FFCP PHASE1:Hg19::chr12:57735480..57735493,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:57735480..57735493,- to FFCP PHASE1:Hg19::chr12:57735480..57735493,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22864 | |EntrezGene=22864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29167 | |HGNC=29167 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCG9 | |UniProt=B5MCG9 | ||
|association_with_transcript=-215bp_to_ENST00000403821_5end | |||
|cluster_id=chr12:57735480..57735493,- | |||
|coexpression_cluster_id=C990 | |||
|description=CAGE_peak_9_at_R3HDM2_5end | |||
|id=chr12:57735480..57735493,- | |||
|ontology_enrichment_celltype=CL:0000451!8.37e-10!10;CL:0000990!1.92e-08!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.04e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.87e-66!57;UBERON:0005068!1.87e-66!57;UBERON:0006241!1.87e-66!57;UBERON:0007135!1.87e-66!57;UBERON:0002616!6.44e-64!59;UBERON:0002780!2.61e-61!41;UBERON:0001890!2.61e-61!41;UBERON:0006240!2.61e-61!41;UBERON:0003080!1.07e-59!42;UBERON:0000955!2.69e-59!69;UBERON:0006238!2.69e-59!69;UBERON:0001017!2.25e-54!82;UBERON:0005743!3.17e-54!86;UBERON:0002346!4.73e-49!90;UBERON:0003075!5.08e-49!86;UBERON:0007284!5.08e-49!86;UBERON:0000073!3.23e-48!94;UBERON:0001016!3.23e-48!94;UBERON:0001893!4.08e-46!34;UBERON:0002020!8.48e-46!34;UBERON:0003528!8.48e-46!34;UBERON:0002791!3.27e-43!33;UBERON:0003056!8.67e-42!61;UBERON:0007023!2.53e-41!115;UBERON:0001869!3.93e-41!32;UBERON:0002619!6.89e-40!22;UBERON:0001950!3.69e-39!20;UBERON:0000956!9.51e-35!25;UBERON:0000203!9.51e-35!25;UBERON:0000033!3.69e-33!123;UBERON:0000153!3.60e-31!129;UBERON:0007811!3.60e-31!129;UBERON:0000924!3.03e-23!173;UBERON:0006601!3.03e-23!173;UBERON:0004121!1.21e-22!169;UBERON:0000200!3.92e-21!6;UBERON:0001894!5.58e-17!7;UBERON:0006222!5.58e-17!7;UBERON:0000025!3.38e-15!194;UBERON:0003296!5.27e-14!4;UBERON:0010133!5.27e-14!4;UBERON:0002298!1.63e-13!8;UBERON:0002308!2.63e-12!9;UBERON:0000125!2.63e-12!9;UBERON:0004733!5.66e-12!12;UBERON:0002028!5.66e-12!12;UBERON:0007277!5.66e-12!12;UBERON:0001872!1.18e-11!5;UBERON:0002021!1.42e-11!5;UBERON:0002771!3.10e-11!3;UBERON:0004732!5.63e-11!13;UBERON:0001871!1.17e-10!7;UBERON:0004111!1.87e-10!241;UBERON:0000988!2.49e-10!3;UBERON:0006331!5.89e-10!3;UBERON:0003076!2.22e-09!15;UBERON:0003057!2.22e-09!15;UBERON:0002420!1.05e-08!9;UBERON:0007245!1.05e-08!9;UBERON:0010009!1.05e-08!9;UBERON:0010011!1.05e-08!9;UBERON:0000454!1.05e-08!9;UBERON:0002680!1.10e-08!9;UBERON:0001895!1.10e-08!9;UBERON:0010092!1.10e-08!9;UBERON:0001905!1.96e-08!2;UBERON:0002757!1.96e-08!2;UBERON:0010134!1.96e-08!2;UBERON:0002784!1.96e-08!2;UBERON:0005408!1.96e-08!2;UBERON:0001899!1.96e-08!2;UBERON:0001870!2.88e-08!2;UBERON:0000477!4.17e-08!286;UBERON:0000483!4.71e-08!309;UBERON:0000369!5.14e-08!4;UBERON:0002435!5.14e-08!4;UBERON:0000204!5.14e-08!4;UBERON:0010082!5.14e-08!4;UBERON:0000119!6.91e-08!312;UBERON:0009663!1.70e-07!7;UBERON:0002360!2.03e-07!2;UBERON:0000094!2.03e-07!2;UBERON:0007645!2.03e-07!2;UBERON:0002148!2.09e-07!2;UBERON:0009662!2.09e-07!2;UBERON:0000007!2.80e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.66e-83;20!UBERON:0002619;1.28e-75;22!UBERON:0000956;1.32e-66;25!UBERON:0000203;1.32e-66;25!UBERON:0001869;3.11e-59;32!UBERON:0001893;6.25e-57;34!UBERON:0002791;1.94e-51;32!UBERON:0003528