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FFCP PHASE1:Mm9::chr6:124414714..124414777,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:124414714..124414777,-
|DHSsupport=NA
|short_description=p1@Clstn3
|DPIdataset=NA
|description=CAGE_peak_1_at_Clstn3_5end
|association_with_transcript=24bp_to_NM_153508,uc009dqw.2_5end
|EntrezGene=232370
|EntrezGene=232370
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q99JH7
|UniProt=Q99JH7
|association_with_transcript=24bp_to_NM_153508,uc009dqw.2_5end
|cluster_id=chr6:124414714..124414777,-
|description=CAGE_peak_1_at_Clstn3_5end
|id=chr6:124414714..124414777,-
|ontology_enrichment_celltype=CL:0000117!3.53e-13!23;CL:0000337!3.53e-13!23;CL:0000540!1.76e-11!33;CL:0000047!1.76e-11!33;CL:0000031!1.76e-11!33;CL:0000404!1.76e-11!33;CL:0000393!4.66e-07!39;CL:0000211!4.66e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.14e-14,23;CL:0000337,3.14e-14,23;CL:0000540,9.61e-12,33;CL:0000047,9.61e-12,33;CL:0000031,9.61e-12,33;CL:0000404,9.61e-12,33;CL:0000393,8.25e-08,39;CL:0000211,8.25e-08,39;CL:0000221,7.17e-07,44;CL:0000133,7.17e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.53e-27!71;UBERON:0003075!6.53e-27!71;UBERON:0007284!6.53e-27!71;UBERON:0001017!2.74e-23!73;UBERON:0005743!2.74e-23!73;UBERON:0000033!1.17e-22!63;UBERON:0000073!1.70e-22!75;UBERON:0001016!1.70e-22!75;UBERON:0001049!1.96e-22!52;UBERON:0005068!1.96e-22!52;UBERON:0006241!1.96e-22!52;UBERON:0007135!1.96e-22!52;UBERON:0000955!1.49e-21!50;UBERON:0006238!1.49e-21!50;UBERON:0004121!2.10e-21!102;UBERON:0000924!2.10e-21!102;UBERON:0006601!2.10e-21!102;UBERON:0002616!5.48e-21!49;UBERON:0003056!3.37e-20!49;UBERON:0003080!2.06e-18!40;UBERON:0002780!1.03e-17!39;UBERON:0001890!1.03e-17!39;UBERON:0006240!1.03e-17!39;UBERON:0002020!5.59e-16!34;UBERON:0002791!3.54e-13!29;UBERON:0003528!3.54e-13!29;UBERON:0001893!3.54e-13!29;UBERON:0007811!3.83e-10!86;UBERON:0000153!1.04e-09!94;UBERON:0000956!1.05e-08!21;UBERON:0001869!1.05e-08!21;UBERON:0000203!1.05e-08!21;UBERON:0002021!1.81e-07!10;UBERON:0000411!1.81e-07!10;UBERON:0001950!1.81e-07!10;UBERON:0002619!4.23e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.21e-27,64;UBERON:0003075,2.21e-27,64;UBERON:0007284,2.21e-27,64;UBERON:0000073,4.06e-27,54;UBERON:0001017,1.78e-25,73;UBERON:0001049,2.36e-25,52;UBERON:0005068,2.36e-25,52;UBERON:0006241,2.36e-25,52;UBERON:0007135,2.36e-25,52;UBERON:0001016,2.12e-24,75;UBERON:0003056,2.21e-22,49;UBERON:0010371,2.83e-22,73;UBERON:0000955,5.57e-22,47;UBERON:0006238,5.57e-22,47;UBERON:0002616,2.26e-21,46;UBERON:0004121,1.51e-20,95;UBERON:0000924,1.51e-20,95;UBERON:0006601,1.51e-20,95;UBERON:0003080,1.88e-20,40;UBERON:0002780,1.10e-19,39;UBERON:0001890,1.10e-19,39;UBERON:0006240,1.10e-19,39;UBERON:0002020,8.52e-18,34;UBERON:0010314,1.14e-17,92;UBERON:0003528,1.01e-14,29;UBERON:0002791,1.01e-14,29;UBERON:0001893,1.01e-14,29;UBERON:0000956,8.29e-10,21;UBERON:0001869,8.29e-10,21;UBERON:0000203,8.29e-10,21;UBERON:0002619,4.73e-08,17;UBERON:0002021,5.25e-08,10;UBERON:0000411,5.25e-08,10;UBERON:0001950,5.25e-08,10
|phase1_expression=16.0148847104794,0,0,0,0,0.33575854382378,0,0,0.84473233291,3.27690336850791,0,0.0797721589953364,0,0,1.33243904726265,1.41732687172878,2.79824751251259,0,0.137114433605739,0.42438965179803,36.9938312157154,0.0992909512008853,0,0.319984845586813,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.6601913449854,86.7545206006134,35.494558596346,0,0,0,0.988866362566974,0,0.898800331555214,1.92109152660777,12.9612015385597,14.9856591548177,12.6194976810829,148.824162874382,147.098448273775,20.4559634688973,20.4150853268843,13.7882817991503,187.196997698961,198.298436046297,203.528656564523,56.9748762994437,63.5839123036747,51.5704236851192,207.991334256029,185.711661310454,205.51364325981,113.432005407362,130.697202