FFCP PHASE1:Hg19::chr10:88451647..88451660,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:88451647..88451660,+ to FFCP PHASE1:Hg19::chr10:88451647..88451660,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:88451647..88451660,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr10:88451647..88451660,+ | |||
|id=chr10:88451647..88451660,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.32e-12;1!UBERON:0010226;1.32e-12;1!UBERON:0004140;2.33e-12;1!UBERON:0005425;3.85e-12;1!UBERON:0004874;3.85e-12;1!UBERON:0005062;5.55e-12;4!UBERON:0007284;5.55e-12;4!UBERON:0003104;1.45e-08;31!UBERON:0006603;4.52e-07;65!UBERON:0008814;6.24e-07;2!UBERON:0010056;6.24e-07;2 | |||
|ontology_enrichment_disease=DOID:114!1.33e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.88e-23;2!DOID:178;2.33e-12;1!DOID:326;2.33e-12;1!DOID:3978;2.33e-12;1!DOID:3394;2.33e-12;1!DOID:5844;2.33e-12;1!DOID:1287;3.18e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.78e-23,2;DOID:178,2.20e-12,1;DOID:326,2.20e-12,1;DOID:3978,2.20e-12,1;DOID:3394,2.20e-12,1;DOID:5844,2.20e-12,1;DOID:1287,3.09e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.22e-42!115;UBERON:0001049!4.11e-12!57;UBERON:0005068!4.11e-12!57;UBERON:0006241!4.11e-12!57;UBERON:0007135!4.11e-12!57;UBERON:0004151!7.89e-12!3;UBERON:0003978!1.17e-11!3;UBERON:0009751!1.17e-11!3;UBERON:0000946!1.17e-11!3;UBERON:0002523!1.17e-11!3;UBERON:0005983!1.17e-11!3;UBERON:0002165!1.17e-11!3;UBERON:0002062!1.17e-11!3;UBERON:0007280!1.17e-11!3;UBERON:0003075!1.48e-11!86;UBERON:0007284!1.48e-11!86;UBERON:0002346!7.85e-11!90;UBERON:0002298!4.94e-10!8;UBERON:0007100!1.87e-09!27;UBERON:0001017!2.14e-09!82;UBERON:0004121!3.25e-09!169;UBERON:0002308!5.92e-09!9;UBERON:0000125!5.92e-09!9;UBERON:0000924!7.46e-09!173;UBERON:0006601!7.46e-09!173;UBERON:0005743!8.93e-09!86;UBERON:0001630!1.03e-08!2;UBERON:0005090!1.03e-08!2;UBERON:0000073!1.23e-08!94;UBERON:0001016!1.23e-08!94;UBERON:0002616!1.25e-08!59;UBERON:0002081!2.36e-08!2;UBERON:0002133!3.14e-08!2;UBERON:0000341!3.61e-08!2;UBERON:0003103!3.78e-08!69;UBERON:0005162!5.31e-08!2;UBERON:0000122!5.31e-08!2;UBERON:0000955!6.74e-08!69;UBERON:0006238!6.74e-08!69;UBERON:0009663!9.56e-08!7;UBERON:0000153!1.14e-07!129;UBERON:0007811!1.14e-07!129;UBERON:0002791!1.38e-07!33;UBERON:0003076!2.21e-07!15;UBERON:0003057!2.21e-07!15;UBERON:0001893!2.56e-07!34;UBERON:0002020!2.82e-07!34;UBERON:0003528!2.82e-07!34;UBERON:0002780!4.08e-07!41;UBERON:0001890!4.08e-07!41;UBERON:0006240!4.08e-07!41;UBERON:0003080!6.67e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.98e-27;25!UBERON:0005090;8.01e-24;2!UBERON:0001630;8.01e-24;2!UBERON:0001723;5.80e-16;3!UBERON:0004151;5.80e-16;3!UBERON:0001033;5.80e-16;3!UBERON:0003978;1.18e-15;3!UBERON:0000946;1.18e-15;3!UBERON:0001389;7.88e-13;1!UBERON:0000026;7.88e-13;1!UBERON:0008784;7.88e-13;1!UBERON:0006058;7.88e-13;1!UBERON:0003663;7.88e-13;1!UBERON:0004256;7.88e-13;1!UBERON:0004708;7.88e-13;1!UBERON:0002101;7.88e-13;1!UBERON:0004709;7.88e-13;1!UBERON:0002529;7.88e-13;1!UBERON:0010538;7.88e-13;1!UBERON:0003661;7.88e-13;1!UBERON:0010890;7.88e-13;1!UBERON:0002471;7.88e-13;1!UBERON:0001383;7.88e-13;1!UBERON:0010758;7.88e-13;1!UBERON:0010707;7.88e-13;1!UBERON:0000978;7.88e-13;1!UBERON:0002103;7.88e-13;1!UBERON:0001665;7.88e-13;1!UBERON:0003823;7.88e-13;1!UBERON:0000154;7.88e-13;1!UBERON:0010709;7.88e-13;1!UBERON:0002426;8.84e-13;1!UBERON:0003831;8.84e-13;1!UBERON:0003898;8.84e-13;1!UBERON:0004830;8.84e-13;1!UBERON:0003830;8.84e-13;1!UBERON:0005175;8.84e-13;1!UBERON:0001774;8.84e-13;1!UBERON:0001103;8.84e-13;1!UBERON:0002084;1.32e-12;1!UBERON:0002079;1.32e-12;1!UBERON:0002146;1.32e-12;1!UBERON:0002082;1.32e-12;1!UBERON:0005623;1.32e-12;1!UBERON:0000948;1.51e-12;22!UBERON:0000989;3.85e-12;1!UBERON:0002135;3.85e-12;1!UBERON:0000941;3.85e-12;1!UBERON:0001785;3.85e-12;1!UBERON:0002464;3.85e-12;1!UBERON:0004904;3.85e-12;1!UBERON:0008811;3.85e-12;1!UBERON:0001021;3.85e-12;1!UBERON:0001134;1.81e-11;16!UBERON:0002036;1.81e-11;16!UBERON:0003103;4.48e-07;61!UBERON:0000341;6.24e-07;2!UBERON:0002081;6.24e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.39e-25,27;UBERON:0005090,8.02e-24,2;UBERON:0001630,8.02e-24,2;UBERON:0003103,3.64e-18,68;UBERON:0007023,4.61e-17,114;UBERON:0004151,5.38e-16,3;UBERON:0001723,6.74e-16,3;UBERON:0001033,6.74e-16,3;UBERON:0010056,6.74e-16,3;UBERON:0003978,1.22e-15,3;UBERON:0009751,1.22e-15,3;UBERON:0000946,1.22e-15,3;UBERON:0002523,1.22e-15,3;UBERON:0005983,1.22e-15,3;UBERON:0002165,1.22e-15,3;UBERON:0002062,1.22e-15,3;UBERON:0007280,1.22e-15,3;UBERON:0005418,7.89e-13,1;UBERON:0001389,7.89e-13,1;UBERON:0000026,7.89e-13,1;UBERON:0008784,7.89e-13,1;UBERON:0006058,7.89e-13,1;UBERON:0003663,7.89e-13,1;UBERON:0004256,7.89e-13,1;UBERON:0004708,7.89e-13,1;UBERON:0002101,7.89e-13,1;UBERON:0004709,7.89e-13,1;UBERON:0002529,7.89e-13,1;UBERON:0010538,7.89e-13,1;UBERON:0003661,7.89e-13,1;UBERON:0010890,7.89e-13,1;UBERON:0002471,7.89e-13,1;UBERON:0001383,7.89e-13,1;UBERON:0004357,7.89e-13,1;UBERON:0004347,7.89e-13,1;UBERON:0005420,7.89e-13,1;UBERON:0005732,7.89e-13,1;UBERON:0010758,7.89e-13,1;UBERON:0010707,7.89e-13,1;UBERON:0000978,7.89e-13,1;UBERON:0002103,7.89e-13,1;UBERON:0001665,7.89e-13,1;UBERON:0003823,7.89e-13,1;UBERON:0000154,7.89e-13,1;UBERON:0010709,7.89e-13,1;UBERON:0005733,7.89e-13,1;UBERON:0005730,7.89e-13,1;UBERON:0002426,8.85e-13,1;UBERON:0003831,8.85e-13,1;UBERON:0003898,8.85e-13,1;UBERON:0004830,8.85e-13,1;UBERON:0003830,8.85e-13,1;UBERON:0005175,8.85e-13,1;UBERON:0001774,8.85e-13,1;UBERON:0001103,8.85e-13,1;UBERON:0010084,8.85e-13,1;UBERON:0002084,1.11e-12,1;UBERON:0002082,1.11e-12,1;UBERON:0010226,1.11e-12,1;UBERON:0002079,1.40e-12,1;UBERON:0002146,1.57e-12,1;UBERON:0005623,1.57e-12,1;UBERON:0000989,3.08e-12,1;UBERON:0008811,3.08e-12,1;UBERON:0006258,3.08e-12,1;UBERON:0005876,3.08e-12,1;UBERON:0004874,3.08e-12,1;UBERON:0002135,3.45e-12,1;UBERON:0000941,3.85e-12,1;UBERON:0001785,3.85e-12,1;UBERON:0002464,3.85e-12,1;UBERON:0004904,3.85e-12,1;UBERON:0001021,3.85e-12,1;UBERON:0003902,3.85e-12,1;UBERON:0005425,3.85e-12,1;UBERON:0000948,1.63e-11,24;UBERON:0005498,1.63e-11,24;UBERON:0004140,1.63e-11,24;UBERON:0009881,1.63e-11,24;UBERON:0004141,1.63e-11,24;UBERON:0003084,1.63e-11,24;UBERON:0007005,1.63e-11,24;UBERON:0004139,1.63e-11,24;UBERON:0004291,1.63e-11,24;UBERON:0004797,3.24e-07,7;UBERON:0000341,5.41e-07,2;UBERON:0002081,6.42e-07,2;UBERON:0010227,6.42e-07,2 | |||
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|short_description=p@chr10:88451647..88451660,+ | |||
}} | }} |
Latest revision as of 16:20, 23 July 2015
Short description: | p@chr10:88451647..88451660, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:88451647..88451660, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.78e-23 | 2 |
vascular disease | 2.20e-12 | 1 |
ischemia | 2.20e-12 | 1 |
extrinsic cardiomyopathy | 2.20e-12 | 1 |
myocardial ischemia | 2.20e-12 | 1 |
myocardial infarction | 2.20e-12 | 1 |
cardiovascular system disease | 3.09e-12 | 4 |