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FFCP PHASE1:Mm9::chr13:81772118..81772152,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=110789
|EntrezGene=110789
|HGNC=
|HGNC=
|MCL_coexpression_id=53
|TSSclassifier=NA
|UniProt=B8JJE0,D3YYF1,Q8VHN7,Q8BPQ5
|UniProt=B8JJE0,D3YYF1,Q8VHN7,Q8BPQ5
|association_with_transcript=0bp_to_ENSMUST00000095585,ENSMUST00000126444,ENSMUST00000128585,ENSMUST00000146749,NM_054053,uc007rhn.1,uc007rhs.1,uc007rht.1,uc007rhu.1_5end
|association_with_transcript=0bp_to_ENSMUST00000095585,ENSMUST00000126444,ENSMUST00000128585,ENSMUST00000146749,NM_054053,uc007rhn.1,uc007rhs.1,uc007rht.1,uc007rhu.1_5end
|cluster_id=chr13:81772118..81772152,-
|description=CAGE_peak_1_at_Gpr98_5end
|description=CAGE_peak_1_at_Gpr98_5end
|id=chr13:81772118..81772152,-
|id=chr13:81772118..81772152,-
|ontology_enrichment_celltype=CL:0000117!2.64e-12!23;CL:0000337!2.64e-12!23;CL:0000221!6.61e-10!44;CL:0000133!6.61e-10!44;CL:0002319!2.37e-09!43;CL:0000540!4.36e-08!33;CL:0000047!4.36e-08!33;CL:0000031!4.36e-08!33;CL:0000404!4.36e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-13,23;CL:0000337,1.25e-13,23;CL:0000221,1.02e-12,44;CL:0000133,1.02e-12,44;CL:0002319,6.77e-12,43;CL:0000540,5.60e-09,33;CL:0000047,5.60e-09,33;CL:0000031,5.60e-09,33;CL:0000404,5.60e-09,33;CL:0002609,1.76e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.04e-15!71;UBERON:0003075!1.04e-15!71;UBERON:0007284!1.04e-15!71;UBERON:0000033!9.31e-15!63;UBERON:0003056!4.88e-14!49;UBERON:0004121!6.36e-13!102;UBERON:0000924!6.36e-13!102;UBERON:0006601!6.36e-13!102;UBERON:0001017!4.06e-12!73;UBERON:0005743!4.06e-12!73;UBERON:0000073!3.27e-11!75;UBERON:0001016!3.27e-11!75;UBERON:0001049!3.84e-11!52;UBERON:0005068!3.84e-11!52;UBERON:0006241!3.84e-11!52;UBERON:0007135!3.84e-11!52;UBERON:0002616!1.67e-09!49;UBERON:0000955!5.18e-09!50;UBERON:0006238!5.18e-09!50;UBERON:0000020!1.83e-08!12;UBERON:0001032!1.83e-08!12;UBERON:0004456!1.83e-08!12;UBERON:0000970!2.04e-08!9;UBERON:0000019!2.04e-08!9;UBERON:0000047!2.04e-08!9;UBERON:0004088!2.04e-08!9;UBERON:0002104!2.04e-08!9;UBERON:0001456!2.04e-08!9;UBERON:0003072!2.04e-08!9;UBERON:0003071!2.04e-08!9;UBERON:0004128!2.04e-08!9;UBERON:0003080!3.06e-08!40;UBERON:0002780!5.32e-08!39;UBERON:0001890!5.32e-08!39;UBERON:0006240!5.32e-08!39;UBERON:0005085!2.34e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.52e-20,49;UBERON:0002346,1.56e-19,64;UBERON:0003075,1.56e-19,64;UBERON:0007284,1.56e-19,64;UBERON:0010371,4.71e-18,73;UBERON:0004121,6.72e-18,95;UBERON:0000924,6.72e-18,95;UBERON:0006601,6.72e-18,95;UBERON:0001017,1.45e-13,73;UBERON:0000020,4.95e-13,12;UBERON:0001032,4.95e-13,12;UBERON:0004456,4.95e-13,12;UBERON:0001016,6.96e-13,75;UBERON:0000073,1.84e-12,54;UBERON:0001049,1.87e-12,52;UBERON:0005068,1.87e-12,52;UBERON:0006241,1.87e-12,52;UBERON:0007135,1.87e-12,52;UBERON:0000970,2.14e-12,9;UBERON:0000019,2.14e-12,9;UBERON:0000047,2.14e-12,9;UBERON:0010312,2.14e-12,9;UBERON:0004088,2.14e-12,9;UBERON:0002104,2.14e-12,9;UBERON:0001456,2.14e-12,9;UBERON:0003072,2.14e-12,9;UBERON:0004128,2.14e-12,9;UBERON:0003071,2.14e-12,9;UBERON:0010314,2.62e-12,92;UBERON:0000033,9.84e-12,13;UBERON:0005085,9.84e-12,13;UBERON:0002780,1.45e-11,39;UBERON:0001890,1.45e-11,39;UBERON:0006240,1.45e-11,39;UBERON:0003080,4.37e-11,40;UBERON:0002616,1.45e-10,46;UBERON:0000955,3.60e-10,47;UBERON:0006238,3.60e-10,47;UBERON:0001444,1.33e-09,11;UBERON:0002020,3.84e-09,34;UBERON:0001954,2.97e-07,7;UBERON:0003022,2.97e-07,7;UBERON:0002421,2.97e-07,7;UBERON:0000349,2.97e-07,7;UBERON:0002600,2.97e-07,7;UBERON:0003528,6.02e-07,29;UBERON:0002791,6.02e-07,29;UBERON:0001893,6.02e-07,29;UBERON:0000007,7.71e-07,8;UBERON:0003296,7.71e-07,8;UBERON:0010133,7.71e-07,8