973577,76.6101722341985,0.302904773332736,1.28471652181535,0.869593466105033,0,0,0,0,0,6.31999890592883,0,0,0,9.57735254481427,0,0,0,0.216491041011214,0,0,5.48082622651488,0,9.20341262201914,21.3386951922347,25.879565656532,22.1390877365816,18.6896074285252,9.8774513993992,3.64433114856059,0.247194967734374,0.144599356919912,0.884610551949874,0.808834249737046,1.32504911076236,1.45462575940567,0,158.97997277727,205.257772677186,0.255457055208591,2.51611761462433,1.79970819298022,1.01656181658452,186.938717977219,105.682639251103,53.6544083521931,164.437806901894,190.763731168427,148.360663815526,158.022990227996,2.74966282395854,0.746441823660558,0,6.52369753248069,8.97831056442656,4.13823787980251,5.94205028357652,8.43946979880004,7.68812440410005,10.6334387836425,11.1505052226077,21.9897865128163,2.58681591519411,3.9712276835242,4.39877810409872,2.41115305670332,3.61461423993277,0.696504333044333,1.23469281844766,3.78165106955137,0.702213187313235,0,0,1.03562886267751,0.703578179943289,0.540186184383045,0.710234206755631,0.590292695242212,0.154267112887378,0.232533944750408,0.536546802799238,0.350296027101508,0,0.164167464079095,0,0,0,0,121.337300321501,38.8979434793695,0,0.264450566663544,4.05247676016945,3.94802342162745,1.67527699718721,1.4117846723634,2.2237804384487,1.71203063501303,0,1.15289268306808,1.00534083520108,2.18852119245266,0.974820435595601,0.898819408654221,0.216138049874694,0.796565093017469,1.51734320762465,3.54170389090159,1.1270773567308,1.62921062276251,1.93952487167626,1.96380295692892,0.632365371242573,0.147610147979602,0.31399745568275,0,0.592905254174298,1.33476084572875,3.34150291692445,2.69834534861824,2.63718157805054,4.10001171579109,6.62027214631691,5.4662266115654,1.62135226775035,1.92192989231657,0,0.372140947668503,0,0,0,0,0.369506380333209,2.65287976478679,1.30371981153621,0.678980343100753,0.938760993154008,0.502518772325447,0.476087281772027,0.390267295715598,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,180.940514916242,175.58310651512,0,0,2.2085575359138,3.90438744296638,4.95473814785438,0.477937595905104,1.55959071857676,0.566153061577665,2.02405350837447,5.55286130031493,3.95287777946523,65.2282272336268,15.0456490320765,5.1639025063504,2.60619134965722,0.329940245945071,0,5.09839335925461,8.46505959501303,7.16699303072413,8.26845300066164,4.91896236710284,3.35956781118687,1.45413491791002,2.85197902707777,0.948110273807448,0,0,30.9800041235947,9.36317688962813,16.4285528404098,19.9333442579381,20.3941268688615,29.9659613571479,31.7579609762093,51.7590413494819,0.23467170806371,0,1.10264199027481,0.16488625294148,0,0.0603129249281559,0.358117032009409,0,0.582961673259701,149.452793420471,1.70870880797853,1.65109494370578,5.37064129372164,5.27431679613135,3.00727300986255,2.51655990527175,6.79913719975421,4.61839792668071,4.69879910935041,0.954670618015114,3.16335993581135,3.25311147402958,3.13215488383224,2.09088296014469,3.05707589244649,2.83215127408124,1.07449492442937,0.26175594198403,0.518459893167171,0,0,5.53211220362722,5.62558867554132,11.6670713006429,13.5617814651618,8.27885014904813,4.3422178298929,1.43224823328345,1.78260885523708,3.62376181239009,3.74439008135225,0,0.405450430580328,0.410843828659309,0,0.358053391334963,0,0.240390899039938,0,0.201932899896295,0.228620419965,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,0.453460767230423,0.443971906748129,0,0,0.579568782096571,0,0.36630324853453,0,0.501572104035363,148.529734608288,165.256759906076,169.577071978061,121.672053099331,180.176702699679,166.942051323124,153.905130052852,176.525911663894,180.803821184698,167.236580695838,1.45302286617847,10.3746467084268,10.2440163452481,4.37592090722929,7.75568701723535,6.61836630420051,9.77885602327107,7.41726206060019,12.194929964489,12.1294661646623,9.88569269