Personal tools

FFCP PHASE1:Mm9::chr12:53800284..53800398,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=238161
|EntrezGene=238161
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9Q9K8,E9PYT2,Q3UHI8,Q3UHR2,Q6PGB9,Q6ZQD9
|UniProt=E9Q9K8,E9PYT2,Q3UHI8,Q3UHR2,Q6PGB9,Q6ZQD9
|association_with_transcript=0bp_to_ENSMUST00000095737,ENSMUST00000110722,NM_198111,uc007nnm.1_5end
|association_with_transcript=0bp_to_ENSMUST00000095737,ENSMUST00000110722,NM_198111,uc007nnm.1_5end
|cluster_id=chr12:53800284..53800398,+
|description=CAGE_peak_1_at_Akap6_5end
|description=CAGE_peak_1_at_Akap6_5end
|id=chr12:53800284..53800398,+
|id=chr12:53800284..53800398,+
|ontology_enrichment_celltype=CL:0000117!1.62e-13!23;CL:0000337!1.62e-13!23;CL:0000540!1.27e-12!33;CL:0000047!1.27e-12!33;CL:0000031!1.27e-12!33;CL:0000404!1.27e-12!33;CL:0000221!5.89e-11!44;CL:0000133!5.89e-11!44;CL:0002319!7.74e-11!43;CL:0000393!2.26e-08!39;CL:0000211!2.26e-08!39;CL:0000055!4.28e-07!50
|ontology_enrichment_celltype=CL:0000117!1.62e-13!23;CL:0000337!1.62e-13!23;CL:0000540!1.27e-12!33;CL:0000047!1.27e-12!33;CL:0000031!1.27e-12!33;CL:0000404!1.27e-12!33;CL:0000221!5.89e-11!44;CL:0000133!5.89e-11!44;CL:0002319!7.74e-11!43;CL:0000393!2.26e-08!39;CL:0000211!2.26e-08!39;CL:0000055!4.28e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.52e-15,23;CL:0000337,3.52e-15,23;CL:0000540,1.50e-13,33;CL:0000047,1.50e-13,33;CL:0000031,1.50e-13,33;CL:0000404,1.50e-13,33;CL:0000221,1.25e-11,44;CL:0000133,1.25e-11,44;CL:0002319,1.72e-11,43;CL:0000393,1.33e-09,39;CL:0000211,1.33e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.04e-28!75;UBERON:0001016!3.04e-28!75;UBERON:0002346!4.08e-28!71;UBERON:0003075!4.08e-28!71;UBERON:0007284!4.08e-28!71;UBERON:0004121!4.93e-28!102;UBERON:0000924!4.93e-28!102;UBERON:0006601!4.93e-28!102;UBERON:0001017!6.90e-28!73;UBERON:0005743!6.90e-28!73;UBERON:0000033!9.96e-24!63;UBERON:0001049!3.26e-23!52;UBERON:0005068!3.26e-23!52;UBERON:0006241!3.26e-23!52;UBERON:0007135!3.26e-23!52;UBERON:0000955!3.50e-22!50;UBERON:0006238!3.50e-22!50;UBERON:0002616!1.79e-21!49;UBERON:0003056!6.99e-21!49;UBERON:0002020!2.81e-18!34;UBERON:0003080!8.22e-18!40;UBERON:0002780!4.20e-17!39;UBERON:0001890!4.20e-17!39;UBERON:0006240!4.20e-17!39;UBERON:0002791!2.22e-15!29;UBERON:0003528!2.22e-15!29;UBERON:0001893!2.22e-15!29;UBERON:0007811!1.47e-11!86;UBERON:0000956!1.00e-10!21;UBERON:0001869!1.00e-10!21;UBERON:0000203!1.00e-10!21;UBERON:0000153!1.28e-09!94;UBERON:0002619!9.51e-09!17;UBERON:0002021!1.05e-08!10;UBERON:0000411!1.05e-08!10;UBERON:0001950!1.05e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.13e-31,75;UBERON:0001017,1.06e-30,73;UBERON:0002346,1.34e-30,64;UBERON:0003075,1.34e-30,64;UBERON:0007284,1.34e-30,64;UBERON:0000073,2.30e-28,54;UBERON:0004121,2.60e-28,95;UBERON:0000924,2.60e-28,95;UBERON:0006601,2.60e-28,95;UBERON:0001049,8.18e-27,52;UBERON:0005068,8.18e-27,52;UBERON:0006241,8.18e-27,52;UBERON:0007135,8.18e-27,52;UBERON:0010371,3.70e-25,73;UBERON:0003056,5.99e-24,49;UBERON:0000955,2.74e-23,47;UBERON:0006238,2.74e-23,47;UBERON:0002616,1.71e-22,46;UBERON:0002020,5.15e-21,34;UBERON:0003080,1.89e-20,40;UBERON:0010314,7.43e-20,92;UBERON:0002780,1.23e-19,39;UBERON:0001890,1.23e-19,39;UBERON:0006240,1.23e-19,39;UBERON:0003528,1.06e-17,29;UBERON:0002791,1.06e-17,29;UBERON:0001893,1.06e-17,29;UBERON:0000956,2.22e-12,21;UBERON:0001869,2.22e-12,21;UBERON:0000203,2.22e-12,21;UBERON:0002619,4.01e-10,17;UBERON:0002021,1.06e-09,10;UBERON:0000411,1.06e-09,10;UBERON:0001950,1.06e-09,10;UBERON:0003076,7.17e-07,12;UBERON:0003057,7.17e-07,12
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0408009051405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,2.18025156380447,0,0,0.979904951377538,1.43752564364972,0.167782606057736,0,0,0,0,0,65.7528497793693,79.3486468908049,51.9741750875067,0,0,0,0,0,3.89480143673926,6.91592949578798,29.0330914463737,24.5710807763677,28.604194743788,63.4145185376444,61.1805858435969,48.9963196859816,44.3764530814434,26.6573448116906,176.185409599022,122.452157223695,151.3024352574,74.2519799920991,65.871103393735,67.197824801822,93.2471216664612,119.868435936748,132.628879070271,123.74400589894,114.039716320081,80.3381611507046,2.72614295999463,10.4288752947364,0,0,0,0,0,0,5.47733238513832,0,0,0,3.66192891419369,0,0,0,0,0,0,2.96878087269556,0,4.89859058913922,11.6235168933311,14.0054120023585,8.07154240396205,12.2085338847624,15.0513545133702,2.13633205260448,0,0.433798070759735,0,0,0,0,1.86391761218122,131.458577858185,101.791099511339,0.766371165625