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FFCP PHASE1:Mm9::chr11:102254733..102254810,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:102254733..102254810,+
|DHSsupport=NA
|short_description=p1@Rundc3a
|DPIdataset=NA
|description=CAGE_peak_1_at_Rundc3a_5end
|association_with_transcript=0bp_to_uc007lrq.2,uc007lrr.2_5end
|EntrezGene=51799
|EntrezGene=51799
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=O08576
|UniProt=O08576
|association_with_transcript=0bp_to_uc007lrq.2,uc007lrr.2_5end
|cluster_id=chr11:102254733..102254810,+
|description=CAGE_peak_1_at_Rundc3a_5end
|id=chr11:102254733..102254810,+
|ontology_enrichment_celltype=CL:0000221!6.01e-17!44;CL:0000133!6.01e-17!44;CL:0000540!1.24e-16!33;CL:0000047!1.24e-16!33;CL:0000031!1.24e-16!33;CL:0000404!1.24e-16!33;CL:0002319!1.29e-16!43;CL:0000117!1.31e-13!23;CL:0000337!1.31e-13!23;CL:0000393!4.19e-11!39;CL:0000211!4.19e-11!39;CL:0000055!4.89e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000221,9.48e-19,44;CL:0000133,9.48e-19,44;CL:0000540,2.13e-18,33;CL:0000047,2.13e-18,33;CL:0000031,2.13e-18,33;CL:0000404,2.13e-18,33;CL:0002319,2.22e-18,43;CL:0000117,5.11e-15,23;CL:0000337,5.11e-15,23;CL:0000393,6.84e-13,39;CL:0000211,6.84e-13,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!6.76e-37!102;UBERON:0000924!6.76e-37!102;UBERON:0006601!6.76e-37!102;UBERON:0001017!4.43e-36!73;UBERON:0005743!4.43e-36!73;UBERON:0000073!4.55e-36!75;UBERON:0001016!4.55e-36!75;UBERON:0002346!1.66e-33!71;UBERON:0003075!1.66e-33!71;UBERON:0007284!1.66e-33!71;UBERON:0000033!9.81e-30!63;UBERON:0001049!8.89e-27!52;UBERON:0005068!8.89e-27!52;UBERON:0006241!8.89e-27!52;UBERON:0007135!8.89e-27!52;UBERON:0000955!2.45e-26!50;UBERON:0006238!2.45e-26!50;UBERON:0002616!1.01e-25!49;UBERON:0003056!1.57e-23!49;UBERON:0003080!1.06e-20!40;UBERON:0002780!3.78e-20!39;UBERON:0001890!3.78e-20!39;UBERON:0006240!3.78e-20!39;UBERON:0002020!1.15e-18!34;UBERON:0002791!3.77e-16!29;UBERON:0003528!3.77e-16!29;UBERON:0001893!3.77e-16!29;UBERON:0007811!5.18e-16!86;UBERON:0000153!2.32e-13!94;UBERON:0000956!1.82e-11!21;UBERON:0001869!1.82e-11!21;UBERON:0000203!1.82e-11!21;UBERON:0002619!2.08e-09!17;UBERON:0002021!9.85e-08!10;UBERON:0000411!9.85e-08!10;UBERON:0001950!9.85e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.82e-40,73;UBERON:0001016,3.93e-40,75;UBERON:0004121,1.10e-36,95;UBERON:0000924,1.10e-36,95;UBERON:0006601,1.10e-36,95;UBERON:0002346,1.36e-34,64;UBERON:0003075,1.36e-34,64;UBERON:0007284,1.36e-34,64;UBERON:0000073,1.08e-31,54;UBERON:0001049,9.69e-30,52;UBERON:0005068,9.69e-30,52;UBERON:0006241,9.69e-30,52;UBERON:0007135,9.69e-30,52;UBERON:0010371,9.67e-29,73;UBERON:0000955,9.47e-27,47;UBERON:0006238,9.47e-27,47;UBERON:0003056,4.14e-26,49;UBERON:0002616,4.47e-26,46;UBERON:0010314,3.28e-23,92;UBERON:0003080,6.03e-23,40;UBERON:0002780,2.50e-22,39;UBERON:0001890,2.50e-22,39;UBERON:0006240,2.50e-22,39;UBERON:0002020,1.13e-20,34;UBERON:0003528,7.38e-18,29;UBERON:0002791,7.38e-18,29;UBERON:0001893,7.38e-18,29;UBERON:0000956,1.27e-12,21;UBERON:0001869,1.27e-12,21;UBERON:0000203,1.27e-12,21;UBERON:0002619,2.51e-10,17;UBERON:0002021,1.86e-08,10;UBERON:0000411,1.86e-08,10;UBERON:0001950,1.86e-08,10;UBERON:0003076,3.38e-07,12;UBERON:0003057,3.38e-07,12
|phase1_expression=41.6387002472464,0,0,0.30246421130683,0,8.56184286750638,10.2789561862031,2.7115897922731,0.281577444303333,0.70219357896598,0,0.0797721589953364,0.342401459862411,0.611942816932982,1.33243904726265,1.61980213911861,2.79824751251259,0.157731082679119,0.137114433605739,0,29.8501948430255,0.0992909512008853,0,1.75991665072747,2.75291137280604,0.57423196411502,0.86152399231815,2.15471232685889,2.47030445293286,1.26015064879965,3.54768817048488,0,0,0,0.288851619751275,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0,0.709638518536602,0.183546752161682,3.9119567217402,17.8780628231966,1.97717564461025,2.3331587888914,3.77963338388479,4.31257693094915,0,0,1.00828139742