571935,10.7517014590063,10.3005658216871,9.92389862275474,11.6594001979895,6.66811167796303,9.38663040153329,11.767462448286,12.3625770240992,8.83193520806384,10.2860775715625,9.05126611412621,8.10683045820891,8.1393993314104,11.387235030255,12.6075765758598,10.9756783723664,8.94437018888666,12.222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|phase1_expression=16.0148847104794,0,0,0,0,0.33575854382378,0,0,0.84473233291,3.27690336850791,0,0.0797721589953364,0,0,1.33243904726265,1.41732687172878,2.79824751251259,0,0.137114433605739,0.42438965179803,36.9938312157154,0.0992909512008853,0,0.319984845586813,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.6601913449854,86.7545206006134,35.494558596346,0,0,0,0.988866362566974,0,0.898800331555214,1.92109152660777,12.9612015385597,14.9856591548177,12.6194976810829,148.824162874382,147.098448273775,20.4559634688973,20.4150853268843,13.7882817991503,187.196997698961,198.298436046297,203.528656564523,56.9748762994437,63.5839123036747,51.5704236851192,207.991334256029,185.711661310454,205.51364325981,113.432005407362,130.697202973577,76.6101722341985,0.302904773332736,1.28471652181535,0.869593466105033,0,0,0,0,0,6.31999890592883,0,0,0,9.57735254481427,0,0,0,0.216491041011214,0,0,5.48082622651488,0,9.20341262201914,21.3386951922347,25.879565656532,22.1390877365816,18.6896074285252,9.8774513993992,3.64433114856059,0.247194967734374,0.144599356919912,0.884610551949874,0.808834249737046,1.32504911076236,1.45462575940567,0,158.97997277727,205.257772677186,0.255457055208591,2.51611761462433,1.79970819298022,1.01656181658452,186.938717977219,105.682639251103,53.6544083521931,164.437806901894,190.763731168427,148.360663815526,158.022990227996,2.74966282395854,0.746441823660558,0,6.52369753248069,8.97831056442656,4.13823787980251,5.94205028357652,8.43946979880004,7.68812440410005,10.6334387836425,11.1505052226077,21.9897865128163,2.58681591519411,3.9712276835242,4.39877810409872,2.41115305670332,3.61461423993277,0.696504333044333,1.23469281844766,3.78165106955137,0.702213187313235,0,0,1.03562886267751,0.703578179943289,0.540186184383045,0.710234206755631,0.590292695242212,0.154267112887378,0.232533944750408,0.536546802799238,0.350296027101508,0,0.164167464079095,0,0,0,0,121.337300321501,38.8979434793695,0,0.264450566663544,4.05247676016945,3.94802342162745,1.67527699718721,1.4117846723634,2.2237804384487,1.71203063501303,0,1.15289268306808,1.00534083520108,2.18852119245266,0.974820435595601,0.898819408654221,0.216138049874694,0.796565093017469,1.51734320762465,3.54170389090159,1.1270773567308,1.62921062276251,1.93952487167626,1.96380295692892,0.632365371242573,0.147610147979602,0.31399745568275,0,0.592905254174298,1.33476084572875,3.34150291692445,2.69834534861824,2.63718157805054,4.10001171579109,6.62027214631691,5.4662266115654,1.62135226775035,1.92192989231657,0,0.372140947668503,0,0,0,0,0.369506380333209,2.65287976478679,1.30371981153621,0.678980343100753,0.938760993154008,0.502518772325447,0.476087281772027,0.390267295715598,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,180.940514916242,175.58310651512,0,0,2.2085575359138,3.90438744296638,4.95473814785438,0.477937595905104,1.55959071857676,0.566153061577665,2.02405350837447,5.55286130031493,3.95287777946523,65.2282272336268,15.0456490320765,5.1639025063504,2.60619134965722,0.329940245945071,0,5.09839335925461,8.46505959501303,7.16699303072413,8.26845300066164,4.91896236710284,3.35956781118687,1.45413491791002,2.85197902707777,0.948110273807448,0,0,30.9800041235947,9.36317688962813,16.4285528404098,19.9333442579381,20.3941268688615,29.9659613571479,31.7579609762093,51.7590413494819,0.23467170806371,0,1.10264199027481,0.16488625294148,0,0.0603129249281559,0.358117032009409,0,0.582961673259701,149.452793420471,1.70870880797853