774,0,0,0,192.031599716983,183.000241127451,80.2931310001204,200.419441181695,181.302259247204,160.204582355421,155.264888755844,0.305518091550949,0,0,12.416069497302,3.513251959993,16.3230494147766,21.2473313170312,23.811361218043,23.8808112021161,21.5231050078548,17.7096259417887,33.631438196072,0.215567992932842,0.567318240503458,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0,0,0.162137619091711,0,0,0,148.25441373771,69.1518995188791,0,0,1.91959425481711,7.89604684325491,5.7990357594942,4.63872106633688,4.89231696458715,3.99473814836374,0.949058123089023,2.30578536613615,3.77002813200404,2.78539060857611,3.11942539390592,0,0.864552199498777,1.7922714592893,0.379335801906163,3.08470984046268,0,0.407302655690628,0.581857461502877,0.49095073923223,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08440552947533,0.488894929326078,0.509235257325564,0,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0,0,0,0,0,192.339606805375,151.203075703942,0,0,1.57754109708128,1.56175497718655,4.09304455692318,1.43381278771531,0.668396022247182,1.41538265394416,1.61924280669958,3.21481443702443,3.16230222357219,173.192189551354,0,0,0.325773918707152,0,0,0.728341908464944,0.302323556964751,0.377210159511796,0.590603785761546,1.84461088766356,1.80899805217755,1.09060118843252,0.356497378384721,0.316036757935816,0,0,3.74483566329167,10.6236045478473,2.45781499187234,3.42939256050548,1.41872186913819,3.56737635204141,10.0374902567294,5.78483403317739,0,0,4.6310963591542,0,0.322928853391811,0.241251699712623,0.716234064018819,0,1.7488850197791,191.915187580878,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,2.37251995185852,5.48962561242491,5.29226170026826,2.71814784818809,1.9652630737156,1.61837215661785,2.56225712748541,0.785267825952089,1.03691978633434,0,0,0,0,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0,0,1.01362607645082,1.23253148597793,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,3.86379188064381,0,0,0.214368379079066,0.501572104035363,262.044854974319,262.845710045598,262.386145155244,150.371534550727,198.673930733486,237.193683780366,214.657155073714,212.551607921832,241.071761579597,230.921099041312,15.0491653997056,49.4790843017279,39.6101965349591,24.3106717068294,15.0921477092147,9.74370594785075,26.002867152789,21.2216108956061,24.7107791385698,20.7211713646314,24.8409713892435,27.350819500981,16.6681883296391,20.103897855129,20.3895914792427,18.0991602687568,21.3227159738534,18.9051036054431,15.2471783297223,23.2574293812348,20.9150243955103,15.9728225543404,21.2208209053116,20.784537578423,23.621454484248,20.2228912861107,19.7562210702594,21.5717163379031,20.2348129630334,25.812544496256,19.9306830448613,19.1098695808593,18.415396942636,16.8881156892703,19.097754487133,44.2164722950164,17.3109390249602,16.9748132698156,9.37312827137333,6.17655973534643,3.94175320554716
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0408009051405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,2.18025156380447,0,0,0.979904951377538,1.43752564364972,0.167782606057736,0,0,0,0,0,65.7528497793693,79.3486468908049,51.9741750875067,0,0,0,0,0,3.89480143673926,6.91592949578798,29.0330914463737,24.5710807763677,28.604194743788,63.4145185376444,61.1805858435969,48.9963196859816,44.3764530814434,26.6573448116906,176.185409599022,122.452157223695,151.3024352574,74.2519799920991,65.871103393735,67.197824801822,93.2471216664612,119.868435936748,132.628879070271,123.74400589894,114.039716320081,80.3381611507046,2.72614295999463,10.4288752947364,0,0,0,0,0,0,5.47733238513832,0,0,0,3.66192891419369,0,0,0,0,0,0,2.96878087269556,0,4.89859058913922,11.6235168933311,14.0054120023585,8.07154240396205,12.2085338847624,15.0513545133702,2.13633205260448,0,0.433798070759735,0,0,0,0,1.86391761218122,131.458577858185,101.791099511339,0.766371165625774,0,0,0,192.031599716983,183.000241127451,80.2931310001204,200.419441181695,181.302259247204,160.204582355421,155.264888755844,0.305518091550949,0,0,12.416069497302,3.513251959993,16.3230494147766,21.2473313170312,23.811361218043,23.8808112021161,21.5231050078548,17.7096259417887,33.631438196072,0.215567992932842,0.567318240503458,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0,0,0.162137619091711,0,0,0,148.25441373771,69.1518995188791,0,0,1.91959425481711,7.89604684325491,5.7990357594942,4.63872106633688,4.89231696458715,3.99473814836374,0.949058123089023,2.30578536613615,3.77002813200404,2.78539060857611,3.11942539390592,0,0.864552199498777,1.7922714592893,0.379335801906163,3.08470984046268,0