FFCP PHASE1:Hg19::chr11:63606558..63606623,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:63606558..63606623,+ to FFCP PHASE1:Hg19::chr11:63606558..63606623,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2011 | |EntrezGene=2011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3332 | |HGNC=3332 | ||
|TSSclassifier=strong | |||
|UniProt=Q5DNC6 | |UniProt=Q5DNC6 | ||
|association_with_transcript=0bp_to_ENST00000350490,ENST00000508025_5end | |||
|cluster_id=chr11:63606558..63606623,+ | |||
|description=CAGE_peak_1_at_MARK2_5end | |||
|id=chr11:63606558..63606623,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.52e-20!140;CL:0000766!4.82e-19!76;CL:0000860!1.30e-18!45;CL:0002057!1.03e-17!42;CL:0002087!9.58e-17!119;CL:0002031!1.29e-16!124;CL:0000037!5.78e-16!172;CL:0000566!5.78e-16!172;CL:0000988!6.67e-16!182;CL:0000557!7.05e-16!71;CL:0002032!1.14e-15!165;CL:0000837!1.14e-15!165;CL:0002009!1.60e-14!65;CL:0000839!3.51e-14!70;CL:0002194!3.89e-14!63;CL:0000576!3.89e-14!63;CL:0000040!3.89e-14!63;CL:0000559!3.89e-14!63;CL:0000763!9.06e-13!112;CL:0000049!9.06e-13!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.44e-13;33!CL:0002057;2.44e-13;33!CL:0000576;1.95e-11;48!CL:0000473;4.39e-09;39!CL:0000234;4.39e-09;39!CL:0000766;4.94e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.64e-20,136;CL:0000766,4.49e-19,72;CL:0000860,1.03e-17,42;CL:0002057,1.03e-17,42;CL:0002087,1.47e-16,115;CL:0002031,2.03e-16,120;CL:0000557,7.30e-16,67;CL:0000037,1.06e-15,168;CL:0000988,1.08e-15,177;CL:0002032,2.05e-15,161;CL:0000837,2.05e-15,161;CL:0000473,1.10e-14,48;CL:0000234,1.10e-14,48;CL:0002009,1.64e-14,61;CL:0002194,3.95e-14,59;CL:0000576,3.95e-14,59;CL:0000040,3.95e-14,59;CL:0000559,3.95e-14,59;CL:0000839,3.96e-14,66;CL:0000763,1.44e-12,108;CL:0000049,1.44e-12,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.12e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.01e-24!115;UBERON:0002390!2.17e-19!102;UBERON:0003061!2.17e-19!102;UBERON:0002193!2.38e-17!112;UBERON:0001049!1.66e-16!57;UBERON:0005068!1.66e-16!57;UBERON:0006241!1.66e-16!57;UBERON:0007135!1.66e-16!57;UBERON:0002780!8.10e-14!41;UBERON:0001890!8.10e-14!41;UBERON:0006240!8.10e-14!41;UBERON:0003080!5.76e-13!42;UBERON:0002616!6.86e-13!59;UBERON:0001017!9.65e-13!82;UBERON:0002371!1.28e-12!80;UBERON:0000955!2.37e-12!69;UBERON:0006238!2.37e-12!69;UBERON:0001893!2.78e-12!34;UBERON:0005743!6.71e-12!86;UBERON:0003075!8.96e-12!86;UBERON:0007284!8.96e-12!86;UBERON:0002791!9.73e-12!33;UBERON:0002020!1.05e-11!34;UBERON:0003528!1.05e-11!34;UBERON:0001869!2.85e-11!32;UBERON:0001474!6.34e-11!86;UBERON:0002346!9.39e-11!90;UBERON:0000073!3.16e-10!94;UBERON:0001016!3.16e-10!94;UBERON:0002619!1.36e-09!22;UBERON:0001950!5.96e-09!20;UBERON:0003056!1.89e-08!61;UBERON:0000956!2.39e-08!25;UBERON:0000203!2.39e-08!25;UBERON:0004121!4.30e-08!169;UBERON:0002405!4.61e-08!115;UBERON:0000153!9.89e-08!129;UBERON:0007811!9.89e-08