,1.65109494370578,5.37064129372164,5.27431679613135,3.00727300986255,2.51655990527175,6.79913719975421,4.61839792668071,4.69879910935041,0.954670618015114,3.16335993581135,3.25311147402958,3.13215488383224,2.09088296014469,3.05707589244649,2.83215127408124,1.07449492442937,0.26175594198403,0.518459893167171,0,0,5.53211220362722,5.62558867554132,11.6670713006429,13.5617814651618,8.27885014904813,4.3422178298929,1.43224823328345,1.78260885523708,3.62376181239009,3.74439008135225,0,0.405450430580328,0.410843828659309,0,0.358053391334963,0,0.240390899039938,0,0.201932899896295,0.228620419965,0.100826185136841,0.0974578807397524,0.192423683280659,0.233753804363138,0.453460767230423,0.443971906748129,0,0,0.579568782096571,0,0.36630324853453,0,0.501572104035363,148.529734608288,165.256759906076,169.577071978061,121.672053099331,180.176702699679,166.942051323124,153.905130052852,176.525911663894,180.803821184698,167.236580695838,1.45302286617847,10.3746467084268,10.2440163452481,4.37592090722929,7.75568701723535,6.61836630420051,9.77885602327107,7.41726206060019,12.194929964489,12.1294661646623,9.88569269571935,10.7517014590063,10.3005658216871,9.92389862275474,11.6594001979895,6.66811167796303,9.38663040153329,11.767462448286,12.3625770240992,8.83193520806384,10.2860775715625,9.05126611412621,8.10683045820891,8.1393993314104,11.387235030255,12.6075765758598,10.9756783723664,8.94437018888666,12.222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|short_description=p1@Clstn3
}}
}}

Latest revision as of 15:45, 26 September 2015

Short description:p1@Clstn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Clstn3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 24bp_to_NM_153508, uc009dqw.2_5end
EntrezGene:Clstn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Clstn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A336.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C357.66
Mouse Granule cells, donor2.CNhs12357.11731-123E386.75
Mouse Granule cells, donor3.CNhs12108.11636-122C735.49
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.96
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1148.82
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5147.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.46
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3187.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3198.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7203.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D456.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F463.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D851.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4207.99
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5185.71
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6205.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6113.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6130.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E176.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D79.20
adrenal gland, embryo E14.CNhs11038.406-44C521.34
adrenal gland, embryo E16.CNhs11004.1254-43D625.88
adrenal gland, embryo E17.CNhs11043.1263-45I122.14
adrenal gland, embryo E18.CNhs11026.1262-18F518.69
adrenal gland, neonate N00.CNhs11191.1311-23C19.88
adrenal gland, neonate N25.CNhs11223.1377-27I33.64
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2158.98
cerebellum, neonate N30.CNhs11135.1395-42I2205.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.52
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A4186.94
corpus striatum, adult.CNhs10487.19-21D8105.68
corpus striatum, neonate N00.CNhs11226.630-43F153.65
cortex, adult.CNhs10473.12-14D5164.44
cortex, neonate N30.CNhs11107.1392-42F2190.76
diencephalon, adult.CNhs10482.20-12F2148.36
