Personal tools

FFCP PHASE1:Mm9::chr10:74674792..74674803,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74392
|EntrezGene=74392
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q2KN98,Q6GQV8,Q8C9Q9
|UniProt=Q2KN98,Q6GQV8,Q8C9Q9
|association_with_transcript=-14bp_to_ENSMUST00000105421,NM_153406,uc007fqd.1,uc007fqe.2_5end
|association_with_transcript=-14bp_to_ENSMUST00000105421,NM_153406,uc007fqd.1,uc007fqe.2_5end
|cluster_id=chr10:74674792..74674803,+
|description=CAGE_peak_4_at_Specc1l_5end
|description=CAGE_peak_4_at_Specc1l_5end
|id=chr10:74674792..74674803,+
|id=chr10:74674792..74674803,+
|ontology_enrichment_celltype=CL:0000117!3.68e-15!23;CL:0000337!3.68e-15!23;CL:0000540!3.18e-14!33;CL:0000047!3.18e-14!33;CL:0000031!3.18e-14!33;CL:0000404!3.18e-14!33;CL:0000393!1.58e-12!39;CL:0000211!1.58e-12!39;CL:0000221!5.02e-12!44;CL:0000133!5.02e-12!44;CL:0002319!1.74e-11!43;CL:0000055!9.13e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000117,5.16e-33,23;CL:0000337,5.16e-33,23;CL:0000540,2.62e-25,33;CL:0000047,2.62e-25,33;CL:0000031,2.62e-25,33;CL:0000404,2.62e-25,33;CL:0000393,2.91e-20,39;CL:0000211,2.91e-20,39;CL:0000221,7.53e-19,44;CL:0000133,7.53e-19,44;CL:0002319,1.08e-17,43;CL:0002609,4.46e-11,6;CL:0002321,3.22e-10,70;CL:0000723,8.04e-10,91;CL:0000048,8.04e-10,91;CL:0000034,1.06e-08,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.56e-10!75;UBERON:0001016!1.56e-10!75;UBERON:0001017!3.31e-10!73;UBERON:0005743!3.31e-10!73;UBERON:0004121!1.16e-08!102;UBERON:0000924!1.16e-08!102;UBERON:0006601!1.16e-08!102;UBERON:0000033!2.21e-08!63;UBERON:0007811!6.62e-08!86;UBERON:0002346!4.95e-07!71;UBERON:0003075!4.95e-07!71;UBERON:0007284!4.95e-07!71;UBERON:0001049!6.18e-07!52;UBERON:0005068!6.18e-07!52;UBERON:0006241!6.18e-07!52;UBERON:0007135!6.18e-07!52;UBERON:0003056!6.53e-07!49;UBERON:0000955!7.27e-07!50;UBERON:0006238!7.27e-07!50;UBERON:0000153!8.01e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.08e-12,95;UBERON:0000924,2.08e-12,95;UBERON:0006601,2.08e-12,95;UBERON:0001017,4.42e-12,73;UBERON:0000073,5.56e-12,54;UBERON:0002346,1.38e-11,64;UBERON:0003075,1.38e-11,64;UBERON:0007284,1.38e-11,64;UBERON:0001016,1.53e-11,75;UBERON:0002020,4.47e-11,34;UBERON:0002420,2.82e-10,8;UBERON:0007245,2.82e-10,8;UBERON:0010009,2.82e-10,8;UBERON:0010011,2.82e-10,8;UBERON:0000454,2.82e-10,8;UBERON:0010371,2.94e-10,73;UBERON:0010314,2.00e-09,92;UBERON:0003056,2.15e-09,49;UBERON:0001049,5.59e-09,52;UBERON:0005068,5.59e-09,52;UBERON:0006241,5.59e-09,52;UBERON:0007135,5.59e-09,52;UBERON:0003528,1.28e-07,29;UBERON:0002791,1.28e-07,29;UBERON:0001893,1.28e-07,29;UBERON:0002780,2.12e-07,39;UBERON:0001890,2.12e-07,39;UBERON:0006240,2.12e-07,39;UBERON:0003080,4.12e-07,40
|phase1_expression=0.960893082628764,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0.233612640595526,0.645616617207881,0.281577444303333,0.70219357896598,0.513653904676515,0.558405112967355,0.171200729931206,0.611942816932982,0,0.202475267389826,0.699561878128147,1.26184866143295,0.822686601634433,0.84877930359606,0.680346321208558,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,1.23012957516914,0,0,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0.251793635951155,0.709638518536602,0.367093504323363,0,0.436050312760893,0.659058548203415,0.388859798148567,0.55994568650145,0,1.00669563634642,1.45072428402269,1.68046899571232,0.514518872071894,0.286533439938757,0.515672092277442,1.82084814773638,1.5869729378161,4.43681982454325,0.338844532069132,0,0,0,1.4209602298922,0.599200221036809,0.384218305321555,2.69592992002042,2.16009501330705,2.52389953621658,2.28520787523043,0.662605622854841,2.20483438586917