|phase1_expression=16.4953312517938,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,3.48840250208714,1.31811709640683,2.72201858703997,1.39986421625363,7.18762821824858,0,0,0,0,0,0,7.08107613008592,2.11596391708813,5.70448263155561,0.338844532069132,0.889294796111139,0,0,0,1.19840044207362,2.68952813725088,10.5763404554647,5.40023753326763,7.15104868594699,0.856952953211411,1.98781686856452,11.2691535277758,11.2139201091337,5.51531271966013,1.10115880999389,0.766124028511126,0.614426133024974,9.75958529203434,9.97215315266265,17.1901412283731,0.837548997004143,1.12552522006336,1.22238598221448,2.35702868378934,3.55929201997757,7.45597783301202,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,9.71819596459095,0,0,0,0,0.253359865475099,0,0,0,1.33597925158342,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.879666139307728,0,0,0,0.161766849947409,0,0,0,0.585561594023094,1.46612694769419,0,0,0,0,0.898743836428936,0,3.39266750704734,0.347648640384553,0.511430914660661,0.20778804455956,1.1356888414743,0.407357455401265,0,0,22.5172785798527,16.3951758133007,19.5416788768452,27.9096301198291,38.8818430016145,60.9607032395898,55.9856957644794,47.5067743517825,29.2334808935088,0,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,0.205782136407943,0.995171334092466,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,1.05144974282064,12.4514580978934,0,0,0,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.758671603812327,1.71372768914593,0,0.610953983535943,1.74557238450863,0.631222379012867,1.26473074248515,0.442830443938806,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.505157755894224,0,0,0.739012760666419,1.89491411770485,0.488894929326078,0.678980343100753,0.469380496577004,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0.81931657357869,0,0.578596234326046,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.315508219416257,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,5.67760340833074,0.178065603667255,0.81443479676788,0,0,0.242780636154981,0.906970670894253,0.377210159511796,0,0.922305443831782,0.516856586336442,1.09060118843252,0.356497378384721,0,0,0,0.680879211507576,17.8260483090997,7.50280365939976,7.93047029616891,7.44828981297549,5.88617098086833,6.41741180348272,1.522324745573,0.469343416127421,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.324016022465404,0,0.218362563746178,0.134864346384821,0,0,0,0,0.56369293868419,0.448549638131936,0.496375471371293,1.16670713006429,0.516639293910924,0.675824501963113,0.117357238645754,0.5208175393758,2.30690557736564,0.724752362478018,0.576060012515731,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,1.14579102687879,0.171853182343688,0,0,0,0,0,0,6.53860289780313,10.3746467084268,8.19521307619844,1.70174701947806,1.25767897576789,0.183843508450014,0.888986911206461,0.824140228955577,1.28367683836726,1.76888048234658,1.52087579934144,1.50901073108861,1.40462261204824,1.47257850531199,1.7230640686684,1.42888107384922,2.20180219295225,1.54327376370964,0.824171801606613,1.61918812147837,1.02860775715625,2.30718548007139,2.38436189947321,1.74415699958794,1.78807822789128,1.77690676572521,2.0122077016005,0.526139422875686,1.35804113845862,1.12228454331548,1.18635018124174,1.18205378850676,0.818462086339379,1.23949472948773,1.73615949883027,2.99772693525535,0.935726433781634,0.429742108096597,0.765153328275374,0,0
