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FFCP PHASE1:Mm9::chr16:91011661..91011676,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=104015
|EntrezGene=104015
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=D3Z656
|UniProt=D3Z656
|association_with_transcript=-108bp_to_ENSMUST00000121759,NM_001164483,uc012aig.1_5end
|association_with_transcript=-108bp_to_ENSMUST00000121759,NM_001164483,uc012aig.1_5end
|cluster_id=chr16:91011661..91011676,-
|description=CAGE_peak_4_at_Synj1_5end
|description=CAGE_peak_4_at_Synj1_5end
|id=chr16:91011661..91011676,-
|id=chr16:91011661..91011676,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,4.69e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!4.07e-11!50;UBERON:0006238!4.07e-11!50;UBERON:0002616!1.44e-10!49;UBERON:0001049!1.98e-10!52;UBERON:0005068!1.98e-10!52;UBERON:0006241!1.98e-10!52;UBERON:0007135!1.98e-10!52;UBERON:0001017!2.56e-10!73;UBERON:0005743!2.56e-10!73;UBERON:0000073!4.16e-10!75;UBERON:0001016!4.16e-10!75;UBERON:0000033!4.36e-10!63;UBERON:0002346!2.53e-09!71;UBERON:0003075!2.53e-09!71;UBERON:0007284!2.53e-09!71;UBERON:0002020!7.11e-09!34;UBERON:0004121!1.55e-08!102;UBERON:0000924!1.55e-08!102;UBERON:0006601!1.55e-08!102;UBERON:0007811!1.57e-08!86;UBERON:0003080!1.86e-08!40;UBERON:0002021!2.09e-08!10;UBERON:0000411!2.09e-08!10;UBERON:0001950!2.09e-08!10;UBERON:0003056!2.55e-08!49;UBERON:0002780!3.32e-08!39;UBERON:0001890!3.32e-08!39;UBERON:0006240!3.32e-08!39;UBERON:0002791!2.15e-07!29;UBERON:0003528!2.15e-07!29;UBERON:0001893!2.15e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.34e-23,10;UBERON:0000411,2.34e-23,10;UBERON:0001950,2.34e-23,10;UBERON:0002020,2.46e-20,34;UBERON:0003528,6.60e-20,29;UBERON:0002791,6.60e-20,29;UBERON:0001893,6.60e-20,29;UBERON:0000073,6.19e-19,54;UBERON:0002619,1.56e-18,17;UBERON:0002780,1.78e-17,39;UBERON:0001890,1.78e-17,39;UBERON:0006240,1.78e-17,39;UBERON:0000956,3.96e-17,21;UBERON:0001869,3.96e-17,21;UBERON:0000203,3.96e-17,21;UBERON:0003080,6.44e-17,40;UBERON:0000955,2.17e-15,47;UBERON:0006238,2.17e-15,47;UBERON:0001017,4.32e-15,73;UBERON:0001049,1.10e-14,52;UBERON:0005068,1.10e-14,52;UBERON:0006241,1.10e-14,52;UBERON:0007135,1.10e-14,52;UBERON:0001016,1.61e-14,75;UBERON:0002616,4.43e-14,46;UBERON:0003056,6.34e-13,49;UBERON:0002346,5.87e-11,64;UBERON:0003075,5.87e-11,64;UBERON:0007284,5.87e-11,64;UBERON:0004121,3.87e-10,95;UBERON:0000924,3.87e-10,95;UBERON:0006601,3.87e-10,95;UBERON:0010371,5.57e-09,73;UBERON:0004684,4.69e-07,3;UBERON:0002275,4.69e-07,3;UBERON:0010314,7.06e-07,92
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0.387369970324729,2.956563165185,4.21316147379588,0.856089841127525,0.319088635981346,0.342401459862411,0.524522414513984,0.333109761815663,0,0,0.157731082679119,0.411343300817216,0.42438965179803,1.19060606211498,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0.218025156380447,0.219686182734472,0,0.279972843250725,0,1.34226084846189,0,1.00828139742739,1.28629718017973,0,0,0.202316460859598,0.528990979272033,0,0.677689064138264,0,0,0,0,0,0,0,0.135005938331691,0,1.14260393761521,0.883474163806454,0.489963196859816,0.0958454710182364,0,2.20231761998777,2.42605942361857,1.99688493233117,0.395658863190582,0.823388792421687,1.04182674111352,0.279182999001381,0,2.44477196442896,1.17851434189467,0.569486723196412,0.186399445825301,0.075726193333184,0.226714680320357,0,0,0.679971333707751,0,0,0,0.561777680527007,0.170430322578058,0,0,0.845060518660083,0,0,0,0,0.253359865475099,0,0.22836775943812,0.517875767294343,0.593768556259299,0.173485326766136,0.913396434936424,0,0.150722640552623,0.705532242814229,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0,0,1.1981512450592,0,1.27070227073065,0.449371918214468,3.66000482254901,2.01046963380583,8.34356736922927,12.2743419518559,1.66230435647648,5.353961681236,0.203678727700633,0,0.505445516867349,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.272145996605311,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.51469581422943,1.13665399758237,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,17.0334858336943,1.9551876352064,0,0,0.213288250535234,0.232236671860439,0.515469845288373,0.201683524623343,0,0,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0.203651327845314,0.387904974335251,0.140271639780637,0.442655759869801,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0,0.189491411770485,0.325929952884052,0,0.469380496577004,0.167506257441816,0.238043640886014,0.975668239288994,0,0.44292937929755,0.159454768657487,0.163863314715738,0,0.289298117163023,1.50791283939272,0,0,0.275936746304732,0.642202359951168,0.820481806145422,0,0,0.315508219416257,0,0,0,0.891194696329576,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,3.53453448063988,0.425820255624806,0,0.651547837414304,0.659880491890142,0,0.242780636154981,0,0,0,0,1.29214146584111,0.727067458955011,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.886701168211368,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0.27338845544205,0,2.88963330989554,2.37917468950219,2.48759952847963,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.352071715937262,0.13020438484395,0.209718688851422,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0,0.15241361331,0.100826185136841,0.38983152295901,0.481059208201647,0.467507608726276,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,6.7770221114048,9.66682996665071,14.8952833494243,7.04598047609119,11.6464028361009,7.55393897389701,12.1504050041725,9.45674526770863,9.06284817968409,4.14208249401456,0,0,0.341467211508268,0.243106717068294,0.838452650511929,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0,0,0.576226371643824,0.287177344778066,0,0.115884325944855,0.578727661391115,0.412085900803307,0.735994600671987,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.474540072496697,0.689531376628944,0,0.309873682371932,0.385813221962283,0.499621155875892,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0.387369970324729,2.956563165185,4.21316147379588,0.856089841127525,0.319088635981346,0.342401459862411,0.524522414513984,0.333109761815663,0,0,0.157731082679119,0.411343300817216,0.42438965179803,1.19060606211498,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0.218025156380447,0.219686182734472,0,0.279972843250725,0,1.34226084846189,0,1.00828139742739,1.28629718017973,0,0,0.202316460859598,0.528990979272033,0,0.677689064138264,0,0,0,0,0,0,0,0.135005938331691,0,1.14260393761521,0.883474163806454,0.489963196859816,0.0958454710182364,0,2.20231761998777,2.42605942361857,1.99688493233117,0.395658863190582,0.823388792421687,1.04182674111352,0.279182999001381,0,2.44477196442896,1.17851434189467,0.569486723196412,0.186399445825301,0.075726193333184,0.226714680320357,0,0,0.679971333707751,0,0,0,0.561777680527007,0.170430322578058,0,0,0.845060518660083,0,0,0,0,0.253359865475099,0,0.22836775943812,0.517875767294343,0.593768556259299,0.173485326766136,0.913396434936424,0,0.150722640552623,0.705532242814229,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0,0,1.1981512450592,0,1.27070227073065,0.449371918214468,3.66000482254901,2.01046963380583,8.34356736922927,12.2743419518559,1.66230435647648,5.353961681236,0.203678727700633,0,0.505445516867349,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.272145996605311,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.51469581422943,1.13665399758237,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,17.0334858336943,1.9551876352064,0,0,0.213288250535234,0.232236671860439,0.515469845288373,0.201683524623343,0,0,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0.203651327845314,0.387904974335251,0.140271639780637,0.442655759869801,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0,0.189491411770485,0.325929952884052,0,0.469380496577004,0.167506257441816,0.238043640886014,0.975668239288994,0,0.44292937929755,0.159454768657487,0.163863314715738,0,0.289298117163023,1.50791283939272,0,0,0.275936746304732,0.642202359951168,0.820481806145422,0,0,0.315508219416257,0,0,0,0.891194696329576,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,3.53453448063988,0.425820255624806,0,0.651547837414304,0.659880491890142,0,0.242780636154981,0,0,0,0,1.29214146584111,0.727067458955011,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.886701168211368,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0.27338845544205,0,2.88963330989554,2.37917468950219,2.48759952847963,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.352071715937262,0.13020438484395,0.209718688851422,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0,0.15241361331,0.100826185136841,0.38983152295901,0.481059208201647,0.467507608726276,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,6.7770221114048,9.66682996665071,14.8952833494243,7.04598047609119,11.6464028361009,7.55393897389701,12.1504050041725,9.45674526770863,9.06284817968409,4.14208249401456,0,0,0.341467211508268,0.243106717068294,0.838452650511929,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0,0,0.576226371643824,0.287177344778066,0,0.115884325944855,0.578727661391115,0.412085900803307,0.735994600671987,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.474540072496697,0.689531376628944,0,0.309873682371932,0.385813221962283,0.499621155875892,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0
|short_description=p4@Synj1
|short_description=p4@Synj1
}}
}}

