FFCP PHASE1:Hg19::chr10:50323510..50323541,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:50323510..50323541,- to FFCP PHASE1:Hg19::chr10:50323510..50323541,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=196740 | |EntrezGene=196740 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26470 | |HGNC=26470 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IW00 | |UniProt=Q8IW00 | ||
|association_with_transcript=12bp_to_ENST00000298454,ENST00000332853_5end | |||
|cluster_id=chr10:50323510..50323541,- | |||
|description=CAGE_peak_2_at_VSTM4_5end | |||
|id=chr10:50323510..50323541,- | |||
|ontology_enrichment_celltype=CL:0000057!4.03e-15!75;CL:0000055!5.03e-14!180;CL:0002620!1.91e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.58e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.61e-14,76;CL:0002620,3.88e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.50e-28!115;UBERON:0000475!8.78e-15!365;UBERON:0001049!7.74e-14!57;UBERON:0005068!7.74e-14!57;UBERON:0006241!7.74e-14!57;UBERON:0007135!7.74e-14!57;UBERON:0002616!1.40e-13!59;UBERON:0005743!1.95e-13!86;UBERON:0001017!4.73e-13!82;UBERON:0003075!4.77e-12!86;UBERON:0007284!4.77e-12!86;UBERON:0000073!7.97e-12!94;UBERON:0001016!7.97e-12!94;UBERON:0000955!8.51e-12!69;UBERON:0006238!8.51e-12!69;UBERON:0002346!9.74e-12!90;UBERON:0000153!2.67e-10!129;UBERON:0007811!2.67e-10!129;UBERON:0000033!8.14e-10!123;UBERON:0004121!2.08e-09!169;UBERON:0000924!2.45e-09!173;UBERON:0006601!2.45e-09!173;UBERON:0003080!7.07e-09!42;UBERON:0000481!1.78e-08!347;UBERON:0002780!1.87e-08!41;UBERON:0001890!1.87e-08!41;UBERON:0006240!1.87e-08!41;UBERON:0001893!8.32e-08!34;UBERON:0002020!1.59e-07!34;UBERON:0003528!1.59e-07!34;UBERON:0002791!2.24e-07!33;UBERON:0002199!2.83e-07!45;UBERON:0002416!2.83e-07!45;UBERON:0000914!3.87e-07!83;UBERON:0002329!3.87e-07!83;UBERON:0003077!3.87e-07!83;UBERON:0003059!3.87e-07!83;UBERON:0007282!3.87e-07!83;UBERON:0009618!3.87e-07!83;UBERON:0007285!3.87e-07!83;UBERON:0001869!5.98e-07!32;UBERON:0000479!6.86e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.02e-10;114!UBERON:0001893;5.18e-08;34!UBERON:0000073;6.17e-08;53!UBERON:0002616;6.17e-08;53!UBERON:0002780;1.39e-07;41!UBERON:0001890;1.39e-07;41!UBERON:0001950;1.48e-07;20!UBERON:0002619;2.32e-07;22!UBERON:0002791;2.36e-07;32!UBERON:0001869;3.34e-07;32!UBERON:0003528;3.48e-07;34!UBERON:0002020;3.48e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.15e-36,114;UBERON:0001049,2.02e-15,56;UBERON:0005068,2.02e-15,56;UBERON:0006241,2.02e-15,56;UBERON:0007135,2.02e-15,56;UBERON:0010314,8.23e-15,132;UBERON:0000073,1.30e-13,53;UBERON:0002616,1.30e-13,53;UBERON:0001017,1.18e-12,81;UBERON:0000955,1.65e-12,68;UBERON:0006238,1.65e-12,68;UBERON:0001016,4.18e-11,89;UBERON:0003075,7.52e-11,82;UBERON:0007284,7.52e-11,82;UBERON:0000479,3.99e-10,773;UBERON:0002346,4.40e-10,86;UBERON:0002780,8.24e-10,41;UBERON:0001890,8.24e-10,41;UBERON:0003080,8.24e-10,41;UBERON:0006240,8.24e-10,41;UBERON:0001893,2.80e-09,34;UBERON:0010371,3.56e-09,104;UBERON:0003528,6.30e-09,34;UBERON:0002020,6.30e-09,34;UBERON:0004121,2.40e-08,171;UBERON:0000924,2.40e-08,171;UBERON:0006601,2.40e-08,171;UBERON:0001869,3.36e-08,32;UBERON:0002791,3.80e-08,32;UBERON:0002199,5.32e-08,46;UBERON:0002416,5.32e-08,46;UBERON:0001950,1.69e-07,20;UBERON:0002619,2.56e-07,22;UBERON:0003076,2.80e-07,15;UBERON:0003057,2.80e-07,15;UBERON:0002097,4.30e-07,41;UBERON:0011216,4.56e-07,223;UBERON:0001013,8.37e-07,14 | |||
|phase1_expression=1.81678379270557,1.49870366723688,1.26858963686374,1.0007329835313,0.893922188854576,0.872338524100369,2.53299878168311,1.26343974685366,7.57438321779532,0,0,0,0,0,0.331397375727916,1.34465029290355,0.602694528023977,0,0.975865597581014,1.96993692922861,1.42800483870977,1.25381888591235,0,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0.376484679085209,0.545812300115692,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,2.53007406669196,3.50936537445123,4.05570253090306,3.1811437882044,10.2193322763554,0.850813354476611,0.221729397462564,0.087834785693126,4.06035134042909,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0,0