|phase1_expression=16.4953312517938,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,3.48840250208714,1.31811709640683,2.72201858703997,1.39986421625363,7.18762821824858,0,0,0,0,0,0,7.08107613008592,2.11596391708813,5.70448263155561,0.338844532069132,0.889294796111139,0,0,0,1.19840044207362,2.68952813725088,10.5763404554647,5.40023753326763,7.15104868594699,0.856952953211411,1.98781686856452,11.2691535277758,11.2139201091337,5.51531271966013,1.10115880999389,0.766124028511126,0.614426133024974,9.75958529203434,9.97215315266265,17.1901412283731,0.837548997004143,1.12552522006336,1.22238598221448,2.35702868378934,3.55929201997757,7.45597783301202,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,9.71819596459095,0,0,0,0,0.253359865475099,0,0,0,1.33597925158342,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.879666139307728,0,0,0,0.161766849947409,0,0,0,0.585561594023094,1.46612694769419,0,0,0,0,0.898743836428936,0,3.39266750704734,0.347648640384553,0.511430914660661,0.20778804455956,1.1356888414743,0.407357455401265,0,0,22.5172785798527,16.3951758133007,19.5416788768452,27.9096301198291,38.8818430016145,60.9607032395898,55.9856957644794,47.5067743517825,29.2334808935088,0,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,0.205782136407943,0.995171334092466,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,1.05144974282064,12.4514580978934,0,0,0,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.758671603812327,1.71372768914593,0,0.610953983535943,1.74557238450863,0.631222379012867,1.26473074248515,0.442830443938806,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.505157755894224,0,0,0.739012760666419,1.89491411770485,0.488894929326078,0.678980343100753,0.469380496577004,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0.81931657357869,0,0.578596234326046,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.315508219416257,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,5.67760340833074,0.178065603667255,0.81443479676788,0,0,0.242780636154981,0.906970670894253,0.377210159511796,0,0.922305443831782,0.516856586336442,1.09060118843252,0.356497378384721,0,0,0,0.680879211507576,17.8260483090997,7.50280365939976,7.93047029616891,7.44828981297549,5.88617098086833,6.41741180348272,1.522324745573,0.469343416127421,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.324016022465404,0,0.218362563746178,0.134864346384821,0,0,0,0,0.56369293868419,0.448549638131936,0.496375471371293,1.16670713006429,0.516639293910924,0.675824501963113,0.117357238645754,0.5208175393758,2.30690557736564,0.724752362478018,0.576060012515731,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,1.14579102687879,0.171853182343688,0,0,0,0,0,0,6.53860289780313,10.3746467084268,8.19521307619844,1.70174701947806,1.25767897576789,0.183843508450014,0.888986911206461,0.824140228955577,1.28367683836726,1.76888048234658,1.52087579934144,1.50901073108861,1.40462261204824,1.47257850531199,1.7230640686684,1.42888107384922,2.20180219295225,1.54327376370964,0.824171801606613,1.61918812147837,1.02860775715625,2.30718548007139,2.38436189947321,1.74415699958794,1.78807822789128,1.77690676572521,2.0122077016005,0.526139422875686,1.35804113845862,1.12228454331548,1.18635018124174,1.18205378850676,0.818462086339379,1.23949472948773,1.73615949883027,2.99772693525535,0.935726433781634,0.429742108096597,0.765153328275374,0,0