739,0,0,0,109.250888864183,123.254898170384,95.0747105259269,0.338844532069132,0,0,0,0,12.8828047522914,14.6002956022191,86.8918951145043,85.7287708406236,86.443559115418,112.260836870695,90.7769703311132,84.2736698598884,112.618428446428,73.5375029288017,176.185409599022,140.328384555621,134.405716599213,115.53238805165,125.978485240518,101.578107258568,150.200453462743,123.245011596938,128.35052813252,81.612118176206,76.5959642699174,98.7917062874093,3.25622631332691,8.08615693142605,0.869593466105033,0,0.679971333707751,0,0,0,5.89866564553358,0,0,0.35333957451034,19.2955485094052,0,0,0,0,0.253359865475099,0,2.96878087269556,0.258937883647172,18.2583831049734,21.685665845767,19.485790611977,16.3737003051802,22.9098413639986,16.344830291863,9.92766071504436,0.741584903203122,0,0,0,0,0,3.72783522436244,126.774085106,132.370318706104,2.81002760729451,0,0,0,101.108681598255,106.140139853921,99.6439012255015,158.180131374972,187.695145680463,118.854761488068,117.138191934921,0.916554274652847,0.124406970610093,0,13.0473950649614,3.513251959993,22.7603083389138,21.7875177064473,20.9479696791644,26.6022711681692,30.1067242669397,38.3240053449291,38.8055056108524,0.431135985865684,0.567318240503458,0.703804496655795,0.219195732427575,0,1.0447564995665,0.411564272815887,0.995171334092466,0,0,0,0,0.703578179943289,0.720248245844059,0.473489471170421,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.268412837520744,137.109046463811,64.7270011865699,1.65209391491899,0.528901133327089,3.62590025909898,5.34144345279009,4.25262622362908,3.42861991859682,2.2237804384487,3.61428689613862,1.89811624617805,3.12928013975621,3.01602250560323,2.98434708061726,3.50935356814416,1.79763881730844,1.29682829924817,2.58883655230677,0.758671603812327,3.77020091612105,0,0,0.581857461502877,0.561086559122548,0.316182685621286,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0.482354319504834,0,0,0.486405680325106,0,0,0,0.312037673114561,0.252578877947112,0,0,0,1.51593129416388,0.814824882210129,0.678980343100753,0,0.670025029767263,0,0.390267295715598,0.315270288212382,0.8858587585951,0.318909537314974,1.47476983244164,0.690739927463582,0.578596234326046,0,0,0,0.275936746304732,119.289088360929,104.201189380469,1.47541450839008,0.252470927204373,22.7165917979705,17.5697434933487,32.9597798531182,10.2756583119597,16.932699230262,17.2676683781188,25.5030742055183,32.4404002281556,35.1806122372406,109.891890216258,0.141940085208269,0.890328018336276,0.325773918707152,0,1.32745138339963,4.12727081463468,3.62788268357701,2.64047111658257,6.20133975049623,4.30409207121498,6.46070732920553,6.18007340111759,6.06045543254026,0.948110273807448,4.21674434299995,1.03135543248187,94.9826500053069,11.3438489239725,17.8514983620201,18.8616590827801,30.3251799528288,31.9280183507706,34.7198433470475,53.8902959932841,0,0.42366414172764,2.8668691747145,0.98931751764888,0,0.301564624640779,0.477489376012546,0.328281799490123,1.7488850197791,85.1102136228239,0.854354403989263,0.412773735926445,0.185194527369712,0,0.546776910884101,0.228778173206523,0,0.139951452323658,0.414599921413271,1.90934123603023,4.4287039101359,6.50622294805916,3.02414954301044,1.67270636811575,2.62035076495413,1.34864346384821,2.64491058321075,0.785267825952089,2.20345454596048,1.24267862617385,2.25477175473676,0.897099276263873,0.496375471371293,0.972255941720238,0.516639293910924,0.506868376472335,1.29092962510329,0.13020438484395,0.104859344425711,0.483168241652012,0,0.632022241256357,0.202725215290164,0.102710957164827,0.25984164595559,0.716106782669926,0.39736270956253,0.841368146639782,0.443068581523732,0.403865799792591,0.685861259894999,0.201652370273681,0.38983152295901,0.192423683280659,0.467507608726276,2.94749498699775,0.221985953374065,0.179427713218951,0.167884616364078,1.35232715822533,0,0.549454872801795,1.71494703263253,0.501572104035363,121.986398005286,116.462284836316,120.308057822273,117.89128308777,147.977824270459,160.898900144006,168.08060255772,138.69893059306,151.349564600724,147.561688849269,15.3605274424581,16.3600198094423,26.8051761033991,12.8846560046196,20.7517031001702,15.6266982182512,11.3345831178824,16.2767695218726,14.4413644316317,11.1186773176071,13.4344028941827,12.0720858487089,12.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|short_description=p1@Rundc3a
