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FFCP PHASE1:Mm9::chr11:105898181..105898238,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:105898181..105898238,+
|DHSsupport=NA
|short_description=p1@Dcaf7
|DPIdataset=NA
|description=CAGE_peak_1_at_Dcaf7_5end
|association_with_transcript=0bp_to_ENSMUST00000058438,ENSMUST00000106891,NM_027946,uc007lxy.1,uc007lxz.1_5end
|EntrezGene=71833
|EntrezGene=71833
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=P61963,B1AR85,Q80ZU1
|UniProt=P61963,B1AR85,Q80ZU1
|association_with_transcript=0bp_to_ENSMUST00000058438,ENSMUST00000106891,NM_027946,uc007lxy.1,uc007lxz.1_5end
|cluster_id=chr11:105898181..105898238,+
|description=CAGE_peak_1_at_Dcaf7_5end
|id=chr11:105898181..105898238,+
|ontology_enrichment_celltype=CL:0000117!4.55e-14!23;CL:0000337!4.55e-14!23;CL:0000540!6.88e-10!33;CL:0000047!6.88e-10!33;CL:0000031!6.88e-10!33;CL:0000404!6.88e-10!33;CL:0000393!1.87e-09!39;CL:0000211!1.87e-09!39;CL:0002319!7.34e-09!43;CL:0000221!9.46e-09!44;CL:0000133!9.46e-09!44;CL:0000055!4.64e-08!50;CL:0002371!7.93e-07!118
|ontology_enrichment_celltype_v019_2=CL:0000117,4.55e-14,23;CL:0000337,4.55e-14,23;CL:0000540,6.88e-10,33;CL:0000047,6.88e-10,33;CL:0000031,6.88e-10,33;CL:0000404,6.88e-10,33;CL:0000393,1.87e-09,39;CL:0000211,1.87e-09,39;CL:0002319,7.34e-09,43;CL:0000221,9.46e-09,44;CL:0000133,9.46e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.66e-22!73;UBERON:0005743!2.66e-22!73;UBERON:0001049!1.10e-21!52;UBERON:0005068!1.10e-21!52;UBERON:0006241!1.10e-21!52;UBERON:0007135!1.10e-21!52;UBERON:0000073!2.02e-21!75;UBERON:0001016!2.02e-21!75;UBERON:0000955!3.68e-20!50;UBERON:0006238!3.68e-20!50;UBERON:0002616!1.36e-19!49;UBERON:0002020!5.38e-19!34;UBERON:0003080!3.00e-17!40;UBERON:0002780!6.19e-17!39;UBERON:0001890!6.19e-17!39;UBERON:0006240!6.19e-17!39;UBERON:0002791!1.40e-15!29;UBERON:0003528!1.40e-15!29;UBERON:0001893!1.40e-15!29;UBERON:0000033!6.76e-15!63;UBERON:0007811!1.99e-14!86;UBERON:0004121!3.19e-14!102;UBERON:0000924!3.19e-14!102;UBERON:0006601!3.19e-14!102;UBERON:0003056!6.65e-14!49;UBERON:0002346!1.27e-13!71;UBERON:0003075!1.27e-13!71;UBERON:0007284!1.27e-13!71;UBERON:0000153!7.09e-13!94;UBERON:0000956!2.52e-11!21;UBERON:0001869!2.52e-11!21;UBERON:0000203!2.52e-11!21;UBERON:0000064!2.26e-10!99;UBERON:0002619!2.11e-09!17;UBERON:0002021!2.64e-07!10;UBERON:0000411!2.64e-07!10;UBERON:0001950!2.64e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.33e-23,54;UBERON:0001017,2.66e-22,73;UBERON:0001049,1.10e-21,52;UBERON:0005068,1.10e-21,52;UBERON:0006241,1.10e-21,52;UBERON:0007135,1.10e-21,52;UBERON:0001016,2.02e-21,75;UBERON:0002020,5.38e-19,34;UBERON:0000955,1.59e-18,47;UBERON:0006238,1.59e-18,47;UBERON:0002616,5.73e-18,46;UBERON:0002346,2.95e-17,64;UBERON:0003075,2.95e-17,64;UBERON:0007284,2.95e-17,64;UBERON:0003080,3.00e-17,40;UBERON:0004121,4.37e-17,95;UBERON:0000924,4.37e-17,95;UBERON:0006601,4.37e-17,95;UBERON:0002780,6.19e-17,39;UBERON:0001890,6.19e-17,39;UBERON:0006240,6.19e-17,39;UBERON:0010371,1.08e-15,73;UBERON:0003528,1.40e-15,29;UBERON:0002791,1.40e-15,29;UBERON:0001893,1.40e-15,29;UBERON:0003056,6.65e-14,49;UBERON:0000956,2.52e-11,21;UBERON:0001869,2.52e-11,21;UBERON:0000203,2.52e-11,21;UBERON:0002619,2.11e-09,17;UBERON:0002021,2.64e-07,10;UBERON:0000411,2.64e-07,10;UBERON:0001950,2.64e-07,10;UBERON:0010314,7.52e-07,92
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04,39.6472960897355,37.9098746284522,39.0995113547056,32.9727471256728,35.8739161383623,37.1114016206758,34.5517843418919,35.9033476018266,27.9602690889117,229.423026044465,36.6315537807748,32.5953226200482,47.4460899559476,42.2352622772181,35.4807863530634,34.2683136845602,34.7645707533347,28.1023043060905,76.5821663018439,117.804272559467,47.4016680942267,35.0714622451984,37.4894993651619,36.6376720797382,42.0712734818581,42.3191285684094,37.5009802502303,41.5007571360562,41.4972109286887,39.0940918140149,39.3222122033678,40.0551889840382,34.155203782317,35.9980858719232,37.1837829128947,47.5049940220498,31.489563669926,38.7813463801021,38.2515396183737,30.2168785476403,31.1357761254351,42.444939