,0.407302655690628,0.581857461502877,0.49095073923223,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08440552947533,0.488894929326078,0.509235257325564,0,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0,0,0,0,0,192.339606805375,151.203075703942,0,0,1.57754109708128,1.56175497718655,4.09304455692318,1.43381278771531,0.668396022247182,1.41538265394416,1.61924280669958,3.21481443702443,3.16230222357219,173.192189551354,0,0,0.325773918707152,0,0,0.728341908464944,0.302323556964751,0.377210159511796,0.590603785761546,1.84461088766356,1.80899805217755,1.09060118843252,0.356497378384721,0.316036757935816,0,0,3.74483566329167,10.6236045478473,2.45781499187234,3.42939256050548,1.41872186913819,3.56737635204141,10.0374902567294,5.78483403317739,0,0,4.6310963591542,0,0.322928853391811,0.241251699712623,0.716234064018819,0,1.7488850197791,191.915187580878,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,2.37251995185852,5.48962561242491,5.29226170026826,2.71814784818809,1.9652630737156,1.61837215661785,2.56225712748541,0.785267825952089,1.03691978633434,0,0,0,0,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0,0,1.01362607645082,1.23253148597793,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,3.86379188064381,0,0,0.214368379079066,0.501572104035363,262.044854974319,262.845710045598,262.386145155244,150.371534550727,198.673930733486,237.193683780366,214.657155073714,212.551607921832,241.071761579597,230.921099041312,15.0491653997056,49.4790843017279,39.6101965349591,24.3106717068294,15.0921477092147,9.74370594785075,26.002867152789,21.2216108956061,24.7107791385698,20.7211713646314,24.8409713892435,27.350819500981,16.6681883296391,20.103897855129,20.3895914792427,18.0991602687568,21.3227159738534,18.9051036054431,15.2471783297223,23.2574293812348,20.9150243955103,15.9728225543404,21.2208209053116,20.784537578423,23.621454484248,20.2228912861107,19.7562210702594,21.5717163379031,20.2348129630334,25.812544496256,19.9306830448613,19.1098695808593,18.415396942636,16.8881156892703,19.097754487133,44.2164722950164,17.3109390249602,16.9748132698156,9.37312827137333,6.17655973534643,3.94175320554716
|short_description=p1@Akap6
|short_description=p1@Akap6
}}
}}

Latest revision as of 16:02, 26 September 2015

Short description:p1@Akap6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Akap6_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000095737, ENSMUST00000110722, NM_198111, uc007nnm.1_5end
EntrezGene:Akap6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Akap6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A331.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C365.75
Mouse Granule cells, donor2.CNhs12357.11731-123E379.35
Mouse Granule cells, donor3.CNhs12108.11636-122C751.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D529.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F524.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.60
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F163.41
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D561.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D249.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F244.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3176.19
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3122.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7151.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D474.25
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F465.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D867.20
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E493.25
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5119.87
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6132.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6123.74
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6114.04
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E180.34
Mouse Schwann, donor1.CNhs12507.11728-123D92.73
Mouse Schwann, donor2.CNhs12573.11746-123F910.43
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C511.62
adrenal gland, embryo E16.CNhs11004.1254-43D614.01
adrenal gland, embryo E17.CNhs11043.1263-45I18.07
adrenal gland, embryo E18.CNhs11026.1262-18F512.21
adrenal gland, neonate N00.CNhs11191.1311-23C115.05
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2131.46
cerebellum, neonate N30.CNhs11135.1395-42I2101.79
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4192.03
corpus striatum, adult.CNhs10487.19-21D8183.00
corpus striatum, neonate N00.CNhs11226.630-43F180.29
