FFCP PHASE1:Hg19::chr13:30424703..30424735,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:30424703..30424735,- to FFCP PHASE1:Hg19::chr13:30424703..30424735,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5412 | |EntrezGene=5412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12504 | |HGNC=12504 | ||
|TSSclassifier=strong | |||
|UniProt=B2R4J1,O95164 | |UniProt=B2R4J1,O95164 | ||
|association_with_transcript=84bp_to_NM_007106,uc001usp.2_5end | |||
|cluster_id=chr13:30424703..30424735,- | |||
|description=CAGE_peak_3_at_UBL3_5end | |||
|id=chr13:30424703..30424735,- | |||
|ontology_enrichment_celltype=CL:0000738!2.05e-20!140;CL:0002087!1.09e-16!119;CL:0002031!9.05e-16!124;CL:0000766!6.09e-15!76;CL:0002057!1.64e-13!42;CL:0000860!3.28e-13!45;CL:0000037!2.67e-12!172;CL:0000566!2.67e-12!172;CL:0000557!2.94e-12!71;CL:0002009!1.19e-11!65;CL:0002032!2.68e-11!165;CL:0000837!2.68e-11!165;CL:0002194!4.66e-11!63;CL:0000576!4.66e-11!63;CL:0000040!4.66e-11!63;CL:0000559!4.66e-11!63;CL:0000839!1.53e-10!70;CL:0000988!2.00e-10!182;CL:0000791!5.09e-07!18;CL:0000789!5.09e-07!18;CL:0002420!5.09e-07!18;CL:0002419!5.09e-07!18;CL:0000790!5.09e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.27e-11;33!CL:0002057;7.27e-11;33!CL:0000576;1.59e-08;48!CL:0000473;1.56e-07;39!CL:0000234;1.56e-07;39!CL:0000766;3.17e-07;69!CL:0000791;5.45e-07;18!CL:0000789;5.45e-07;18!CL:0002419;5.45e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.61e-20,136;CL:0002087,7.55e-17,115;CL:0002031,7.58e-16,120;CL:0000766,2.24e-15,72;CL:0000860,1.31e-13,42;CL:0002057,1.31e-13,42;CL:0000557,1.32e-12,67;CL:0000037,2.97e-12,168;CL:0002009,5.17e-12,61;CL:0002194,2.09e-11,59;CL:0000576,2.09e-11,59;CL:0000040,2.09e-11,59;CL:0000559,2.09e-11,59;CL:0000473,2.34e-11,48;CL:0000234,2.34e-11,48;CL:0002032,3.01e-11,161;CL:0000837,3.01e-11,161;CL:0000839,9.11e-11,66;CL:0000988,1.53e-10,177;CL:0000791,5.12e-07,18;CL:0000789,5.12e-07,18;CL:0002420,5.12e-07,18;CL:0002419,5.12e-07,18;CL:0000790,5.12e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;3.70e-10;42!UBERON:0006601;1.81e-07;82!CL:0000790;5.45e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-33!115;UBERON:0001049!1.23e-25!57;UBERON:0005068!1.23e-25!57;UBERON:0006241!1.23e-25!57;UBERON:0007135!1.23e-25!57;UBERON:0002780!1.06e-22!41;UBERON:0001890!1.06e-22!41;UBERON:0006240!1.06e-22!41;UBERON:0003080!1.91e-21!42;UBERON:0001017!5.32e-21!82;UBERON:0005743!1.22e-19!86;UBERON:0002616!1.85e-19!59;UBERON:0002020!1.14e-18!34;UBERON:0003528!1.14e-18!34;UBERON:0000073!1.30e-18!94;UBERON:0001016!1.30e-18!94;UBERON:0001893!1.35e-18!34;UBERON:0002791!5.40e-18!33;UBERON:0000955!2.66e-17!69;UBERON:0006238!2.66e-17!69;UBERON:0001869!2.78e-17!32;UBERON:0000956!3.82e-13!25;UBERON:0000203!3.82e-13!25;UBERON:0002619!4.48e-13!22;UBERON:0003075!4.04e-12!86;UBERON:0007284!4.04e-12!86;UBERON:0002390!6.52e-12!102;UBERON:0003061!6.52e-12!102;UBERON:0001950!6.98e-12!20;UBERON:0002346!8.58e-11!90;UBERON:0002193!3.33e-10!112;UBERON:0003056!7.59e-10!61;UBERON:0002371!4.22e-09!80;UBERON:0001474!3.73e-08!86;UBERON:0002308!4.33e-07!9;UBERON:0000125!4.33e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.06e-17;41!UBERON:0001890;6.06e-17;41!UBERON:0001893;1.62e-16;34!UBERON:0003528;1.68e-16;34!UBERON:0002020;1.68e-16;34!UBERON:0002791;3.32e-16;32!UBERON:0001869;3.86e-16;32!UBERON:0000073;3.30e-15;53!UBERON:0002616;3.30e-15;53!UBERON:0000956;1.54e-13;25!UBERON:0000203;1.54e-13;25!UBERON:0002619;1.80e-13;22!UBERON:0001950;3.09e-12;20!UBERON:0001017;7.29e-10;75!UBERON:0007023;1.71e-09;114!UBERON:0000955;4.65e-09;68!UBERON:0001016;7.43e-09;83!UBERON:0000125;2.82e-07;9!UBERON:0002308;2.82e-07;9!UBERON:0002420;7.78e-07;9!UBERON:0007245;7.78e-07;9!UBERON:0010009;7.78e-07;9!UBERON:0010011;7.78e-07;9!UBERON:0000454;7.78e-07;9 | |||
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| ||
|short_description=p3@UBL3 | |||
}} | }} |
Latest revision as of 01:38, 17 September 2015
Short description: | p3@UBL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UBL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 84bp_to_NM_007106, uc001usp.2_5end |
EntrezGene: | UBL3 |
HGNC: | 12504 |
UniProt: | B2R4J1O95164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.61e-20 | 136 |
nongranular leukocyte | 7.55e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 7.58e-16 | 120 |
myeloid leukocyte | 2.24e-15 | 72 |
classical monocyte | 1.31e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-13 | 42 |
granulocyte monocyte progenitor cell | 1.32e-12 | 67 |
hematopoietic stem cell | 2.97e-12 | 168 |
macrophage dendritic cell progenitor | 5.17e-12 | 61 |
monopoietic cell | 2.09e-11 | 59 |
monocyte | 2.09e-11 | 59 |
monoblast | 2.09e-11 | 59 |
promonocyte | 2.09e-11 | 59 |
defensive cell | 2.34e-11 | 48 |
phagocyte | 2.34e-11 | 48 |
hematopoietic oligopotent progenitor cell | 3.01e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.01e-11 | 161 |
myeloid lineage restricted progenitor cell | 9.11e-11 | 66 |
hematopoietic cell | 1.53e-10 | 177 |
mature alpha-beta T cell | 5.12e-07 | 18 |
alpha-beta T cell | 5.12e-07 | 18 |
immature T cell | 5.12e-07 | 18 |
mature T cell | 5.12e-07 | 18 |
immature alpha-beta T cell | 5.12e-07 | 18 |