057655,32.1006146582633,102.220083513689,104.954153923636,125.464117443228,86.9577102659059,114.408780801697,102.733570044999,94.5031500324528,102.222913131898,84.2844880710621,100.963260791605,41.5149390336707,50.6761589219309,42.8541350442877,40.3557150333368,54.4994222832754,51.2923388575539,40.8933979154972,41.0009763905399,38.5103051510178,36.3883984939868,42.0775637817798,45.2703219326583,42.7941689137363,41.0401226915212,39.5156026414619,38.579788993929,46.3537303779422,38.7747533132047,38.7360746755108,47.2508533631415,45.9444798196457,39.7545805796916,40.5341522910446,40.9876894903166,44.7960650776974,36.7227398249876,37.5002344389184,36.829759601298,38.7041724460706,38.1576744727262,39.8613660897225,43.0464587981212,42.9692595328174,37.8045892493757,40.896201528002,59.7047281271691,40.0023050441648,40.6106292151284,30.2235564668773,39.9270468606323,33.8527040005815
|phase1_expression=34.9124486688451,65.6073766361999,60.5148988388083,66.8445906988094,61.6101747834007,40.7946630745892,39.2469236200483,46.7426430858506,36.745856481585,34.407485369333,54.2760959274851,47.3846624432298,58.8930510963348,45.8957112699736,53.6306716523217,51.4287179170158,59.4627596408925,48.2657112998104,52.3777136373922,56.01943403734,59.1901299451446,25.5177744586275,27.4259778595882,45.7578329189143,41.9818984352921,56.274732483272,56.8605834929979,44.602545165979,36.8645433745365,41.3329412806286,27.9380443425684,48.8973618563916,59.0462196081187,63.3926724061755,34.9510459899042,33.9118676531324,35.933806702177,63.1982762412731,59.3814861838088,51.3053269094322,58.2349173150704,59.4249571913848,52.9206284803957,40.4128785701603,41.3617879375619,33.0384153891027,53.2026114156667,35.7561256463932,40.2025714404083,49.5796242639423,44.0957228119892,31.6255641602937,53.1870861203024,92.8463541774521,71.2518854182024,41.4187692017875,43.8396163106298,66.0060278115126,105.002243186131,129.602789921648,113.455821227606,56.5870368555451,40.9075606211124,56.2437323300874,54.3876499411836,67.4956109198795,53.0292195617576,51.1010346077668,72.6864182282428,77.8984264173855,72.7724366275782,139.112029404652,135.392415603339,82.1913262732342,81.7561867785556,80.8912532216818,82.5869107495415,77.1231522034534,71.7342510306657,108.146755938759,110.700048758916,96.8898869235574,73.983494735366,62.4666497135165,71.3567817117703,129.047320437466,112.046512788894,101.401298528964,34.152513193266,39.7506406161692,41.1607573956382,28.3939879403858,14.2793980078628,22.6675340487883,18.1937396885347,27.7776670000348,31.3191056893807,24.0306754835061,16.8860902991865,25.4404493647445,39.8586877968006,97.5281228348816,178.363667794652,234.652012040599,35.5045307258391,35.7237410319889,30.8369911459018,29.3452570877984,44.0194402200192,37.4074190443358,32.6152414320335,31.9688752227748,35.284171080177,37.9821054192609,37.9811524048327,27.5209835011989,39.5511948374998,24.581890676385,34.4998115260451,32.1916031395344,32.4637032136779,25.6983884161668,50.325775528893,53.2861050561016,70.5835401961344,38.8294723917059,28.2763693833972,22.7963037777495,24.2704133709554,54.6735833827603,75.945100067892,99.14128381705,76.8303495249862,71.6003280524925,58.3884405212364,68.7902955407292,36.9676890776648,32.9678472116747,39.1720275572196,46.0867664391378,34.6120378280792,33.7956093517205,37.632985129318,35.2649273735573,36.2634540476577,38.4341160854549,41.8846708781988,53.0341910014982,37.2932627773817,39.5231707550742,38.7092473160687,33.9753385262741,36.9802841470045,39.700746983527,36.0118738713901,34.4329281595993,27.3863143052162,23.1613116403244,22.4489164522518,34.1757524683578,33.3027005173157,24.488440358698,32.1972840395886,35.2207974827853,30.6991554645883,32.7872862098075,31.6562613651551,28.1404475104878,33.4056495324365,32.5051578876609,32.1032485801589,31.4329972964464,37.1039694841876,29.6596185460422,71.7088724603674,69.1518995188791,57.1624494561971,46.2788491661203,44.1506678607934,39.4802342162745,38.1447685513396,40.3367049246685,37.5818894097831,42.6105402492133,46.5038480313621,47.1039010510671,39.7109629904426,41.5819026566005,46.986344995708,39.5480