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FFCP PHASE1:Mm9::chr15:76077268..76077286,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr15:76077268..76077286,+
|DHSsupport=NA
|short_description=p3@Grina
|DPIdataset=NA
|description=CAGE_peak_3_at_Grina_5end
|association_with_transcript=31bp_to_ENSMUST00000023225,NM_023168,uc007wjl.1_5end
|EntrezGene=66168
|EntrezGene=66168
|HGNC=
|HGNC=
|MCL_coexpression_id=208
|TSSclassifier=NA
|UniProt=Q9ESF4
|UniProt=Q9ESF4
|association_with_transcript=31bp_to_ENSMUST00000023225,NM_023168,uc007wjl.1_5end
|cluster_id=chr15:76077268..76077286,+
|description=CAGE_peak_3_at_Grina_5end
|id=chr15:76077268..76077286,+
|ontology_enrichment_celltype=CL:0000055!2.14e-10!50;CL:0002319!2.95e-09!43;CL:0000221!3.74e-09!44;CL:0000133!3.74e-09!44;CL:0000393!4.42e-08!39;CL:0000211!4.42e-08!39;CL:0000117!2.54e-07!23;CL:0000337!2.54e-07!23;CL:0000540!5.08e-07!33;CL:0000047!5.08e-07!33;CL:0000031!5.08e-07!33;CL:0000404!5.08e-07!33
|ontology_enrichment_celltype_v019_2=CL:0002319,3.05e-09,43;CL:0000221,3.86e-09,44;CL:0000133,3.86e-09,44;CL:0000393,4.68e-08,39;CL:0000211,4.68e-08,39;CL:0000117,2.87e-07,23;CL:0000337,2.87e-07,23;CL:0000540,5.52e-07,33;CL:0000047,5.52e-07,33;CL:0000031,5.52e-07,33;CL:0000404,5.52e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.83e-23!73;UBERON:0005743!8.83e-23!73;UBERON:0000073!9.53e-22!75;UBERON:0001016!9.53e-22!75;UBERON:0004121!4.60e-19!102;UBERON:0000924!4.60e-19!102;UBERON:0006601!4.60e-19!102;UBERON:0001049!1.79e-17!52;UBERON:0005068!1.79e-17!52;UBERON:0006241!1.79e-17!52;UBERON:0007135!1.79e-17!52;UBERON:0000955!7.78e-17!50;UBERON:0006238!7.78e-17!50;UBERON:0002616!2.36e-16!49;UBERON:0000033!3.35e-16!63;UBERON:0002346!4.55e-16!71;UBERON:0003075!4.55e-16!71;UBERON:0007284!4.55e-16!71;UBERON:0002020!9.79e-13!34;UBERON:0003080!3.03e-11!40;UBERON:0003056!3.42e-11!49;UBERON:0002780!1.13e-10!39;UBERON:0001890!1.13e-10!39;UBERON:0006240!1.13e-10!39;UBERON:0002791!2.10e-10!29;UBERON:0003528!2.10e-10!29;UBERON:0001893!2.10e-10!29;UBERON:0004111!5.55e-10!122;UBERON:0000025!2.96e-09!114;UBERON:0007023!4.72e-08!51;UBERON:0003076!1.79e-07!12;UBERON:0003057!1.79e-07!12;UBERON:0002619!1.96e-07!17;UBERON:0002021!3.59e-07!10;UBERON:0000411!3.59e-07!10;UBERON:0001950!3.59e-07!10;UBERON:0000956!7.93e-07!21;UBERON:0001869!7.93e-07!21;UBERON:0000203!7.93e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.84e-23,73;UBERON:0001016,7.51e-22,75;UBERON:0004121,1.06e-19,95;UBERON:0000924,1.06e-19,95;UBERON:0006601,1.06e-19,95;UBERON:0000073,6.27e-19,54;UBERON:0001049,1.60e-17,52;UBERON:0005068,1.60e-17,52;UBERON:0006241,1.60e-17,52;UBERON:0007135,1.60e-17,52;UBERON:0002346,2.65e-17,64;UBERON:0003075,2.65e-17,64;UBERON:0007284,2.65e-17,64;UBERON:0000955,7.06e-15,47;UBERON:0006238,7.06e-15,47;UBERON:0002616,2.10e-14,46;UBERON:0010371,3.89e-14,73;UBERON:0010314,1.41e-13,92;UBERON:0002020,9.98e-13,34;UBERON:0003080,3.08e-11,40;UBERON:0003056,3.28e-11,49;UBERON:0002780,1.16e-10,39;UBERON:0001890,1.16e-10,39;UBERON:0006240,1.16e-10,39;UBERON:0003528,2.25e-10,29;UBERON:0002791,2.25e-10,29;UBERON:0001893,2.25e-10,29;UBERON:0004111,1.00e-09,122;UBERON:0000025,5.34e-09,114;UBERON:0007023,3.59e-08,51;UBERON:0003076,1.53e-07,12;UBERON:0003057,1.53e-07,12;UBERON:0002619,1.67e-07,17;UBERON:0002021,3.08e-07,10;UBERON:0000411,3.08e-07,10;UBERON:0001950,3.08e-07,10;UBERON:0000956,9.09e-07,21;UBERON:0001869,9.09e-07,21;UBERON:0000203,9.09e-07,21