Latest revision as of 20:14, 25 September 2015

Short description:p4@Synj1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Synj1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -108bp_to_ENSMUST00000121759, NM_001164483, uc012aig.1_5end
EntrezGene:Synj1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Synj1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F212.27
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E817.03
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.49
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron4.69e-073

Uber anatomy
Ontology termp-valuen
occipital lobe2.34e-2310
visual cortex2.34e-2310
neocortex2.34e-2310
gray matter2.46e-2034
brain grey matter6.60e-2029
regional part of telencephalon6.60e-2029
telencephalon6.60e-2029
regional part of nervous system6.19e-1954
regional part of cerebral cortex1.56e-1817
regional part of forebrain1.78e-1739
forebrain1.78e-1739
future forebrain1.78e-1739
cerebral cortex3.96e-1721
cerebral hemisphere3.96e-1721
pallium3.96e-1721
anterior neural tube6.44e-1740
brain2.17e-1547
future brain2.17e-1547
central nervous system4.32e-1573
neural tube1.10e-1452
neural rod1.10e-1452
future spinal cord1.10e-1452
neural keel1.10e-1452
nervous system1.61e-1475
regional part of brain4.43e-1446
pre-chordal neural plate6.34e-1349
neurectoderm5.87e-1164
neural plate5.87e-1164
presumptive neural plate5.87e-1164
ectoderm-derived structure3.87e-1095
ectoderm3.87e-1095
presumptive ectoderm3.87e-1095
ecto-epithelium5.57e-0973
raphe nuclei4.69e-073
reticular formation4.69e-073
structure with developmental contribution from neural crest7.06e-0792
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