;1.54e-48;34!UBERON:0002020;1.54e-48;34!UBERON:0000200;5.35e-48;6!UBERON:0002780;1.03e-42;41!UBERON:0001890;1.03e-42;41!UBERON:0000073;9.03e-29;53!UBERON:0002616;9.03e-29;53!UBERON:0001872;5.30e-26;5!UBERON:0002021;6.03e-26;5!UBERON:0001870;8.07e-25;3!UBERON:0000955;5.88e-21;68!UBERON:0001017;3.05e-20;75!UBERON:0001905;7.07e-18;2!UBERON:0002757;7.07e-18;2!UBERON:0010134;7.07e-18;2!UBERON:0005408;7.07e-18;2!UBERON:0001899;7.07e-18;2!UBERON:0002771;4.68e-17;2!UBERON:0002702;7.01e-17;2!UBERON:0001016;4.60e-15;83!UBERON:0001871;5.68e-11;6!UBERON:0007023;3.08e-10;114!UBERON:0002581;1.03e-09;1!UBERON:0007190;1.03e-09;1!UBERON:0002902;1.21e-09;1!UBERON:0009899;1.21e-09;1!UBERON:0003296;2.17e-09;4!UBERON:0010133;2.17e-09;4!UBERON:0002784;2.17e-09;4!UBERON:0002022;2.25e-09;1!UBERON:0001882;3.00e-09;1!UBERON:0005403;3.00e-09;1!UBERON:0003112;4.50e-09;1!UBERON:0011158;4.50e-09;1!UBERON:0003128;4.50e-09;1!UBERON:0001703;4.50e-09;1!UBERON:0002241;4.50e-09;1!UBERON:0011216;2.79e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.04e-83,20;UBERON:0002619,1.12e-75,22;UBERON:0001869,3.24e-67,32;UBERON:0000956,1.17e-66,25;UBERON:0000203,1.17e-66,25;UBERON:0002780,5.42e-66,41;UBERON:0001890,5.42e-66,41;UBERON:0003080,5.42e-66,41;UBERON:0006240,5.42e-66,41;UBERON:0001893,3.27e-63,34;UBERON:0002791,3.09e-59,32;UBERON:0000073,3.64e-56,53;UBERON:0002616,3.64e-56,53;UBERON:0003528,1.07e-55,34;UBERON:0002020,1.07e-55,34;UBERON:0001049,4.87e-53,56;UBERON:0005068,4.87e-53,56;UBERON:0006241,4.87e-53,56;UBERON:0007135,4.87e-53,56;UBERON:0000200,3.29e-48,6;UBERON:0000955,3.61e-47,68;UBERON:0006238,3.61e-47,68;UBERON:0003056,1.09e-43,61;UBERON:0001017,2.79e-43,81;UBERON:0001016,1.05e-38,89;UBERON:0003075,2.17e-35,82;UBERON:0007284,2.17e-35,82;UBERON:0002346,1.31e-33,86;UBERON:0007023,1.50e-30,114;UBERON:0010371,2.87e-27,104;UBERON:0001872,4.51e-26,5;UBERON:0002021,7.08e-26,5;UBERON:0001870,7.44e-25,3;UBERON:0010314,3.78e-23,132;UBERON:0004121,8.90e-19,171;UBERON:0000924,8.90e-19,171;UBERON:0006601,8.90e-19,171;UBERON:0001905,7.07e-18,2;UBERON:0002757,7.07e-18,2;UBERON:0010134,7.07e-18,2;UBERON:0005408,7.07e-18,2;UBERON:0001899,7.07e-18,2;UBERON:0002771,3.67e-17,2;UBERON:0002702,5.97e-17,2;UBERON:0011216,4.83e-15,223;UBERON:0000025,2.99e-13,192;UBERON:0001871,5.49e-11,6;UBERON:0004111,6.69e-10,240;UBERON:0002581,9.44e-10,1;UBERON:0007190,1.03e-09,1;UBERON:0002902,1.21e-09,1;UBERON:0009899,1.21e-09,1;UBERON:0002022,2.16e-09,1;UBERON:0003296,2.17e-09,4;UBERON:0010133,2.17e-09,4;UBERON:0002784,2.17e-09,4;UBERON:0001882,3.00e-09,1;UBERON:0005403,3.00e-09,1;UBERON:0003112,4.15e-09,1;UBERON:0011158,4.15e-09,1;UBERON:0003128,4.15e-09,1;UBERON:0001703,4.15e-09,1;UBERON:0002241,4.15e-09,1;UBERON:0004761,4.15e-09,1;UBERON:0009617,4.15e-09,1;UBERON:0000483,5.39e-07,306;UBERON:0000119,6.84e-07,309 | |||
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|short_description=p9@R3HDM2 | |||
}} | }} |
Latest revision as of 14:05, 19 September 2015
Short description: | p9@R3HDM2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_R3HDM2_5end |
Coexpression cluster: | C990_pineal_occipital_merkel_Lens_medial_parietal_middle |
Association with transcript: | -215bp_to_ENST00000403821_5end |
EntrezGene: | R3HDM2 |
HGNC: | 29167 |
UniProt: | B5MCG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data