539807857,38.2564348278209,52.9715786856617,31.1055357563054,30.3901043541879,30.4310886317317,36.0462850286206,29.4807780494791,27.1425622975533,35.4124607895841,26.717436784308,31.399745568275,28.2579505380923,16.008441862706,37.3733036804051,39.704917012867,36.4276622063463,45.8463874338017,39.7942313591488,31.0643539173332,31.3588789821384,26.7523124178808,26.6324570792439,33.0666875012915,34.9812490808393,26.8352398878522,30.3094653536534,24.3980482389801,24.6046195895317,41.9389741678193,34.6769283539987,40.4153141576224,40.0598402429444,39.8973422090454,36.6838703797576,31.4217605969538,29.2700471786698,38.778245450123,36.9846031713454,36.1962324852496,38.8356055876299,39.0268059016924,36.3069137039594,52.7769493787453,33.1782467129413,39.3411418415229,28.6974216156922,49.6101323062277,50.2838135480552,35.0820783106085,33.0736914637729,35.652428794037,37.8725581967739,40.0687519783006,37.9960388744558,38.5441706162542,44.1599388030579,40.8858808691643,36.8242380968253,42.6910800182245,81.2942930547172,32.9300997683183,41.4892856544705,37.7897745700296,34.1488154553148,39.8235415019888,31.8042633363026,36.2788268357701,38.4754362702032,40.7516612175466,33.817866273832,29.7192537143454,39.6251765130481,33.8672509465485,38.8725212261054,30.5713964867496,30.9406629744561,49.0233032285455,39.6134406868882,43.9819524861365,48.2258328821083,47.7045228497716,53.5106452806212,43.6054904595621,57.2394104335447,28.395276675709,26.6908409288413,40.797753640168,47.8170133530292,40.5275711006723,38.9018365786605,44.645256657173,43.9897611316764,41.9732404746985,53.0316363750058,44.4264290074417,45.6114978198722,34.6313766181361,44.4549558531071,36.9074414846768,34.3167259809784,28.7263546689615,27.8503390124079,28.4691946037113,23.8667654503778,36.22047126504,39.6472960897355,37.9098746284522,39.0995113547056,32.9727471256728,35.8739161383623,37.1114016206758,34.5517843418919,35.9033476018266,27.9602690889117,229.423026044465,36.6315537807748,32.5953226200482,47.4460899559476,42.2352622772181,35.4807863530634,34.2683136845602,34.7645707533347,28.1023043060905,76.5821663018439,117.804272559467,47.4016680942267,35.0714622451984,37.4894993651619,36.6376720797382,42.0712734818581,42.3191285684094,37.5009802502303,41.5007571360562,41.4972109286887,39.0940918140149,39.3222122033678,40.0551889840382,34.155203782317,35.9980858719232,37.1837829128947,47.5049940220498,31.489563669926,38.7813463801021,38.2515396183737,30.2168785476403,31.1357761254351,42.444939057655,32.1006146582633,102.220083513689,104.954153923636,125.464117443228,86.9577102659059,114.408780801697,102.733570044999,94.5031500324528,102.222913131898,84.2844880710621,100.963260791605,41.5149390336707,50.6761589219309,42.8541350442877,40.3557150333368,54.4994222832754,51.2923388575539,40.8933979154972,41.0009763905399,38.5103051510178,36.3883984939868,42.0775637817798,45.2703219326583,42.7941689137363,41.0401226915212,39.5156026414619,38.579788993929,46.3537303779422,38.7747533132047,38.7360746755108,47.2508533631415,45.9444798196457,39.7545805796916,40.5341522910446,40.9876894903166,44.7960650776974,36.7227398249876,37.5002344389184,36.829759601298,38.7041724460706,38.1576744727262,39.8613660897225,43.0464587981212,42.9692595328174,37.8045892493757,40.896201528002,59.7047281271691,40.0023050441648,40.6106292151284,30.2235564668773,39.9270468606323,33.8527040005815
|short_description=p1@Dcaf7
}}
}}

Latest revision as of 19:58, 26 September 2015

Short description:p1@Dcaf7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dcaf7_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000058438, ENSMUST00000106891, NM_027946, uc007lxy.1, uc007lxz.1_5end
EntrezGene:Dcaf7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dcaf7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G734.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I565.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I660.51
CD326+ enterocyte, pool1.CNhs13542.11848-124I366.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I461.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I740.79
