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FFCP PHASE1:Mm9::chr3:143865543..143865579,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:143865543..143865579,-
|DHSsupport=NA
|short_description=p7@Lmo4
|DPIdataset=NA
|description=CAGE_peak_7_at_Lmo4_5end
|association_with_transcript=-183bp_to_NM_001161769,uc008rpl.2_5end
|EntrezGene=16911
|EntrezGene=16911
|HGNC=
|HGNC=
|MCL_coexpression_id=1914
|TSSclassifier=NA
|UniProt=P61969,Q542S1
|UniProt=P61969,Q542S1
|association_with_transcript=-183bp_to_NM_001161769,uc008rpl.2_5end
|cluster_id=chr3:143865543..143865579,-
|description=CAGE_peak_7_at_Lmo4_5end
|id=chr3:143865543..143865579,-
|ontology_enrichment_celltype=CL:0000221!1.13e-07!44;CL:0000133!1.13e-07!44;CL:0002319!2.85e-07!43
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.50e-17!75;UBERON:0001016!6.50e-17!75;UBERON:0001017!7.49e-17!73;UBERON:0005743!7.49e-17!73;UBERON:0004121!2.04e-16!102;UBERON:0000924!2.04e-16!102;UBERON:0006601!2.04e-16!102;UBERON:0000955!9.76e-13!50;UBERON:0006238!9.76e-13!50;UBERON:0002616!2.48e-12!49;UBERON:0001049!7.86e-12!52;UBERON:0005068!7.86e-12!52;UBERON:0006241!7.86e-12!52;UBERON:0007135!7.86e-12!52;UBERON:0002780!1.54e-11!39;UBERON:0001890!1.54e-11!39;UBERON:0006240!1.54e-11!39;UBERON:0003080!1.67e-11!40;UBERON:0000033!1.82e-11!63;UBERON:0003056!4.35e-11!49;UBERON:0002346!5.44e-11!71;UBERON:0003075!5.44e-11!71;UBERON:0007284!5.44e-11!71;UBERON:0002020!3.02e-10!34;UBERON:0002791!7.59e-10!29;UBERON:0003528!7.59e-10!29;UBERON:0001893!7.59e-10!29;UBERON:0002619!9.01e-09!17;UBERON:0002021!4.25e-08!10;UBERON:0000411!4.25e-08!10;UBERON:0001950!4.25e-08!10;UBERON:0000956!1.28e-07!21;UBERON:0001869!1.28e-07!21;UBERON:0000203!1.28e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.25e-18,10;UBERON:0000411,3.25e-18,10;UBERON:0001950,3.25e-18,10;UBERON:0004121,1.54e-15,95;UBERON:0000924,1.54e-15,95;UBERON:0006601,1.54e-15,95;UBERON:0001017,1.03e-14,73;UBERON:0001016,4.17e-14,75;UBERON:0002780,1.33e-13,39;UBERON:0001890,1.33e-13,39;UBERON:0006240,1.33e-13,39;UBERON:0003080,3.98e-13,40;UBERON:0003528,8.39e-13,29;UBERON:0002791,8.39e-13,29;UBERON:0001893,8.39e-13,29;UBERON:0000073,1.12e-12,54;UBERON:0002616,4.83e-12,46;UBERON:0010371,6.55e-12,73;UBERON:0002619,9.35e-12,17;UBERON:0000955,1.15e-11,47;UBERON:0006238,1.15e-11,47;UBERON:0000956,7.30e-11,21;UBERON:0001869,7.30e-11,21;UBERON:0000203,7.30e-11,21;UBERON:0002020,2.78e-10,34;UBERON:0001049,5.22e-10,52;UBERON:0005068,5.22e-10,52;UBERON:0006241,5.22e-10,52;UBERON:0007135,5.22e-10,52;UBERON:0003056,9.83e-10,49;UBERON:0000014,2.36e-08,5;UBERON:0001003,2.36e-08,5;UBERON:0002097,2.36e-08,5;UBERON:0002199,2.36e-08,5;UBERON:0007029,2.36e-08,5;UBERON:0007376,2.36e-08,5;UBERON:0002416,2.36e-08,5;UBERON:0007383,2.36e-08,5;UBERON:0002346,5.10e-08,64;UBERON:0003075,5.10e-08,64;UBERON:0007284,5.10e-08,64
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.70219357896598,0,0,0,0,0,0,0,0.473193248037357,0.137114433605739,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,20.5080499061085,10.1573594788094,12.5645698553712,28.2351114254887,24.589637458504,20.3914348273085,0,0.202753862439029,0.183546752161682,2.34717403304412,0.65407546914134,0.659058548203415,0.194429899074283,0.839918529752175,0,0.335565212115473,0,0,0.257259436035947,0.573066879877513,3.6097046459421,0.404632921719196,1.05798195854407,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,1.92109152660777,0,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.244981598429908,0.766763768145891,0.919218786610021,1.10115880999389,1.14918604276669,1.22885226604995,0.527545150920775,0.274462930807229,1.56274011167028,0.279182999001381,0.56276261003168,1.22238598221448,0.294628585473668,0.996601765593721,0.372798891650601,0.302904773332736,0.302286240427142,0,0,0,0,0,0,0.702222100658759,0,0,0,1.26759077799012,0,0,0,0,0,0,0.5709193985953,0,0,0.867426633830679,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,5.30766331169925,0,1.32504911076236,0.484875253135222,0,0.292780797011547,0.209446706813455,0.510914110417183,0.359445373517761,0.599902730993408,0.889491589511453,0.299581278809645