!129;UBERON:0000924!1.36e-07!173;UBERON:0006601!1.36e-07!173;UBERON:0000033!8.30e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.52e-11;34!UBERON:0000073;1.25e-10;53!UBERON:0002616;1.25e-10;53!UBERON:0002780;2.60e-10;41!UBERON:0001890;2.60e-10;41!UBERON:0003528;3.43e-10;34!UBERON:0002020;3.43e-10;34!UBERON:0001869;3.85e-10;32!UBERON:0002791;4.20e-10;32!UBERON:0002619;1.13e-09;22!UBERON:0001950;5.47e-09;20!UBERON:0000956;1.81e-08;25!UBERON:0000203;1.81e-08;25!UBERON:0007023;7.27e-07;114!UBERON:0001017;9.34e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.35e-23,114;UBERON:0002390,2.76e-19,98;UBERON:0003061,2.76e-19,98;UBERON:0001049,2.47e-17,56;UBERON:0005068,2.47e-17,56;UBERON:0006241,2.47e-17,56;UBERON:0007135,2.47e-17,56;UBERON:0000073,3.45e-17,53;UBERON:0002616,3.45e-17,53;UBERON:0002193,3.46e-17,108;UBERON:0002780,8.10e-14,41;UBERON:0001890,8.10e-14,41;UBERON:0003080,8.10e-14,41;UBERON:0006240,8.10e-14,41;UBERON:0001017,2.74e-13,81;UBERON:0000955,6.04e-13,68;UBERON:0006238,6.04e-13,68;UBERON:0002371,1.73e-12,76;UBERON:0002405,2.18e-12,93;UBERON:0001893,2.78e-12,34;UBERON:0003528,1.05e-11,34;UBERON:0002020,1.05e-11,34;UBERON:0001016,2.26e-11,89;UBERON:0001869,2.85e-11,32;UBERON:0002791,3.45e-11,32;UBERON:0003075,6.12e-11,82;UBERON:0007284,6.12e-11,82;UBERON:0001474,9.41e-11,82;UBERON:0010371,1.82e-10,104;UBERON:0002346,6.02e-10,86;UBERON:0002619,1.36e-09,22;UBERON:0001950,5.96e-09,20;UBERON:0003056,1.60e-08,61;UBERON:0000956,2.39e-08,25;UBERON:0000203,2.39e-08,25;UBERON:0004765,1.11e-07,90;UBERON:0004121,3.45e-07,171;UBERON:0000924,3.45e-07,171;UBERON:0006601,3.45e-07,171 | |||
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| ||
|short_description=p1@MARK2 | |||
}} | }} |
Latest revision as of 00:27, 19 September 2015
Short description: | p1@MARK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MARK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000350490, ENST00000508025_5end |
EntrezGene: | MARK2 |
HGNC: | 3332 |
UniProt: | Q5DNC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.64e-20 | 136 |
myeloid leukocyte | 4.49e-19 | 72 |
classical monocyte | 1.03e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-17 | 42 |
nongranular leukocyte | 1.47e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 2.03e-16 | 120 |
granulocyte monocyte progenitor cell | 7.30e-16 | 67 |
hematopoietic stem cell | 1.06e-15 | 168 |
hematopoietic cell | 1.08e-15 | 177 |
hematopoietic oligopotent progenitor cell | 2.05e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-15 | 161 |
defensive cell | 1.10e-14 | 48 |
phagocyte | 1.10e-14 | 48 |
macrophage dendritic cell progenitor | 1.64e-14 | 61 |
monopoietic cell | 3.95e-14 | 59 |
monocyte | 3.95e-14 | 59 |
monoblast | 3.95e-14 | 59 |
promonocyte | 3.95e-14 | 59 |
myeloid lineage restricted progenitor cell | 3.96e-14 | 66 |
myeloid cell | 1.44e-12 | 108 |
common myeloid progenitor | 1.44e-12 | 108 |