,4.79227355091182,3.67687514644008,3.30347642998166,2.042997409363,1.68967186581868,1.84640802822271,3.47653045689157,2.6045668527838,2.23346399201105,1.68828783009504,2.13917546887534,2.35702868378934,1.28134512719193,2.05039390407831,0.832988126665025,0.604572480854284,0.289864488701678,0,0,0,0,0,0.842666520790511,0.511290967734173,0.519572009205738,0,1.83096445709685,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0.258937883647172,0.445326417194474,0.173485326766136,0,0.230615497256059,0.150722640552623,0.587943535678524,0.502666365318702,0,0.144599356919912,0.884610551949874,0.485300549842228,0,0.969750506270444,0,0.585561594023094,1.04723353406728,0,0.958520996047362,1.79970819298022,0.635351135365324,0.449371918214468,0,2.26177833803156,0.869121600961382,0,0.62336413367868,0.648965052271031,0.407357455401265,0.497627882440372,0.252722758433675,0,1.04096354370163,0.689706313300419,0.540186389416048,1.35634336052144,1.36072998302656,1.40925092313335,1.12442069471675,0.258703370739016,0.431135985865684,0.567318240503458,0,0.219195732427575,0.834141747676794,0,0.411564272815887,0.59710280045548,0,0,0.852490498186778,1.03562886267751,0.234526059981096,0.720248245844059,0.23674473558521,1.18058539048442,0.925602677324269,0.930135779001631,1.07309360559848,0.350296027101508,0.822799249567402,0.656669856316381,1.21603214318784,0.730999937126662,0.219550115291051,0.134206418760372,0.420579897128254,0.92614151141356,0,0,0.426576501070468,0.232236671860439,0.644337306610467,0.201683524623343,0.444756087689741,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0.799739588268102,0,0.610953983535943,0.775809948670503,0.631222379012867,0.379419222745544,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0.589676985339609,0,0.202860121388503,0.482354319504834,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.757965647081939,0.977789858652155,0.339490171550376,0.938760993154008,0.167506257441816,0,0.390267295715598,0.630540576424764,0.664394068946325,0.637819074629948,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0,0.481651769963376,0.35163505977661,0.491804836130026,1.00988370881749,1.57754109708128,0.390438744296638,0.646270193198397,0.955875191810208,0.222798674082394,0,0.809621403349789,0.584511715822624,1.97643888973262,0.963963949265421,0.425820255624806,0.35613120733451,0.977321756121456,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0.922305443831782,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0.680879211507576,0.900305470156551,0.646793418913773,1.07168517515796,0.177340233642274,0.356737635204141,1.31639216481697,1.2178597964584,0,0.63549621259146,0.220528398054962,0,0.322928853391811,0.784068024066026,0.477489376012546,0.164140899745061,0.291480836629851,0.370850604021019,0.512612642393558,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0.679913719975421,0.839708713941948,0.552799895217695,0,0.316335993581135,0.406638934253697,0.648032044930808,0,0.655087691238533,0.539457385539283,0.165306911450672,0.26175594198403,0,0,0,1.49516546043979,0.330916980914195,1.16670713006429,1.16243841129958,0.675824501963113,0.704143431874524,0.911430693907651,0.524296722128554,1.44950472495604,2.01621004380506,0.948033361884535,0.405450430580328,0.308132871494482,0.25984164595559,0,0.39736270956253,0.961563596159751,0.295379054349154,0.504832249740738,0.762068066549998,0.806609481094724,0.487289403698762,0.962118416403295,1.28564592399726,0.680191150845634,0.221985953374065,0.0897138566094757,0.503653849092235,0.579568782096571,0.187682475451182,0.73260649706906,0,0,0,0.460325236507177,0,0.68741272937475,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