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165458490457098,1.36115831840833,0.904118764344118,2.36538575687089,1.17357238645754,1.0416350787516,0.524296722128554,58.7049413607195,87.5611219023911,0.316011120628178,0.608175645870493,0.821687657318618,0.25984164595559,0,0.79472541912506,0.360586348559907,0.147689527174577,0.302899349844443,0.685861259894999,0.100826185136841,0.584747284438515,0.962118416403295,0.467507608726276,2.49403421976732,0.887943813496259,0.538283139656854,0.839423081820392,3.09103350451505,2.81523713176773,2.01466786693992,2.14368379079066,8.02515366456581,32.7556068717899,38.2069946300957,33.227939779485,31.2772791865511,39.7347861466973,44.5682399459923,35.1011700120539,40.5289082901798,35.345107900768,54.8825930456929,0.207574695168353,0,1.36586884603307,2.43106717068294,1.67690530102386,2.02227859295016,1.77797382241292,2.67845574410562,2.88827288632634,2.52697211763797,1.52087579934144,2.26351609663291,2.62196220915671,2.30490548657529,1.95280594449085,1.42888107384922,2.31768651889711,2.50781986602817,1.64834360321323,2.20798380201596,1.02860775715625,2.12970967391205,1.66905332963125,1.74415699958794,1.78807822789128,1.86152137361688,2.92684756596436,1.57841826862706,2.30866993537965,3.36685362994643,2.01679530811096,2.06859412988683,3.6830793885272,2.01417893541756,0.771626443924566,3.99696924700713,3.04111090979031,4.29742108096597,3.63447830930802,1.98532277207564,1.85494268496337
|phase1_expression=1.60148847104794,1.74487703819681,1.36499771816861,3.32710632437513,0.500895729946347,1.00727563147134,1.40167584357315,0,0.140788722151667,0.234064526321993,0,0,0,0,2.99798785634096,1.01237633694913,4.19737126876888,0.630924330716475,0.411343300817216,0.42438965179803,36.3134848945068,0.992909512008853,1.82839852397255,1.59992422793407,1.83527424853736,0.57423196411502,1.7230479846363,1.50829862880122,5.13063232532209,2.77233142735924,1.55211357458713,0.635030673459631,4.92051830067656,0,0.577703239502549,0.498703936075477,0,2.51118978442145,0.7813353445238,2.09409497589519,8.2352408324342,3.41522742479223,1.45653105909346,7.1761186246079,7.09638518536602,5.13930906052708,13.3006528539167,5.45062890951116,18.2339531669612,22.3594383935426,6.43937539476668,5.75010257459886,1.00669563634642,0,0.336093799142464,2.82985379639542,2.86533439938757,2.57836046138721,7.68802551266472,16.398720357433,6.33831403506179,5.08266798103698,4.4464739805557,4.49949858640699,6.92206453796882,3.5524005747305,9.88680364710736,16.9056054341484,2.07379224616955,2.8351247049655,0.841299845405528,16.5677570954206,14.3564551618549,1.83736198822431,1.24599112323707,2.75765635983006,81.4857519395476,56.3101160955678,54.0694997061977,9.23204014111357,11.7104183811084,8.33461392890816,55.5574168012748,55.1507357831046,40.1859391653011,14.142172102736,14.0947963991112,9.50637173709033,1.59025005999687,1.28471652181535,2.89864488701678,2.58127163094416,11.5595126730318,8.09554787456726,11.695975514058,3.58421509677868,11.7973312910672,1.87473354835864,1.55871602761721,1.7666978725517,2.25349471642689,0,0,0,2.81438353314578,1.01343946190039,2.52762222507392,7.53613606145796,1.03575153458869,3.26572705942614,1.90833859442749,3.04465478312141,2.07553947530453,0.60289056221049,2.4693628498498,1.88499886994513,3.95511948374998,4.19338135067744,4.42305275974937,2.42650274921114,1.32504911076236,1.93950101254089,7.45567044872489,48.3088315069053,43.9838084308256,1.78819938646014,0.239630249011841,0,0.127070227073065,47.6334233307336,21.0450277296568,3.39266750704734,31.8098505951866,30.4301394223093,44.6744295803054,31.474805035145,1.32391173005411,2.86136032403214,4.29628689337247,8.83855794723191,1.17108398666433,0.459804208866946,1.98068342785884,2.41127708537144,3.40182495756639,5.12454881139399,4.96619140166563,15.78090561508,0.862271971731369,1.13463648100692,1.23165786914764,0.657587197282725,1.39023624612799,1.0447564995665,1.23469281844766,0.995171334092466,0,0,0,1.03562886267751,1.64168241986767,0.900310307305074,1.89395788468168,2.36117078096885,1.23413690309903,1.16266972375204,1.87791380979733,1.98501082024188,2.30383789878873,1.97000956894914,3.24275238183423,3.07019973593198,3.07370161407471,2.95254121272818,23.9730541363105,5.9684675179985,8.59088835757875,1.85115396664481,0.426576501070468,0.696710015581316,1.03093969057675,0.80673409849337,2.00140239460383,2.28270751335071,2.37264530772256,3.62337700392824,2.26201687920243,3.78017296878187,2.9244613067868,0.898819408654221,2.59365659849633,3.38540164532424,0.569003702859245,0.571242563048644,2.25415