,5.03250663100489,2.01046963380583,12.5153510538439,15.5986428971502,0.83115217823824,2.75810147215188,0.305518091550949,1.11966273549084,0.758168275301024,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.753524089178575,0.272145996605311,0.12811372028485,0.374806898238915,0.517406741478031,0.431135985865684,0.945530400839096,0.175951124163949,0.657587197282725,0.278047249225598,0,0,0,0,1.28673953557358,0.568326998791185,0,0.469052119962192,0,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,5.67782861123144,0.514523061896422,0,0.264450566663544,0.426576501070468,0.464473343720877,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0.166845105716094,0,0.449724224769707,0,0.241177159752417,0.50925170356284,0.287696137450811,0,0,1.43768206527355,0.744281895337007,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0.469380496577004,0.335012514883631,0.238043640886014,0.585400943573396,0.472905432318573,0.221464689648775,0.478364305972461,0.163863314715738,0.345369963731791,0.578596234326046,1.50791283939272,1.08781136763742,0,0.827810238914197,0,0.117211686592203,0.163934945376675,0,1.89304931649754,0.780877488593277,0.430846795465598,1.19484398976276,0.445597348164788,1.13230612315533,1.21443210502468,0.584511715822624,1.97643888973262,0.963963949265421,0,0.534196811001766,0,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.775284879504663,0,0,0,0,0,0,0.36012218806262,1.03486947026204,0.214337035031592,0.354680467284547,0.891844088010353,1.64549020602121,1.2178597964584,0,0,0.441056796109924,2.30840754118072,1.29171541356724,1.99032652262914,3.34242563208782,1.80554989719567,0,0.556275906031529,0.341741761595705,0.206386867963223,1.11116716421827,0.376736914009382,0.136694227721025,0.228778173206523,0.339956859987711,0.419854356970974,0.276399947608848,0.954670618015114,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0,0.388902376688095,0.774958940866387,0.168956125490778,0,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.772758376128762,0,0.183151624267265,0.214368379079066,0.501572104035363,10.7302850097243,8.74617949363636,10.8850147553485,6.01486138202907,16.4419804744954,9.82012066606611,20.925697507186,11.7083512838297,13.1411298605419,15.5328093525546,0.415149390336707,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.588795680537589,0,0,0.238436189947321,0.145346416632329,0.658765662907314,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.935726433781634,0.429742108096597,0,0.441182838239031,1.39120701372253
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.70219357896598,0,0,0,0,0,0,0,0.473193248037357,0.137114433605739,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,20.5080499061085,10.1573594788094,12.5645698553712,28.2351114254887,24.589637458504,20.3914348273085,0,0.202753862439029,0.183546752161682,2.34717403304412,0.65407546914134,0.659058548203415,0.194429899074283,0.839918529752175,0,0.335565212115473,0,0,0.257259436035947,0.573066879877513,3.6097046459421,0.404632921719196,1.05798195854407,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,1.92109152660777,0,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.244981598429908,0.766763768145891,0.919218786610021,1.10115880999389,1.14918604276669,1.22885226604995,0.527545150920775,0.274462930807229,1.56274011167028,0.279182999001381,0.56276261003168,1.22238598221448,0.294628585473668,0.996601765593721,0.372798891650601,0.302904773332736,0.302286240427142,0,0,0,0,0,0,0.702222100658759,0,0,0,1.26759077799012,0,0,0,0,0,0,0.5709193985953,0,0,0.867426633830679,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,5.30766331169925,0,1.32504911076236,0.484875253135222,0,0.292780797011547,0.209446706813455,0.510914110417183,0.359445373517761,0.599902730993408,0.889491589511453,0.299581278809645,5.03250663100489,2.01046963380583,12.5153510538439,15.5986428971502,0.83115217823824,2.75810147215188,0.305518091550949,1.11966273549084,0.758168275301024,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.753524089178575,0.272145996605311,0.12811372028485,0.374806898238915,0.517406741478031,0.431135985865684,0.945530400839096,0.175951124163949