0.93408612825759,1.59609949360412,0.682934423016537,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0,0,0.50695859978048,0.565879024158229,1.21733959710847,0.704276676453562,0.918967503289812,1.42888107384922,1.15884325944855,0.192909220463705,0.412085900803307,1.03039244094078,0.342869252385415,0.532427418478012,0.953744759789284,0.726732083161643,0.188218760830661,0.592302255241736,0.365855945745545,0,0.407412341537585,0.561142271657738,0.830445126869219,0.788035859004508,1.22769312950907,1.08455788830176,0.771626443924566,0.499621155875892,0.233931608445408,0,0.57386499620653,0.661774257358546,0.463735671240843
|phase1_expression=0.960893082628764,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0.233612640595526,0.645616617207881,0.281577444303333,0.70219357896598,0.513653904676515,0.558405112967355,0.171200729931206,0.611942816932982,0,0.202475267389826,0.699561878128147,1.26184866143295,0.822686601634433,0.84877930359606,0.680346321208558,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0,1.23012957516914,0,0,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0.251793635951155,0.709638518536602,0.367093504323363,0,0.436050312760893,0.659058548203415,0.388859798148567,0.55994568650145,0,1.00669563634642,1.45072428402269,1.68046899571232,0.514518872071894,0.286533439938757,0.515672092277442,1.82084814773638,1.5869729378161,4.43681982454325,0.338844532069132,0,0,0,1.4209602298922,0.599200221036809,0.384218305321555,2.69592992002042,2.16009501330705,2.52389953621658,2.28520787523043,0.662605622854841,2.20483438586917,4.79227355091182,3.67687514644008,3.30347642998166,2.042997409363,1.68967186581868,1.84640802822271,3.47653045689157,2.6045668527838,2.23346399201105,1.68828783009504,2.13917546887534,2.35702868378934,1.28134512719193,2.05039390407831,0.832988126665025,0.604572480854284,0.289864488701678,0,0,0,0,0,0.842666520790511,0.511290967734173,0.519572009205738,0,1.83096445709685,0,2.54805239706646,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0.258937883647172,0.445326417194474,0.173485326766136,0,0.230615497256059,0.150722640552623,0.587943535678524,0.502666365318702,0,0.144599356919912,0.884610551949874,0.485300549842228,0,0.969750506270444,0,0.585561594023094,1.04723353406728,0,0.958520996047362,1.79970819298022,0.635351135365324,0.449371918214468,0,2.26177833803156,0.869121600961382,0,0.62336413367868,0.648965052271031,0.407357455401265,0.497627882440372,0.252722758433675,0,1.04096354370163,0.689706313300419,0.540186389416048,1.35634336052144,1.36072998302656,1.40925092313335,1.12442069471675,0.258703370739016,0.431135985865684,0.567318240503458,0,0.219195732427575,0.834141747676794,0,0.411564272815887,0.59710280045548,0,0,0.852490498186778,1.03562886267751,0.234526059981096,0.720248245844059,0.23674473558521,1.18058539048442,0.925602677324269,0.930135779001631,1.07309360559848,0.350296027101508,0.822799249567402,0.656669856316381,1.21603214318784,0.730999937126662,0.219550115291051,0.134206418760372,0.420579897128254,0.92614151141356,0,0,0.426576501070468,0.232236671860439,0.644337306610467,0.201683524623343,0.444756087689741,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0.799739588268102,0,0.610953983535943,0.775809948670503,0.631222379012867,0.379419222745544,0.147610147979602,0.31399745568275,0,0,0.166845105716094,0.589676985339609,0,0.202860121388503,0.482354319504834,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.757965647081939,0.977789858652155,0.339490171550376,0.938760993154008,0.167506257441816,0,0.390267295715598,0.630540576424764,0.664394068946325,0.637819074629948,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