,0,0.24406205754817,0,0,0,0.44905874525234,0.112611480483322,0,0,0,0,0,0,2.98183171017191,1.01304409331664,0.926864265692532,2.29469296599051,2.4826786753885,0.560677600142307,1.06748995729705,0.98667019366864,3.42332138939743,0.134710672069688,0.163461903113459,7.7192288098915,2.30470369792,0.70296429550139,2.49728061464256,0,1.19558944441441,0.939475989150119,1.45685649931318,1.40450806702248,1.83738754129404,0.491337269247072,3.40975077880026,7.12801714369232,2.96720315134268,0,0,0.336672227908132,1.00094815897571,0.831192346452549,3.5118209670467,3.37136575378922,4.35690370829131,0.113432183160021,3.94657198515496,6.19316427573846,5.72216133130817,2.70081986475962,4.84346887420663,2.31876486041066,5.21127197728451,2.36286865137773,2.24105111870757,3.78650661366172,7.54809168866855,7.27407255684654,3.19508633264953,2.51880245569101,3.05209066158878,0,0,0,0.365921118388786,0,0,0.310983165046111,0,1.82488679537915,3.12899064659632,7.71889125831462,1.38134921352481,2.78620756819187,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,4.41026134156626,0,0.982827216677626,1.18157981336281,0,0,0.686271241194102,0,0,0,0,0.325808305310325,0,0,0.695582429850461,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0.190493682876507,0,0,0,0.205654985406647,0,0,2.46688385559794,6.97536110133248,0.51336800074665,0.517086863031111,3.57656445851882,2.535908257668,2.12750493267896,4.16029747645464,1.02882949704857,0,0.266422179016099,0.428933980974443,0,0,1.95441710576241,0,0.791951872933429,0.602878754119172,1.74306691720059,0.799783929456456,0,0,0,2.15662369942424,3.44585807502342,0,0.434343920002738,0.61642896765115,1.43248770591916,0,0.197030760201927,0,0,0.76228387266739,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,0.24538298343828,1.50051156317903,0.813795071099207,0.415941723061614,1.07057393278297,0.788512075169673,0.819989904948992,1.50473049863859,0,0,0,3.50301420229236,3.90976265106373,13.1186775500036,13.0394501048125,0,0,0,0,0,0,2.48107807818777,2.30192959932094,2.52594084989766,2.94720043288112,3.58195074346692,3.21707842287215,7.42090332224955,0.925258162815933,1.24293207719189,1.14978018419333,1.03850885836724,1.16210378459959,0,0,0,0.459257792658427,0,2.09799063935079,0,0.15403067420883,0,0,0.949964660035881,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,3.40035338437484,0.0915694648183434,0.247528499761764,0.574265537996172,0.650060246036521,0,2.61010939388729,0.770243085573222,0.767518373630648,2.06754858726796,0.859361958946189,0.580066775656914,2.04543905798642,8.27997931514657,0,0,0,0,0.929691098594572,6.61105928344344,1.3940745403212,1.54016790088044,0,2.60979897622522,0.9266210955196,0.858749320451947,3.34942532423701,0.316379424718726,0.762520775695299,1.02359116524534,0.42793898803392,2.54562598340749,0.78494864019923,0.539617372749944,1.92175920815238,0.706874414074119,1.01091240786658,0,1.68503382495592,0.48763373908959,0.974853958525138,0,0.9554993798559,0.141405431953713,1.13008116620243,1.65409603063837,2.65375590096488,0.876901770507525,1.73632660280006,1.31178950409327,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0.709522128141196,5.48879851773927,8.23237232399755,0.379473173765715,0.349934720244983,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,5.42080263306008,0.849523652246594,0,0,0,0,0,0,2.95405774462077,0.333926115068718,0,0.63337622438398,9.56390343605135,2.76283915531148,0,0,0,5.28767299025073,0,0,0,5.22810049875748,0,0,2.90799823828566,2.31920245404628,0,0,0,3.62499787717397,0,0,0.236387681767936,1.37897349296586,0,1.04174996959975,1.77148277162768,1.5677537021303,1.52581736317083,0.774054819518572,1.47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| ||
|short_description=p2@VSTM4 | |||
}} | }} |
Latest revision as of 09:35, 18 September 2015
Short description: | p2@VSTM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VSTM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000298454, ENST00000332853_5end |
EntrezGene: | VSTM4 |
HGNC: | 26470 |
UniProt: | Q8IW00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.61e-14 | 76 |
skin fibroblast | 3.88e-08 | 23 |