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I839.25
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E946.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E736.75
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F234.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E654.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F147.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E458.89
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E845.90
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A153.63
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A351.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A559.46
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A248.27
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A452.38
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A656.02
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A359.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H225.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I927.43
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D145.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D241.98
GP2+ M cell, pool1.CNhs13228.11845-124H956.27
GP2+ M cell, pool2.CNhs13231.11846-124I156.86
GP2+ M cell, pool3.CNhs13240.11847-124I244.60
Ileum epithelium, pool1.CNhs13199.10252-104B936.86
Ileum epithelium, pool2.CNhs13232.10253-104C141.33
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I348.90
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G659.05
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F534.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F633.91
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F735.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G863.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H159.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H351.31
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G958.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H259.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H452.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D840.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D941.36
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B333.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B753.20
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C235.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B840.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C349.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C444.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C431.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A253.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I992.85
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A171.25
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C141.42
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E143.84
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C566.01
Mouse Granule cells, donor1.CNhs12131.11713-123C3105.00
Mouse Granule cells, donor2.CNhs12357.11731-123E3129.60
Mouse Granule cells, donor3.CNhs12108.11636-122C7113.46
Mouse Meningeal cells, donor1.CNhs12132.11716-123C656.59
Mouse Meningeal cells, donor3.CNhs12109.11639-122D140.91
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C756.24
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E754.39
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D267.50
Mouse Microglia, donor1.CNhs12629.11718-123C853.03
Mouse Microglia, donor2.CNhs12634.11736-123E851.10
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D572.69
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F577.90
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D972.77
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1139.11
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5135.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D282.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F281.76
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D680.89
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D382.59
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F377.12
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D771.73
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4108.15
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4110.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D896.89
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E473.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E562.47
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I671.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6129.05
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6112.05
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1101.40
Mouse Schwann, donor1.CNhs12507.11728-123D934.15
Mouse Schwann, donor2.CNhs12573.11746-123F939.75
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G341.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F728.39
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C822.67
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F627.78
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.03
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I825.44
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G639.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H197.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8178.36
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6234.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G135.50
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G235.72
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G330.84
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B629.35
accessory axillary lymph node, adult.CNhs10475.1063-29H944.02
adrenal gland, adult.CNhs10508.49-24D737.41
adrenal gland, embryo E14.CNhs11038.406-44C532.62
adrenal gland, embryo E16.CNhs11004.1254-43D631.97
adrenal gland, embryo E17.CNhs11043.1263-45I135.28
adrenal gland, embryo E18.CNhs11026.1262-18F537.98
adrenal gland, neonate N00.CNhs11191.1311-23C137.98
adrenal gland, neonate N25.CNhs11223.1377-27I327.52
amnion, adult pregnant day17.5.CNhs10488.583-22A839.55
aorta, adult.CNhs10498.46-23H124.58
bone (os femoris), adult.CNhs10483.56-12G234.50
bone (os femoris), neonate N02.CNhs11227.1985-43F532.19
bone (os femoris), neonate N16.CNhs11225.1525-43A632.46
bone (os femoris), neonate N20.CNhs11195.1350-25C325.70
cecum, adult.CNhs10467.37-13H450.33
cerebellum, adult.CNhs10494.15-8B253.29
cerebellum, neonate N30.CNhs11135.1395-42I270.58
colon, adult.CNhs10468.36-18H738.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C728.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D424.27
corpora quadrigemina, adult.CNhs10501.16-22A454.67
corpus striatum, adult.CNhs10487.19-21D875.95
corpus striatum, neonate N00.CNhs11226.630-43F199.14
cortex, adult.CNhs10473.12-14D576.83
cortex, neonate N30.CNhs11107.1392-42F271.60
diencephalon, adult.CNhs10482.20-12F258.39
diencephalon, neonate N30.CNhs11201.1388-42B268.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B136.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A232.97
epididymis, adult.CNhs10490.58-23B239.17
eyeball, adult.CNhs10484.31-12G446.09
eyeball, embryo E12.CNhs11016.345-16C634.61
eyeball, embryo E14.CNhs10521.399-16E233.80
eyeball, embryo E15.CNhs10593.426-16C937.63
eyeball, embryo E17.CNhs11023.1261-18D435.26
eyeball, neonate N00.CNhs11207.633-15C636.26
eyeball, neonate N01.CNhs11140.1532-43E738.43
eyeball, neonate N02.CNhs11205.1551-44G841.88
eyeball, neonate N16.CNhs11188.777-19A253.03
forelimb, embryo E11.CNhs10596.335-25E237.29
forelimb, embryo E12.CNhs10600.359-14H239.52
forelimb, embryo E13.CNhs10589.384-1E238.71
forelimb, embryo E14.CNhs10577.413-26A833.98
forelimb, embryo E15.CNhs11007.437-20E736.98
forelimb, embryo E17.CNhs10598.1517-43C439.70
forelimb, embryo E18.CNhs11008.1520-43B536.01
gonad, embryo E13.CNhs11044.1564-45I634.43
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C827.39
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D223.16
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D522.45
heart, embryo E11.CNhs10586.331-24E934.18
heart, embryo E12.CNhs11015.353-12F533.30
heart, embryo E13.CNhs11013.376-3I924.49
heart, embryo E14.CNhs10597.403-26D432.20
heart, embryo E15.CNhs11017.431-16C835.22