diencephalon, neonate N30.CNhs11201.1388-42B2158.02
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C68.98
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C95.94
eyeball, embryo E17.CNhs11023.1261-18D48.44
eyeball, neonate N00.CNhs11207.633-15C67.69
eyeball, neonate N01.CNhs11140.1532-43E710.63
eyeball, neonate N02.CNhs11205.1551-44G811.15
eyeball, neonate N16.CNhs11188.777-19A221.99
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8121.34
hippocampus, neonate N00.CNhs11228.627-43G138.90
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A36.62
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2180.94
medulla oblongata, neonate N30.CNhs11200.1396-42A3175.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I965.23
ovary, adult.CNhs10507.91-2I715.05
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E57.17
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G830.98
pituitary gland, embryo E12.CNhs11018.346-16E69.36
pituitary gland, embryo E13.CNhs11009.370-44C716.43
pituitary gland, embryo E14.CNhs11037.398-44A519.93
pituitary gland, embryo E15.CNhs10592.427-16B920.39
pituitary gland, embryo E16.CNhs11036.449-43F629.97
pituitary gland, embryo E17.CNhs11039.1265-44F531.76
pituitary gland, neonate N00.CNhs11190.1308-22E951.76
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C9149.45
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.70
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.53
testis, embryo E15.CNhs11034.443-27C55.63
testis, embryo E16.CNhs11033.470-26G511.67
testis, embryo E17.CNhs11029.486-18I513.56
testis, embryo E18.CNhs11027.503-18G58.28
testis, neonate N00.CNhs11189.1300-22B74.34
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1148.53
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2165.26
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3169.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7121.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4180.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5166.94
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6153.91
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7176.53
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8180.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9167.24
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H210.24
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B17.76
whole body, embryo E16.CNhs10514.453-14F26.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.13
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.52
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I524.48
whole body, embryo E18.CNhs10516.493-3B310.29
whole body, neonate N00.CNhs10525.657-19C210.96
whole body, neonate N01.CNhs10576.659-23C66.12
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm2.21e-2764
neural plate2.21e-2764
presumptive neural plate2.21e-2764
regional part of nervous system4.06e-2754
central nervous system1.78e-2573
neural tube2.36e-2552
neural rod2.36e-2552
future spinal cord2.36e-2552
neural keel2.36e-2552
nervous system2.12e-2475
pre-chordal neural plate2.21e-2249
ecto-epithelium2.83e-2273
brain5.57e-2247
future brain5.57e-2247
regional part of brain2.26e-2146
ectoderm-derived structure1.51e-2095
ectoderm1.51e-2095
presumptive ectoderm1.51e-2095
anterior neural tube1.88e-2040
regional part of forebrain1.10e-1939
forebrain1.10e-1939
future forebrain1.10e-1939
gray matter8.52e-1834
structure with developmental contribution from neural crest1.14e-1792
brain grey matter1.01e-1429
regional part of telencephalon1.01e-1429
telencephalon1.01e-1429
cerebral cortex8.29e-1021
cerebral hemisphere8.29e-1021
pallium8.29e-1021
regional part of cerebral cortex4.73e-0817
occipital lobe5.25e-0810
visual cortex5.25e-0810
neocortex5.25e-0810
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