,0.657587197282725,0.278047249225598,0,0,0,0,1.28673953557358,0.568326998791185,0,0.469052119962192,0,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,5.67782861123144,0.514523061896422,0,0.264450566663544,0.426576501070468,0.464473343720877,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0,0,0.166845105716094,0,0.449724224769707,0,0.241177159752417,0.50925170356284,0.287696137450811,0,0,1.43768206527355,0.744281895337007,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0.469380496577004,0.335012514883631,0.238043640886014,0.585400943573396,0.472905432318573,0.221464689648775,0.478364305972461,0.163863314715738,0.345369963731791,0.578596234326046,1.50791283939272,1.08781136763742,0,0.827810238914197,0,0.117211686592203,0.163934945376675,0,1.89304931649754,0.780877488593277,0.430846795465598,1.19484398976276,0.445597348164788,1.13230612315533,1.21443210502468,0.584511715822624,1.97643888973262,0.963963949265421,0,0.534196811001766,0,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.775284879504663,0,0,0,0,0,0,0.36012218806262,1.03486947026204,0.214337035031592,0.354680467284547,0.891844088010353,1.64549020602121,1.2178597964584,0,0,0.441056796109924,2.30840754118072,1.29171541356724,1.99032652262914,3.34242563208782,1.80554989719567,0,0.556275906031529,0.341741761595705,0.206386867963223,1.11116716421827,0.376736914009382,0.136694227721025,0.228778173206523,0.339956859987711,0.419854356970974,0.276399947608848,0.954670618015114,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0,0.388902376688095,0.774958940866387,0.168956125490778,0,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.772758376128762,0,0.183151624267265,0.214368379079066,0.501572104035363,10.7302850097243,8.74617949363636,10.8850147553485,6.01486138202907,16.4419804744954,9.82012066606611,20.925697507186,11.7083512838297,13.1411298605419,15.5328093525546,0.415149390336707,0.399024873401031,0.341467211508268,0.243106717068294,0.628839487883947,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.588795680537589,0,0,0.238436189947321,0.145346416632329,0.658765662907314,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.935726433781634,0.429742108096597,0,0.441182838239031,1.39120701372253
|short_description=p7@Lmo4
}}
}}

Latest revision as of 18:03, 1 October 2015

Short description:p7@Lmo4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Lmo4_5end
Coexpression cluster:MCL_coexpression_mm9:1914
Association with transcript: -183bp_to_NM_001161769, uc008rpl.2_5end
EntrezGene:Lmo4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Lmo4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G820.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G928.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H224.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D512.52
cortex, neonate N30.CNhs11107.1392-42F215.60
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.99
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe3.25e-1810
visual cortex3.25e-1810
neocortex3.25e-1810
ectoderm-derived structure1.54e-1595
ectoderm1.54e-1595
presumptive ectoderm1.54e-1595
central nervous system1.03e-1473
nervous system4.17e-1475
regional part of forebrain1.33e-1339
forebrain1.33e-1339
future forebrain1.33e-1339
anterior neural tube3.98e-1340
brain grey matter8.39e-1329
regional part of telencephalon8.39e-1329
telencephalon8.39e-1329
regional part of nervous system1.12e-1254
regional part of brain4.83e-1246
ecto-epithelium6.55e-1273
regional part of cerebral cortex9.35e-1217
brain1.15e-1147
future brain1.15e-1147
cerebral cortex7.30e-1121
cerebral hemisphere7.30e-1121
pallium7.30e-1121
gray matter2.78e-1034
neural tube5.22e-1052
neural rod5.22e-1052
future spinal cord5.22e-1052
neural keel5.22e-1052
pre-chordal neural plate9.83e-1049
zone of skin2.36e-085
skin epidermis2.36e-085
skin of body2.36e-085
integument2.36e-085
surface2.36e-085
outer epithelium2.36e-085
integumental system2.36e-085
enveloping layer of ectoderm2.36e-085
neurectoderm5.10e-0864
neural plate5.10e-0864
presumptive neural plate5.10e-0864
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