heart, embryo E16.CNhs11021.457-17C630.70
heart, embryo E17.CNhs11025.479-18E532.79
heart, embryo E18.CNhs11030.1283-20G331.66
heart, neonate N00.CNhs11213.639-21E328.14
heart, neonate N03.CNhs11221.1349-25I233.41
heart, neonate N10.CNhs11118.749-24G132.51
heart, neonate N16.CNhs11209.782-15G132.10
heart, neonate N20.CNhs11127.821-26I631.43
heart, neonate N25.CNhs11196.1351-25D337.10
heart, neonate N30.CNhs11202.1390-42D229.66
hippocampus, adult.CNhs10478.13-16E871.71
hippocampus, neonate N00.CNhs11228.627-43G169.15
intestinal mucosa, adult.CNhs10506.860-29I357.16
intestine, adult.CNhs10496.178-9A346.28
intestine, embryo E12.CNhs11019.1251-16I544.15
intestine, embryo E13.CNhs11010.381-16D539.48
intestine, embryo E15.CNhs10602.976-16D838.14
intestine, embryo E16.CNhs10585.463-22H440.34
intestine, embryo E17.CNhs10582.482-18D337.58
intestine, embryo E18.CNhs10526.1289-20F742.61
intestine, neonate N00.CNhs11126.644-26D146.50
intestine, neonate N01.CNhs11192.1322-23E947.10
intestine, neonate N06.CNhs11102.688-20B839.71
intestine, neonate N07.CNhs11095.720-20F241.58
intestine, neonate N10.CNhs11098.755-23A546.99
intestine, neonate N20.CNhs11187.827-18D139.55
intestine, neonate N25.CNhs11121.1352-25E338.26
intestine, neonate N30.CNhs11131.1384-42G152.97
kidney, embryo E14.CNhs10606.411-4I931.11
kidney, embryo E15.CNhs10997.434-16F830.39
kidney, embryo E16.CNhs10584.464-22A530.43
kidney, embryo E17.CNhs11028.483-18I236.05
kidney, embryo E18.CNhs11001.1288-20C729.48
kidney, neonate N00.CNhs11214.646-21G727.14
kidney, neonate N10.CNhs11206.758-6D535.41
kidney, neonate N20.CNhs11113.832-19I126.72
kidney, neonate N25.CNhs11122.1353-25F331.40
kidney, neonate N30.CNhs11203.1385-42H128.26
liver, adult pregnant day01.CNhs10466.508-5B216.01
liver, embryo E12.CNhs10601.355-15F837.37
liver, embryo E13.CNhs10524.378-3H639.70
liver, embryo E14.CNhs10594.409-16E136.43
liver, embryo E15.CNhs10520.433-16D745.85
liver, embryo E16.CNhs10523.462-17F539.79
liver, embryo E17.CNhs10510.481-18A331.06
liver, embryo E18.CNhs10579.499-43G431.36
liver, neonate N00.CNhs11117.641-24F426.75
liver, neonate N03.CNhs11123.1345-25G226.63
liver, neonate N06.CNhs11101.684-20A833.07
liver, neonate N07.CNhs11103.716-20H234.98
liver, neonate N10.CNhs11115.751-24B926.84
liver, neonate N20.CNhs11220.823-25A330.31
liver, neonate N25.CNhs11198.1368-26H124.40
liver, neonate N30.CNhs11106.1382-42D124.60
lung, adult.CNhs10474.28-22B141.94
lung, embryo E12.CNhs10522.354-16G234.68
lung, embryo E14.CNhs10604.404-26F840.42
lung, embryo E15.CNhs11020.432-17C540.06
lung, embryo E16.CNhs10998.458-17B639.90
lung, embryo E17.CNhs10605.480-44A636.68
lung, embryo E18.CNhs10583.1287-20I631.42
lung, neonate N00.CNhs11224.640-42C629.27
lung, neonate N06.CNhs11212.683-20E538.78
lung, neonate N07.CNhs11111.715-19A336.98
lung, neonate N10.CNhs11219.750-23E636.20
lung, neonate N20.CNhs11109.822-18A438.84
lung, neonate N25.CNhs11119.1359-25C739.03
lung, neonate N30.CNhs11133.1394-42H236.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A152.78
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A133.18
mammary gland, adult lactating day02.CNhs10480.595-22B639.34
mammary gland, adult pregnant day19.CNhs10476.588-5H228.70
medulla oblongata, adult.CNhs10477.17-12C249.61
medulla oblongata, neonate N30.CNhs11200.1396-42A350.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C735.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C233.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E135.65
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E237.87
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E340.07
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D738.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D838.54
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D944.16
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D440.89
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D536.82
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D642.69
olfactory brain, adult.CNhs10489.18-22I981.29
ovary, adult.CNhs10507.91-2I732.93
ovary, embryo E18.CNhs11040.505-44H741.49
