FFCP PHASE1:Mm9::chr8:74009853..74009880,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:74009853..74009880,-
|short_description=p1@Ano8
|description=CAGE_peak_1_at_Ano8_5end
|association_with_transcript=85bp_to_ENSMUST00000093450,NM_001164679,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=382014 | |EntrezGene=382014 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PB70 | |UniProt=Q6PB70 | ||
|association_with_transcript=85bp_to_ENSMUST00000093450,NM_001164679,uc009mdl.2,uc009mdm.2_5end | |||
|cluster_id=chr8:74009853..74009880,- | |||
|description=CAGE_peak_1_at_Ano8_5end | |||
|id=chr8:74009853..74009880,- | |||
|ontology_enrichment_celltype=CL:0000540!6.18e-16!33;CL:0000047!6.18e-16!33;CL:0000031!6.18e-16!33;CL:0000404!6.18e-16!33;CL:0000221!1.71e-15!44;CL:0000133!1.71e-15!44;CL:0002319!4.77e-15!43;CL:0000117!3.98e-14!23;CL:0000337!3.98e-14!23;CL:0000393!1.65e-13!39;CL:0000211!1.65e-13!39;CL:0000055!1.08e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.00e-16,33;CL:0000047,5.00e-16,33;CL:0000031,5.00e-16,33;CL:0000404,5.00e-16,33;CL:0000221,1.02e-15,44;CL:0000133,1.02e-15,44;CL:0002319,2.87e-15,43;CL:0000117,3.31e-14,23;CL:0000337,3.31e-14,23;CL:0000393,1.40e-13,39;CL:0000211,1.40e-13,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.71e-35!102;UBERON:0000924!9.71e-35!102;UBERON:0006601!9.71e-35!102;UBERON:0000073!1.73e-32!75;UBERON:0001016!1.73e-32!75;UBERON:0001017!5.23e-32!73;UBERON:0005743!5.23e-32!73;UBERON:0000033!2.16e-29!63;UBERON:0002346!2.69e-29!71;UBERON:0003075!2.69e-29!71;UBERON:0007284!2.69e-29!71;UBERON:0001049!1.75e-26!52;UBERON:0005068!1.75e-26!52;UBERON:0006241!1.75e-26!52;UBERON:0007135!1.75e-26!52;UBERON:0000955!3.82e-25!50;UBERON:0006238!3.82e-25!50;UBERON:0002616!1.07e-24!49;UBERON:0003056!9.41e-24!49;UBERON:0003080!1.43e-20!40;UBERON:0000153!4.43e-20!94;UBERON:0002780!5.42e-20!39;UBERON:0001890!5.42e-20!39;UBERON:0006240!5.42e-20!39;UBERON:0007811!8.17e-20!86;UBERON:0002020!2.11e-18!34;UBERON:0002791!7.69e-16!29;UBERON:0003528!7.69e-16!29;UBERON:0001893!7.69e-16!29;UBERON:0000956!1.97e-11!21;UBERON:0001869!1.97e-11!21;UBERON:0000203!1.97e-11!21;UBERON:0002619!8.32e-09!17;UBERON:0004111!6.88e-08!122;UBERON:0000025!9.20e-08!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.39e-35,95;UBERON:0000924,1.39e-35,95;UBERON:0006601,1.39e-35,95;UBERON:0001016,7.56e-33,75;UBERON:0001017,2.30e-32,73;UBERON:0002346,1.27e-30,64;UBERON:0003075,1.27e-30,64;UBERON:0007284,1.27e-30,64;UBERON:0010371,1.61e-30,73;UBERON:0000073,1.08e-27,54;UBERON:0001049,1.21e-26,52;UBERON:0005068,1.21e-26,52;UBERON:0006241,1.21e-26,52;UBERON:0007135,1.21e-26,52;UBERON:0010314,1.25e-25,92;UBERON:0003056,6.78e-24,49;UBERON:0000955,7.14e-24,47;UBERON:0006238,7.14e-24,47;UBERON:0002616,1.98e-23,46;UBERON:0003080,1.08e-20,40;UBERON:0002780,4.13e-20,39;UBERON:0001890,4.13e-20,39;UBERON:0006240,4.13e-20,39;UBERON:0002020,1.65e-18,34;UBERON:0003528,6.22e-16,29;UBERON:0002791,6.22e-16,29;UBERON:0001893,6.22e-16,29;UBERON:0000956,1.71e-11,21;UBERON:0001869,1.71e-11,21;UBERON:0000203,1.71e-11,21;UBERON:0002619,7.47e-09,17;UBERON:0004111,6.71e-08,122;UBERON:0000025,9.00e-08,114 | |||
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| ||
|short_description=p1@Ano8 | |||
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Latest revision as of 18:16, 25 September 2015
Short description: | p1@Ano8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ano8_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 85bp_to_ENSMUST00000093450, NM_001164679, uc009mdl.2, uc009mdm.2_5end |
EntrezGene: | Ano8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.00e-16 | 33 |
neuronal stem cell | 5.00e-16 | 33 |
neuroblast | 5.00e-16 | 33 |
electrically signaling cell | 5.00e-16 | 33 |
ectodermal cell | 1.02e-15 | 44 |
neurectodermal cell | 1.02e-15 | 44 |
neural cell | 2.87e-15 | 43 |
CNS neuron (sensu Vertebrata) | 3.31e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.31e-14 | 23 |
electrically responsive cell | 1.40e-13 | 39 |
electrically active cell | 1.40e-13 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.39e-35 | 95 |
ectoderm | 1.39e-35 | 95 |
presumptive ectoderm | 1.39e-35 | 95 |
nervous system | 7.56e-33 | 75 |
central nervous system | 2.30e-32 | 73 |
neurectoderm | 1.27e-30 | 64 |
neural plate | 1.27e-30 | 64 |
presumptive neural plate | 1.27e-30 | 64 |
ecto-epithelium | 1.61e-30 | 73 |
regional part of nervous system | 1.08e-27 | 54 |
neural tube | 1.21e-26 | 52 |
neural rod | 1.21e-26 | 52 |
future spinal cord | 1.21e-26 | 52 |
neural keel | 1.21e-26 | 52 |
structure with developmental contribution from neural crest | 1.25e-25 | 92 |
pre-chordal neural plate | 6.78e-24 | 49 |
brain | 7.14e-24 | 47 |
future brain | 7.14e-24 | 47 |
regional part of brain | 1.98e-23 | 46 |
anterior neural tube | 1.08e-20 | 40 |
regional part of forebrain | 4.13e-20 | 39 |
forebrain | 4.13e-20 | 39 |
future forebrain | 4.13e-20 | 39 |
gray matter | 1.65e-18 | 34 |
brain grey matter | 6.22e-16 | 29 |
regional part of telencephalon | 6.22e-16 | 29 |
telencephalon | 6.22e-16 | 29 |
cerebral cortex | 1.71e-11 | 21 |
cerebral hemisphere | 1.71e-11 | 21 |
pallium | 1.71e-11 | 21 |
regional part of cerebral cortex | 7.47e-09 | 17 |
anatomical conduit | 6.71e-08 | 122 |
tube | 9.00e-08 | 114 |