}}
}}

Latest revision as of 18:19, 26 September 2015

Short description:p1@Rundc3a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rundc3a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_uc007lrq.2, uc007lrr.2_5end
EntrezGene:Rundc3a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rundc3a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G741.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A329.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.88
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3109.25
Mouse Granule cells, donor2.CNhs12357.11731-123E3123.25
Mouse Granule cells, donor3.CNhs12108.11636-122C795.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C812.88
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D586.89
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F585.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D986.44
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1112.26
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D590.78
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D284.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2112.62
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D673.54
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3176.19
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3140.33
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7134.41
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4115.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4125.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8101.58
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4150.20
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5123.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6128.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D681.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F676.60
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E198.79
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F98.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.30
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D718.26
adrenal gland, embryo E14.CNhs11038.406-44C521.69
adrenal gland, embryo E16.CNhs11004.1254-43D619.49
adrenal gland, embryo E17.CNhs11043.1263-45I116.37
adrenal gland, embryo E18.CNhs11026.1262-18F522.91
adrenal gland, neonate N00.CNhs11191.1311-23C116.34
adrenal gland, neonate N25.CNhs11223.1377-27I39.93
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B2126.77
cerebellum, neonate N30.CNhs11135.1395-42I2132.37
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4101.11
corpus striatum, adult.CNhs10487.19-21D8106.14
corpus striatum, neonate N00.CNhs11226.630-43F199.64
cortex, adult.CNhs10473.12-14D5158.18
cortex, neonate N30.CNhs11107.1392-42F2187.70
diencephalon, adult.CNhs10482.20-12F2118.85
diencephalon, neonate N30.CNhs11201.1388-42B2117.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G413.05
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E222.76
eyeball, embryo E15.CNhs10593.426-16C921.79
eyeball, embryo E17.CNhs11023.1261-18D420.95
eyeball, neonate N00.CNhs11207.633-15C626.60
eyeball, neonate N01.CNhs11140.1532-43E730.11
eyeball, neonate N02.CNhs11205.1551-44G838.32
eyeball, neonate N16.CNhs11188.777-19A238.81
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E8137.11
hippocampus, neonate N00.CNhs11228.627-43G164.73
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C2119.29
medulla oblongata, neonate N30.CNhs11200.1396-42A3104.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E122.72
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.57