ovary, neonate N00.CNhs11217.1299-22I437.79
oviduct, adult pregnant day01.CNhs10500.988-6G634.15
pancreas, adult.CNhs10486.34-16E439.82
pancreas, embryo E14.CNhs11012.405-44F431.80
pancreas, embryo E15.CNhs11042.1556-45F236.28
pancreas, embryo E16.CNhs11003.460-26E538.48
pancreas, embryo E17.CNhs10599.1558-45G340.75
pancreas, embryo E18.CNhs10580.1535-43I733.82
pancreas, neonate N00.CNhs11105.645-26G929.72
pancreas, neonate N01.CNhs11138.1531-43D739.63
pancreas, neonate N02.CNhs11139.1539-43D833.87
pancreas, neonate N16.CNhs11136.787-43B638.87
pancreas, neonate N25.CNhs11094.1555-45E230.57
pancreas, neonate N30.CNhs11182.1548-44H530.94
pituitary gland, adult.CNhs10493.21-1G849.02
pituitary gland, embryo E12.CNhs11018.346-16E639.61
pituitary gland, embryo E13.CNhs11009.370-44C743.98
pituitary gland, embryo E14.CNhs11037.398-44A548.23
pituitary gland, embryo E15.CNhs10592.427-16B947.70
pituitary gland, embryo E16.CNhs11036.449-43F653.51
pituitary gland, embryo E17.CNhs11039.1265-44F543.61
pituitary gland, neonate N00.CNhs11190.1308-22E957.24
placenta, adult pregnant day10.CNhs10472.539-13I728.40
placenta, adult pregnant day17.CNhs10464.577-18G326.69
prostate, adult.CNhs10470.859-1F840.80
skin, adult.CNhs10492.30-1C347.82
skin, neonate N00.CNhs11124.650-25G440.53
skin, neonate N03.CNhs11215.662-22H338.90
skin, neonate N06.CNhs11097.693-20I544.65
skin, neonate N10.CNhs11108.762-6C443.99
small intestine, neonate N16.CNhs11114.790-21I141.97
spinal cord, adult.CNhs10505.24-13C953.03
spleen, adult.CNhs10465.25-2G244.43
spleen, embryo E16.CNhs11035.461-43C145.61
spleen, embryo E18.CNhs11011.1271-21F234.63
spleen, neonate N10.CNhs11116.752-24D144.45
spleen, neonate N20.CNhs11112.824-19H136.91
spleen, neonate N25.CNhs11099.1354-25G334.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C628.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C927.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D328.47
stomach, adult.CNhs10503.33-1H623.87
stomach, embryo E12.CNhs10588.356-43E336.22
stomach, embryo E15.CNhs10603.1252-16G839.65
stomach, embryo E16.CNhs11022.459-17D437.91
stomach, embryo E17.CNhs11006.1035-18D539.10
stomach, embryo E18.CNhs10999.1286-20C632.97
stomach, neonate N03.CNhs11193.1340-24B835.87
stomach, neonate N07.CNhs11210.718-18A937.11
stomach, neonate N25.CNhs11104.1355-25E434.55
stomach, neonate N30.CNhs11134.1386-42I135.90
submandibular gland, adult.CNhs10469.59-29C127.96
testis, adult.CNhs10504.57-7G5229.42
testis, embryo E13.CNhs11031.389-23F536.63
testis, embryo E15.CNhs11034.443-27C532.60
testis, embryo E16.CNhs11033.470-26G547.45
testis, embryo E17.CNhs11029.486-18I542.24
testis, embryo E18.CNhs11027.503-18G535.48
testis, neonate N00.CNhs11189.1300-22B734.27
testis, neonate N07.CNhs11222.726-26I434.76
testis, neonate N10.CNhs11204.763-44D928.10
testis, neonate N20.CNhs11110.839-18H376.58
testis, neonate N30.CNhs11130.1391-42E2117.80
thymus, adult.CNhs10471.38-12B547.40
thymus, embryo E14.CNhs11041.402-44I435.07
thymus, embryo E15.CNhs11005.430-45I237.49
thymus, embryo E16.CNhs11002.456-26C536.64
thymus, embryo E17.CNhs10581.478-18C142.07
thymus, embryo E18.CNhs10595.1273-19G442.32
thymus, neonate N02.CNhs11181.1541-43F837.50
thymus, neonate N03.CNhs11137.2104-43C741.50
thymus, neonate N06.CNhs11197.681-26C441.50
thymus, neonate N07.CNhs11211.713-19D339.09
thymus, neonate N10.CNhs11194.748-24E439.32
thymus, neonate N20.CNhs11186.820-7A240.06
thymus, neonate N25.CNhs11125.1362-25G734.16
thymus, neonate N30.CNhs11132.1393-42G236.00
tongue, adult.CNhs10499.32-1B437.18
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H347.50
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F731.49
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G538.78
urinary bladder, adult.CNhs10481.879-12E438.25
uterus, adult pregnant day19.CNhs10497.590-15F530.22
uterus, adult.CNhs10509.92-27E531.14
vagina, adult.CNhs10502.89-27D542.44
vesicular gland, adult.CNhs10491.51-27F832.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1102.22
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2104.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3125.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D786.96