cortex, adult.CNhs10473.12-14D5200.42
cortex, neonate N30.CNhs11107.1392-42F2181.30
diencephalon, adult.CNhs10482.20-12F2160.20
diencephalon, neonate N30.CNhs11201.1388-42B2155.26
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G412.42
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E216.32
eyeball, embryo E15.CNhs10593.426-16C921.25
eyeball, embryo E17.CNhs11023.1261-18D423.81
eyeball, neonate N00.CNhs11207.633-15C623.88
eyeball, neonate N01.CNhs11140.1532-43E721.52
eyeball, neonate N02.CNhs11205.1551-44G817.71
eyeball, neonate N16.CNhs11188.777-19A233.63
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8148.25
hippocampus, neonate N00.CNhs11228.627-43G169.15
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D85.80
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F73.99
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2192.34
medulla oblongata, neonate N30.CNhs11200.1396-42A3151.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I9173.19
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E610.62
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F510.04
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F84.63
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C9191.92
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G85.49
stomach, embryo E16.CNhs11022.459-17D45.29
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1262.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2262.85
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3262.39
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7150.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4198.67
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5237.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6214.66
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7212.55
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8241.07
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9230.92
whole body, embryo E11.CNhs11014.324-5I815.05
whole body, embryo E12.CNhs10587.857-27C949.48
whole body, embryo E13.CNhs10512.372-23H239.61
whole body, embryo E14.5.CNhs10578.420-27D224.31
whole body, embryo E14.CNhs10519.395-14B115.09
whole body, embryo E16.CNhs10514.453-14F29.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G526.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G524.71
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.72
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G524.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G527.35
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.91
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.26
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.62
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G525.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.89
whole body, embryo E17.5.CNhs10513.490-9F919.10
whole body, embryo E17.CNhs10517.475-3I544.22
whole body, embryo E18.CNhs10516.493-3B317.31
whole body, neonate N00.CNhs10525.657-19C216.97
whole body, neonate N01.CNhs10576.659-23C69.37
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.52e-1523
neuroblast (sensu Vertebrata)3.52e-1523
neuron1.50e-1333
neuronal stem cell1.50e-1333
neuroblast1.50e-1333
electrically signaling cell1.50e-1333
ectodermal cell1.25e-1144
neurectodermal cell1.25e-1144
neural cell1.72e-1143
electrically responsive cell1.33e-0939
electrically active cell1.33e-0939

Uber anatomy
Ontology termp-valuen
nervous system4.13e-3175
central nervous system1.06e-3073
neurectoderm1.34e-3064
neural plate1.34e-3064
presumptive neural plate1.34e-3064
regional part of nervous system2.30e-2854
ectoderm-derived structure2.60e-2895
ectoderm2.60e-2895
presumptive ectoderm2.60e-2895
neural tube8.18e-2752
neural rod8.18e-2752
future spinal cord8.18e-2752
neural keel8.18e-2752
ecto-epithelium3.70e-2573
pre-chordal neural plate5.99e-2449
brain2.74e-2347
future brain2.74e-2347
regional part of brain1.71e-2246
gray matter5.15e-2134
anterior neural tube1.89e-2040
structure with developmental contribution from neural crest7.43e-2092
regional part of forebrain1.23e-1939
forebrain1.23e-1939
future forebrain1.23e-1939
brain grey matter1.06e-1729
regional part of telencephalon1.06e-1729
telencephalon1.06e-1729
cerebral cortex2.22e-1221
cerebral hemisphere2.22e-1221
pallium2.22e-1221
regional part of cerebral cortex4.01e-1017
occipital lobe1.06e-0910
visual cortex1.06e-0910
neocortex1.06e-0910
posterior neural tube7.17e-0712
chordal neural plate7.17e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:53800284..53800398,%2B&oldid=4261848"