FFCP PHASE1:Hg19::chr12:109273861..109273889,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1610 | |EntrezGene=1610 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2671 | |HGNC=2671 | ||
|TSSclassifier=strong | |||
|UniProt=F8VV35 | |UniProt=F8VV35 | ||
|association_with_transcript=0bp_to_ENST00000547122,ENST00000547768_5end | |association_with_transcript=0bp_to_ENST00000547122,ENST00000547768_5end | ||
|cluster_id=chr12:109273861..109273889,+ | |||
|coexpression_cluster_id=C693 | |||
|description=CAGE_peak_1_at_DAO_5end | |description=CAGE_peak_1_at_DAO_5end | ||
|id=chr12:109273861..109273889,+ | |id=chr12:109273861..109273889,+ | ||
|ontology_enrichment_celltype=CL:0000181!8.26e-11!12;CL:0000417!8.26e-11!12;CL:0000668!8.26e-11!12;CL:0000414!8.26e-11!12;CL:0000412!8.26e-11!12;CL:0000182!8.26e-11!12 | |ontology_enrichment_celltype=CL:0000181!8.26e-11!12;CL:0000417!8.26e-11!12;CL:0000668!8.26e-11!12;CL:0000414!8.26e-11!12;CL:0000412!8.26e-11!12;CL:0000182!8.26e-11!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.42e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.18e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.43e-16;3!UBERON:0006241;1.91e-15;3!UBERON:0003057;1.91e-15;3!UBERON:0006601;5.30e-09;82!UBERON:0004161;4.95e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.00e-52!57;UBERON:0005068!3.00e-52!57;UBERON:0006241!3.00e-52!57;UBERON:0007135!3.00e-52!57;UBERON:0001017!1.01e-44!82;UBERON:0005743!1.92e-44!86;UBERON:0007023!4.30e-43!115;UBERON:0002616!8.09e-41!59;UBERON:0000955!1.46e-40!69;UBERON:0006238!1.46e-40!69;UBERON:0003075!4.32e-40!86;UBERON:0007284!4.32e-40!86;UBERON:0000073!2.80e-39!94;UBERON:0001016!2.80e-39!94;UBERON:0002346!7.40e-38!90;UBERON:0002780!6.65e-29!41;UBERON:0001890!6.65e-29!41;UBERON:0006240!6.65e-29!41;UBERON:0003080!4.38e-28!42;UBERON:0003076!7.31e-28!15;UBERON:0003057!7.31e-28!15;UBERON:0002020!1.19e-23!34;UBERON:0003528!1.19e-23!34;UBERON:0001893!1.97e-23!34;UBERON:0000025!4.08e-23!194;UBERON:0000033!1.28e-21!123;UBERON:0002791!1.38e-21!33;UBERON:0003056!4.03e-21!61;UBERON:0000153!3.54e-20!129;UBERON:0007811!3.54e-20!129;UBERON:0004733!4.79e-20!12;UBERON:0002028!4.79e-20!12;UBERON:0007277!4.79e-20!12;UBERON:0001869!1.65e-19!32;UBERON:0002298!1.78e-18!8;UBERON:0004732!2.39e-18!13;UBERON:0004121!2.12e-17!169;UBERON:0000924!9.13e-17!173;UBERON:0006601!9.13e-17!173;UBERON:0004111!3.14e-16!241;UBERON:0000483!2.23e-15!309;UBERON:0002308!3.58e-15!9;UBERON:0000125!3.58e-15!9;UBERON:0000119!4.22e-15!312;UBERON:0002619!3.78e-14!22;UBERON:0000477!2.29e-13!286;UBERON:0000475!1.40e-12!365;UBERON:0002680!2.96e-12!9;UBERON:0001895!2.96e-12!9;UBERON:0010092!2.96e-12!9;UBERON:0000956!3.28e-12!25;UBERON:0000203!3.28e-12!25;UBERON:0001950!7.05e-11!20;UBERON:0002107!9.39e-11!19;UBERON:0006925!9.39e-11!19;UBERON:0008836!9.39e-11!19;UBERON:0001896!2.59e-10!3;UBERON:0005290!2.59e-10!3;UBERON:0010096!2.59e-10!3;UBERON:0009663!4.43e-10!7;UBERON:0000988!4.43e-10!3;UBERON:0000062!5.29e-10!511;UBERON:0006331!6.32e-10!3;UBERON:0002240!6.71e-10!3;UBERON:0008835!4.80e-09!22;UBERON:0003894!4.80e-09!22;UBERON:0009854!1.