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4114.41
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5102.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A694.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7102.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A884.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9100.96
whole body, embryo E11.CNhs11014.324-5I841.51
whole body, embryo E12.CNhs10587.857-27C950.68
whole body, embryo E13.CNhs10512.372-23H242.85
whole body, embryo E14.5.CNhs10578.420-27D240.36
whole body, embryo E14.CNhs10519.395-14B154.50
whole body, embryo E16.CNhs10514.453-14F251.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G540.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G541.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G538.51
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G536.39
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G542.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G545.27
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G542.79
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G541.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G539.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G538.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G546.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G538.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G538.74
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G547.25
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G545.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G539.75
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G540.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G540.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G544.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G536.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G537.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G536.83
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G538.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G538.16
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G539.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G543.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G542.97
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G537.80
whole body, embryo E17.5.CNhs10513.490-9F940.90
whole body, embryo E17.CNhs10517.475-3I559.70
whole body, embryo E18.CNhs10516.493-3B340.00
whole body, neonate N00.CNhs10525.657-19C240.61
whole body, neonate N01.CNhs10576.659-23C630.22
whole body, neonate N06.CNhs10515.692-21D139.93
whole body, neonate N10.CNhs10518.761-6B433.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.55e-1423
neuroblast (sensu Vertebrata)4.55e-1423
neuron6.88e-1033
neuronal stem cell6.88e-1033
neuroblast6.88e-1033
electrically signaling cell6.88e-1033
electrically responsive cell1.87e-0939
electrically active cell1.87e-0939
neural cell7.34e-0943
ectodermal cell9.46e-0944
neurectodermal cell9.46e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.33e-2354
central nervous system2.66e-2273
neural tube1.10e-2152
neural rod1.10e-2152
future spinal cord1.10e-2152
neural keel1.10e-2152
nervous system2.02e-2175
gray matter5.38e-1934
brain1.59e-1847
future brain1.59e-1847
regional part of brain5.73e-1846
neurectoderm2.95e-1764
neural plate2.95e-1764
presumptive neural plate2.95e-1764
anterior neural tube3.00e-1740
ectoderm-derived structure4.37e-1795
ectoderm4.37e-1795
presumptive ectoderm4.37e-1795
regional part of forebrain6.19e-1739
forebrain6.19e-1739
future forebrain6.19e-1739
ecto-epithelium1.08e-1573
brain grey matter1.40e-1529
regional part of telencephalon1.40e-1529
telencephalon1.40e-1529
pre-chordal neural plate6.65e-1449
cerebral cortex2.52e-1121
cerebral hemisphere2.52e-1121
pallium2.52e-1121
regional part of cerebral cortex2.11e-0917
occipital lobe2.64e-0710
visual cortex2.64e-0710
neocortex2.64e-0710
structure with developmental contribution from neural crest7.52e-0792
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