0,0.481651769963376,0.35163505977661,0.491804836130026,1.00988370881749,1.57754109708128,0.390438744296638,0.646270193198397,0.955875191810208,0.222798674082394,0,0.809621403349789,0.584511715822624,1.97643888973262,0.963963949265421,0.425820255624806,0.35613120733451,0.977321756121456,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0.922305443831782,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0.680879211507576,0.900305470156551,0.646793418913773,1.07168517515796,0.177340233642274,0.356737635204141,1.31639216481697,1.2178597964584,0,0.63549621259146,0.220528398054962,0,0.322928853391811,0.784068024066026,0.477489376012546,0.164140899745061,0.291480836629851,0.370850604021019,0.512612642393558,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0.679913719975421,0.839708713941948,0.552799895217695,0,0.316335993581135,0.406638934253697,0.648032044930808,0,0.655087691238533,0.539457385539283,0.165306911450672,0.26175594198403,0,0,0,1.49516546043979,0.330916980914195,1.16670713006429,1.16243841129958,0.675824501963113,0.704143431874524,0.911430693907651,0.524296722128554,1.44950472495604,2.01621004380506,0.948033361884535,0.405450430580328,0.308132871494482,0.25984164595559,0,0.39736270956253,0.961563596159751,0.295379054349154,0.504832249740738,0.762068066549998,0.806609481094724,0.487289403698762,0.962118416403295,1.28564592399726,0.680191150845634,0.221985953374065,0.0897138566094757,0.503653849092235,0.579568782096571,0.187682475451182,0.73260649706906,0,0,0,0.460325236507177,0,0.68741272937475,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0.93408612825759,1.59609949360412,0.682934423016537,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0,0,0.50695859978048,0.565879024158229,1.21733959710847,0.704276676453562,0.918967503289812,1.42888107384922,1.15884325944855,0.192909220463705,0.412085900803307,1.03039244094078,0.342869252385415,0.532427418478012,0.953744759789284,0.726732083161643,0.188218760830661,0.592302255241736,0.365855945745545,0,0.407412341537585,0.561142271657738,0.830445126869219,0.788035859004508,1.22769312950907,1.08455788830176,0.771626443924566,0.499621155875892,0.233931608445408,0,0.57386499620653,0.661774257358546,0.463735671240843
|short_description=p4@Specc1l
|short_description=p4@Specc1l
}}
}}

Latest revision as of 06:50, 26 September 2015

Short description:p4@Specc1l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Specc1l_5end
Coexpression cluster:NA
Association with transcript: -14bp_to_ENSMUST00000105421, NM_153406, uc007fqd.1, uc007fqe.2_5end
EntrezGene:Specc1l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Specc1l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.08e-1295
ectoderm2.08e-1295
presumptive ectoderm2.08e-1295
central nervous system4.42e-1273
regional part of nervous system5.56e-1254
neurectoderm1.38e-1164
neural plate1.38e-1164
presumptive neural plate1.38e-1164
nervous system1.53e-1175
gray matter4.47e-1134
basal ganglion2.82e-108
nuclear complex of neuraxis2.82e-108
aggregate regional part of brain2.82e-108
collection of basal ganglia2.82e-108
cerebral subcortex2.82e-108
ecto-epithelium2.94e-1073
structure with developmental contribution from neural crest2.00e-0992
pre-chordal neural plate2.15e-0949
neural tube5.59e-0952
neural rod5.59e-0952
future spinal cord5.59e-0952
neural keel5.59e-0952
brain grey matter1.28e-0729
regional part of telencephalon1.28e-0729
telencephalon1.28e-0729
regional part of forebrain2.12e-0739
forebrain2.12e-0739
future forebrain2.12e-0739
anterior neural tube4.12e-0740
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:74674792..74674803,%2B&oldid=4239168"