|short_description=p1@Gpr98
|short_description=p1@Gpr98
}}
}}

Latest revision as of 23:17, 1 October 2015

Short description:p1@Gpr98
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gpr98_5end
Coexpression cluster:MCL_coexpression_mm9:53
Association with transcript: 0bp_to_ENSMUST00000095585, ENSMUST00000126444, ENSMUST00000128585, ENSMUST00000146749, NM_054053, uc007rhn.1, uc007rhs.1, uc007rht.1, uc007rhu.1_5end
EntrezGene:Gpr98
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gpr98

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.58
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.21
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G422.52
eyeball, embryo E12.CNhs11016.345-16C616.40
eyeball, embryo E14.CNhs10521.399-16E219.54
eyeball, embryo E15.CNhs10593.426-16C927.91
eyeball, embryo E17.CNhs11023.1261-18D438.88
eyeball, neonate N00.CNhs11207.633-15C660.96
eyeball, neonate N01.CNhs11140.1532-43E755.99
eyeball, neonate N02.CNhs11205.1551-44G847.51
eyeball, neonate N16.CNhs11188.777-19A229.23
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G112.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I75.68
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E617.83
pituitary gland, embryo E13.CNhs11009.370-44C77.50
pituitary gland, embryo E14.CNhs11037.398-44A57.93
pituitary gland, embryo E15.CNhs10592.427-16B97.45
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F56.42
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I86.54
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.25e-1323
neuroblast (sensu Vertebrata)1.25e-1323
ectodermal cell1.02e-1244
neurectodermal cell1.02e-1244
neural cell6.77e-1243
neuron5.60e-0933
neuronal stem cell5.60e-0933
neuroblast5.60e-0933
electrically signaling cell5.60e-0933
neuron of cerebral cortex1.76e-076

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate5.52e-2049
neurectoderm1.56e-1964
neural plate1.56e-1964
presumptive neural plate1.56e-1964
ecto-epithelium4.71e-1873
ectoderm-derived structure6.72e-1895
ectoderm6.72e-1895
presumptive ectoderm6.72e-1895
central nervous system1.45e-1373
sense organ4.95e-1312
sensory system4.95e-1312
entire sense organ system4.95e-1312
nervous system6.96e-1375
regional part of nervous system1.84e-1254
neural tube1.87e-1252
neural rod1.87e-1252
future spinal cord1.87e-1252
neural keel1.87e-1252
eye2.14e-129
camera-type eye2.14e-129
simple eye2.14e-129
immature eye2.14e-129
ocular region2.14e-129
visual system2.14e-129
face2.14e-129
optic cup2.14e-129
optic vesicle2.14e-129
eye primordium2.14e-129
structure with developmental contribution from neural crest2.62e-1292
head9.84e-1213
ectodermal placode9.84e-1213
regional part of forebrain1.45e-1139
forebrain1.45e-1139
future forebrain1.45e-1139
anterior neural tube4.37e-1140
regional part of brain1.45e-1046
brain3.60e-1047
future brain3.60e-1047
subdivision of head1.33e-0911
gray matter3.84e-0934
Ammon's horn2.97e-077
lobe parts of cerebral cortex2.97e-077
hippocampal formation2.97e-077
limbic system2.97e-077
limbic lobe2.97e-077
brain grey matter6.02e-0729
regional part of telencephalon6.02e-0729
telencephalon6.02e-0729
pituitary gland7.71e-078
gland of diencephalon7.71e-078
neuroendocrine gland7.71e-078
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