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E332.96
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.28
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.93
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D425.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D532.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D635.18
olfactory brain, adult.CNhs10489.18-22I9109.89
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G96.46
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G894.98
pituitary gland, embryo E12.CNhs11018.346-16E611.34
pituitary gland, embryo E13.CNhs11009.370-44C717.85
pituitary gland, embryo E14.CNhs11037.398-44A518.86
pituitary gland, embryo E15.CNhs10592.427-16B930.33
pituitary gland, embryo E16.CNhs11036.449-43F631.93
pituitary gland, embryo E17.CNhs11039.1265-44F534.72
pituitary gland, neonate N00.CNhs11190.1308-22E953.89
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C985.11
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G86.51
stomach, embryo E16.CNhs11022.459-17D43.02
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.64
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1121.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2116.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3120.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7117.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4147.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5160.90
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6168.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7138.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8151.35
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9147.56
whole body, embryo E11.CNhs11014.324-5I815.36
whole body, embryo E12.CNhs10587.857-27C916.36
whole body, embryo E13.CNhs10512.372-23H226.81
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B120.75
whole body, embryo E16.CNhs10514.453-14F215.63
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.12
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.43
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.96
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.39
whole body, embryo E17.5.CNhs10513.490-9F910.42
whole body, embryo E17.CNhs10517.475-3I539.47
whole body, embryo E18.CNhs10516.493-3B314.50
whole body, neonate N00.CNhs10525.657-19C210.74
whole body, neonate N01.CNhs10576.659-23C64.78
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell9.48e-1944
neurectodermal cell9.48e-1944
neuron2.13e-1833
neuronal stem cell2.13e-1833
neuroblast2.13e-1833
electrically signaling cell2.13e-1833
neural cell2.22e-1843
CNS neuron (sensu Vertebrata)5.11e-1523
neuroblast (sensu Vertebrata)5.11e-1523
electrically responsive cell6.84e-1339
electrically active cell6.84e-1339

Uber anatomy
Ontology termp-valuen
central nervous system3.82e-4073
nervous system3.93e-4075
ectoderm-derived structure1.10e-3695
ectoderm1.10e-3695
presumptive ectoderm1.10e-3695
neurectoderm1.36e-3464
neural plate1.36e-3464
presumptive neural plate1.36e-3464
regional part of nervous system1.08e-3154
neural tube9.69e-3052
neural rod9.69e-3052
future spinal cord9.69e-3052
neural keel9.69e-3052
ecto-epithelium9.67e-2973
brain9.47e-2747
future brain9.47e-2747
pre-chordal neural plate4.14e-2649
regional part of brain4.47e-2646
structure with developmental contribution from neural crest3.28e-2392
anterior neural tube6.03e-2340
regional part of forebrain2.50e-2239
forebrain2.50e-2239
future forebrain2.50e-2239
gray matter1.13e-2034
brain grey matter7.38e-1829
regional part of telencephalon7.38e-1829
telencephalon7.38e-1829
cerebral cortex1.27e-1221
cerebral hemisphere1.27e-1221
pallium1.27e-1221
regional part of cerebral cortex2.51e-1017
occipital lobe1.86e-0810
visual cortex1.86e-0810
neocortex1.86e-0810
posterior neural tube3.38e-0712
chordal neural plate3.38e-0712
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