471346161,2.03651327845314,3.29719228184964,2.80543279561274,4.61626721007078,7.0852871030209,5.49495547444812,5.92306386824642,5.63259991465583,0.500535317148282,0.982794975566015,0.899448449539415,1.01430060694251,1.20588579876208,2.03700681425136,2.30156909960649,2.10775794807546,1.37280706594041,1.43768206527355,1.48856379067401,2.18426371180192,2.52578877947112,4.84373016509163,2.41221760681684,1.84753190166605,0.568474235311454,0.325929952884052,0.509235257325564,0.234690248288502,1.34005005953453,1.6663054862021,0.195133647857799,1.10344600874334,1.32878813789265,0.956728611944923,1.3109065177259,1.03610989119537,2.31438493730419,0,1.63171705145613,3.44234991113325,2.20749397043786,53.1422452859591,46.8846746368813,2.95082901678016,7.82659874333556,1.26203287766503,3.12350995437311,5.60100834105277,2.62865677747807,2.45078541490634,1.41538265394416,4.04810701674894,4.38383786866968,3.95287777946523,11.8888887076069,2.12910127812403,1.78065603667255,1.46598263418218,2.63952196756057,11.9470624505967,1.94224508923985,0.906970670894253,2.26326095707078,2.65771703592696,1.53717573971964,3.35956781118687,4.36240475373007,0.712994756769443,2.21225730555071,5.27093042874994,8.25084345985495,7.14923172082955,1.8006109403131,2.32845630808958,1.07168517515796,2.12808280370728,1.96205699362278,3.9491764944509,5.17590413494819,2.3467170806371,2.33015277950202,3.96951116498931,2.80306630000516,0.807322133479528,0.904693873922338,1.19372344003136,0.492422699235184,2.33184669303881,48.5814291267535,1.87957968877638,0.412773735926445,1.66675074632741,1.50694765603753,1.0935538217682,1.60144721244566,0.849892149969277,0.69975726161829,0.276399947608848,1.90934123603023,0.949007980743406,1.62655573701479,0.648032044930808,0.418176592028937,0.87345025498471,1.07891477107857,1.32245529160537,1.04702376793612,2.85152941241944,3.10669656543463,236.75103424736,1.04661582230785,0.165458490457098,1.36115831840833,0.904118764344118,2.36538575687089,1.17357238645754,1.0416350787516,0.524296722128554,58.7049413607195,87.5611219023911,0.316011120628178,0.608175645870493,0.821687657318618,0.25984164595559,0,0.79472541912506,0.360586348559907,0.147689527174577,0.302899349844443,0.685861259894999,0.100826185136841,0.584747284438515,0.962118416403295,0.467507608726276,2.49403421976732,0.887943813496259,0.538283139656854,0.839423081820392,3.09103350451505,2.81523713176773,2.01466786693992,2.14368379079066,8.02515366456581,32.7556068717899,38.2069946300957,33.227939779485,31.2772791865511,39.7347861466973,44.5682399459923,35.1011700120539,40.5289082901798,35.345107900768,54.8825930456929,0.207574695168353,0,1.36586884603307,2.43106717068294,1.67690530102386,2.02227859295016,1.77797382241292,2.67845574410562,2.88827288632634,2.52697211763797,1.52087579934144,2.26351609663291,2.62196220915671,2.30490548657529,1.95280594449085,1.42888107384922,2.31768651889711,2.50781986602817,1.64834360321323,2.20798380201596,1.02860775715625,2.12970967391205,1.66905332963125,1.74415699958794,1.78807822789128,1.86152137361688,2.92684756596436,1.57841826862706,2.30866993537965,3.36685362994643,2.01679530811096,2.06859412988683,3.6830793885272,2.01417893541756,0.771626443924566,3.99696924700713,3.04111090979031,4.29742108096597,3.63447830930802,1.98532277207564,1.85494268496337
|short_description=p3@Grina
}}
}}

Latest revision as of 00:24, 27 September 2015

Short description:p3@Grina
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Grina_5end
Coexpression cluster:MCL_coexpression_mm9:208
Association with transcript: 31bp_to_ENSMUST00000023225, NM_023168, uc007wjl.1_5end
EntrezGene:Grina
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Grina

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A336.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B95.13
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.14
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.23
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C322.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E316.40