42e-08!23;UBERON:0002420!9.38e-08!9;UBERON:0007245!9.38e-08!9;UBERON:0010009!9.38e-08!9;UBERON:0010011!9.38e-08!9;UBERON:0000454!9.38e-08!9;UBERON:0007499!9.45e-08!25;UBERON:0009497!9.45e-08!25;UBERON:0000015!9.45e-08!25;UBERON:0002423!9.45e-08!25;UBERON:0006235!9.45e-08!25;UBERON:0004161!9.45e-08!25;UBERON:0002368!1.41e-07!35;UBERON:0000481!1.76e-07!347;UBERON:0005057!2.18e-07!26;UBERON:0009856!2.18e-07!26;UBERON:0002148!2.78e-07!2;UBERON:0009662!2.78e-07!2;UBERON:0005172!6.00e-07!55;UBERON:0005173!6.00e-07!55;UBERON:0002417!6.44e-07!61;UBERON:0000916!6.44e-07!61;UBERON:0001894!6.63e-07!7;UBERON:0006222!6.63e-07!7;UBERON:0001897!6.95e-07!2;UBERON:0001875!6.95e-07!2;UBERON:0006514!6.95e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;4.54e-33;12!UBERON:0002028;4.54e-33;12!UBERON:0004732;2.12e-30;13!UBERON:0002298;4.86e-30;6!UBERON:0002680;5.56e-20;9!UBERON:0001895;5.56e-20;9!UBERON:0000073;5.73e-19;53!UBERON:0002616;5.73e-19;53!UBERON:0001896;4.12e-16;3!UBERON:0005290;4.12e-16;3!UBERON:0000988;1.03e-15;3!UBERON:0002240;1.91e-15;3!UBERON:0005174;1.91e-15;3!UBERON:0001137;1.91e-15;3!UBERON:0001017;4.34e-15;75!UBERON:0000955;6.80e-15;68!UBERON:0000125;2.68e-13;9!UBERON:0002308;2.68e-13;9!UBERON:0001016;1.59e-12;83!UBERON:0002107;1.51e-11;19!UBERON:0006925;1.51e-11;19!UBERON:0002784;3.59e-11;4!UBERON:0002148;4.49e-11;2!UBERON:0006331;4.49e-11;2!UBERON:0009662;4.49e-11;2!UBERON:0001894;5.74e-11;7!UBERON:0001897;2.09e-10;2!UBERON:0001875;2.09e-10;2!UBERON:0006514;2.09e-10;2!UBERON:0010225;2.09e-10;2!UBERON:0007023;3.30e-10;114!UBERON:0002780;3.19e-09;41!UBERON:0001890;3.19e-09;41!UBERON:0002021;9.52e-09;5!UBERON:0002423;1.49e-08;25!UBERON:0002037;2.20e-08;6!UBERON:0002368;3.22e-07;33!UBERON:0002365;8.43e-07;31!UBERON:0002330;8.43e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,3.60e-46,15;UBERON:0003057,3.60e-46,15;UBERON:0001049,7.54e-40,56;UBERON:0005068,7.54e-40,56;UBERON:0006241,7.54e-40,56;UBERON:0007135,7.54e-40,56;UBERON:0001017,1.40e-33,81;UBERON:0004733,4.64e-33,12;UBERON:0002028,4.64e-33,12;UBERON:0007277,4.64e-33,12;UBERON:0000073,2.36e-31,53;UBERON:0002616,2.36e-31,53;UBERON:0004732,2.16e-30,13;UBERON:0002298,4.99e-30,6;UBERON:0001016,1.03e-29,89;UBERON:0000955,2.08e-28,68;UBERON:0006238,2.08e-28,68;UBERON:0007023,3.89e-27,114;UBERON:0003075,1.08e-25,82;UBERON:0007284,1.08e-25,82;UBERON:0002346,2.89e-24,86;UBERON:0002680,5.57e-20,9;UBERON:0001895,5.57e-20,9;UBERON:0010092,5.57e-20,9;UBERON:0010371,3.40e-19,104;UBERON:0011216,7.60e-19,223;UBERON:0000025,2.17e-17,192;UBERON:0001896,4.23e-16,3;UBERON:0005290,4.23e-16,3;UBERON:0010096,4.23e-16,3;UBERON:0000988,1.03e-15,3;UBERON:0010314,1.65e-15,132;UBERON:0002240,2.06e-15,3;UBERON:0005174,2.06e-15,3;UBERON:0001137,2.06e-15,3;UBERON:0000125,2.65e-13,9;UBERON:0002308,2.65e-13,9;UBERON:0004121,6.11e-13,171;UBERON:0000924,6.11e-13,171;UBERON:0006601,6.11e-13,171;UBERON:0004111,1.40e-12,240;UBERON:0002107,1.63e-11,19;UBERON:0006925,1.63e-11,19;UBERON:0008836,1.63e-11,19;UBERON:0002780,2.65e-11,41;UBERON:0001890,2.65e-11,41;UBERON:0003080,2.65e-11,41;UBERON:0006240,2.65e-11,41;UBERON:0002784