462,0.909188012978695,0,0.259229946583586,0,0,7.62534384824292,5.46013018508422,5.44463327363333,4.90807329215378,3.71703476079712,2.58185925020659,1.3020438484395,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.453460767230423,0,0.0897138566094757,0,0.19318959403219,0,0,0,1.00314420807073,1.12950368523413,2.76195141904306,0.572895513439397,1.20297227640581,0,0,1.35004500046361,1.80128481289688,2.71885445390523,1.55328093525546,2.49089634202024,3.99024873401031,1.87806966329548,1.45864030240976,1.88651846365184,1.65459157605013,0,1.03017528619447,1.28367683836726,0.252697211763798,0.50695859978048,1.69763707247469,0.655490552289177,1.08842759088278,0.631790158511746,0.476293691283074,1.73826488917283,1.35036454324594,1.23625770240992,0.735994600671987,1.71434626192708,1.06485483695602,0.715308569841963,1.30811774969096,1.12931256498397,0.592302255241736,0.73171189149109,0.263069711437843,1.35804113845862,1.12228454331548,0.711810108745045,0.689531376628944,0.409231043169689,0.309873682371932,0.964533054905707,2.74791635731741,0,1.07435527024149,1.3390183244819,0.441182838239031,0.231867835620421
|short_description=p4@Stox2
}}
}}

Latest revision as of 14:51, 25 September 2015

Short description:p4@Stox2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Stox2_5end
Coexpression cluster:MCL_coexpression_mm9:3678
Association with transcript: 52bp_to_ENSMUST00000079195, NM_001114311, uc009lqw.2, uc009lqx.2_5end
EntrezGene:Stox2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Stox2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F57.63
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G55.44
testis, embryo E17.CNhs11029.486-18I54.91
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.57e-1923
neuroblast (sensu Vertebrata)1.57e-1923
neuron1.39e-1733
neuronal stem cell1.39e-1733
neuroblast1.39e-1733
electrically signaling cell1.39e-1733
neural cell5.07e-1743
ectodermal cell2.38e-1644
neurectodermal cell2.38e-1644
electrically responsive cell3.13e-1339
electrically active cell3.13e-1339

Uber anatomy
Ontology termp-valuen
central nervous system2.77e-2673
nervous system4.88e-2575
ectoderm-derived structure1.57e-2395
ectoderm1.57e-2395
presumptive ectoderm1.57e-2395
neurectoderm2.66e-2364
neural plate2.66e-2364
presumptive neural plate2.66e-2364
regional part of nervous system4.73e-2054
ecto-epithelium4.94e-1973
neural tube7.59e-1952
neural rod7.59e-1952
future spinal cord7.59e-1952
neural keel7.59e-1952
pre-chordal neural plate1.25e-1549
gray matter1.25e-1434
structure with developmental contribution from neural crest1.77e-1492
brain2.40e-1447
future brain2.40e-1447
regional part of brain1.08e-1346
anterior neural tube6.81e-1240
regional part of forebrain2.81e-1139
forebrain2.81e-1139
future forebrain2.81e-1139
brain grey matter2.84e-1029
regional part of telencephalon2.84e-1029
telencephalon2.84e-1029
posterior neural tube3.03e-0812
chordal neural plate3.03e-0812
spinal cord2.38e-076
dorsal region element2.38e-076
dorsum2.38e-076
basal ganglion2.55e-078
nuclear complex of neuraxis2.55e-078
aggregate regional part of brain2.55e-078
collection of basal ganglia2.55e-078
cerebral subcortex2.55e-078
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