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C89.89
Mouse Microglia, donor2.CNhs12634.11736-123E816.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.36
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D381.49
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F356.31
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D754.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.23
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E455.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E555.15
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.19
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.51
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.54
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B248.31
cerebellum, neonate N30.CNhs11135.1395-42I243.98
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A447.63
corpus striatum, adult.CNhs10487.19-21D821.05
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D531.81
cortex, neonate N30.CNhs11107.1392-42F230.43
diencephalon, adult.CNhs10482.20-12F244.67
diencephalon, neonate N30.CNhs11201.1388-42B231.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G48.84
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A215.78
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G13.24
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E823.97
hippocampus, neonate N00.CNhs11228.627-43G15.97
intestinal mucosa, adult.CNhs10506.860-29I38.59
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G72.81
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I17.09
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H15.92
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C253.14
medulla oblongata, neonate N30.CNhs11200.1396-42A346.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C948.58
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G5236.75
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H358.70
testis, neonate N30.CNhs11130.1391-42E287.56
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.76
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A238.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.23
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A544.57
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A740.53
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.35
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A954.88
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell3.05e-0943
ectodermal cell3.86e-0944
neurectodermal cell3.86e-0944
electrically responsive cell4.68e-0839
electrically active cell4.68e-0839
CNS neuron (sensu Vertebrata)2.87e-0723
neuroblast (sensu Vertebrata)2.87e-0723
neuron5.52e-0733
neuronal stem cell5.52e-0733
neuroblast5.52e-0733
electrically signaling cell5.52e-0733

Uber anatomy
Ontology termp-valuen
central nervous system6.84e-2373
nervous system7.51e-2275
ectoderm-derived structure1.06e-1995
ectoderm1.06e-1995
presumptive ectoderm1.06e-1995
regional part of nervous system6.27e-1954
neural tube1.60e-1752
neural rod1.60e-1752
future spinal cord1.60e-1752
neural keel1.60e-1752
neurectoderm2.65e-1764
neural plate2.65e-1764
presumptive neural plate2.65e-1764
brain7.06e-1547
future brain7.06e-1547
regional part of brain2.10e-1446
ecto-epithelium3.89e-1473
structure with developmental contribution from neural crest1.41e-1392
gray matter9.98e-1334
anterior neural tube3.08e-1140
pre-chordal neural plate3.28e-1149
regional part of forebrain1.16e-1039
forebrain1.16e-1039
future forebrain1.16e-1039
brain grey matter2.25e-1029
regional part of telencephalon2.25e-1029
telencephalon2.25e-1029
anatomical conduit1.00e-09122
tube5.34e-09114
adult organism3.59e-0851
posterior neural tube1.53e-0712
chordal neural plate1.53e-0712
regional part of cerebral cortex1.67e-0717
occipital lobe3.08e-0710
visual cortex3.08e-0710
neocortex3.08e-0710
cerebral cortex9.09e-0721
cerebral hemisphere9.09e-0721
pallium9.09e-0721
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