,3.47e-11,4;UBERON:0002148,4.49e-11,2;UBERON:0006331,4.49e-11,2;UBERON:0009662,4.49e-11,2;UBERON:0001894,5.59e-11,7;UBERON:0006222,5.59e-11,7;UBERON:0001897,2.04e-10,2;UBERON:0001875,2.04e-10,2;UBERON:0006514,2.04e-10,2;UBERON:0010225,2.04e-10,2;UBERON:0008835,8.09e-10,22;UBERON:0003894,8.09e-10,22;UBERON:0009854,2.37e-09,23;UBERON:0000483,3.01e-09,306;UBERON:0000119,4.30e-09,309;UBERON:0002021,1.11e-08,5;UBERON:0007499,1.57e-08,25;UBERON:0009497,1.57e-08,25;UBERON:0000015,1.57e-08,25;UBERON:0002423,1.57e-08,25;UBERON:0006235,1.57e-08,25;UBERON:0004161,1.57e-08,25;UBERON:0002037,2.20e-08,6;UBERON:0006215,2.20e-08,6;UBERON:0009856,3.63e-08,26;UBERON:0002368,1.54e-07,35;UBERON:0003528,2.08e-07,34;UBERON:0002020,2.08e-07,34;UBERON:0005172,4.92e-07,54;UBERON:0005173,4.92e-07,54;UBERON:0003056,5.30e-07,61 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,23.9036812783326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.5179201966619,8.84544495009863,14.7697476670351,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.9512693247132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.3565548567461,0,0,0,0,0,0,0,0,0,0,0,0,2.35012956480441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,1.25966373927138,0,0,0,0,0,0,0,0,0,8.72399471485697,1.94813006139888,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,119.013754327325,74.0881041539205,77.4334761658294,3.94893714877151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.500961420836,0,4.45102446878144,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,9.00630433064684,1.36905378891993,0,0,0,0,0,0,0,0,0,0,0,0,1.3393140992228,0.824158583811665,1.01105315781277,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.242998226632099,0,8.11698785181741,9.17955292362467,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,35.465640550096,7.95041333473328,69.6835134788758,16.5290752178363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,91.1720621147213,43.8169753570567,73.2737554708325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,1.41696576325585,0,1.23069818544453,0,1.24483054435592,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,0,0.206686796501184,0.951237152908602,0,0,0,0,0,2.67850917939143,0,0,0,0,0,0,28.6152575832462,0.197318320688547,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50962843566674,0,0,0,0,0,95.0132980836335,30.8928256340169,1.2679671827502,0,0,0,0,0,0,0,0,0,5.5902437429066,0,0.951880862672806,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,9.12086383404657,1.34462894620464,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,23.9036812783326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.5179201966619,8.84544495009863,14.7697476670351,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.9512693247132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.3565548567461,0,0,0,0,0,0,0,0,0,0,0,0,2.35012956480441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,1.25966373927138,0,0,0,0,0,0,0,0,0,8.72399471485697,1.94813006139888,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,119.013754327325,74.0881041539205,77.4334761658294,3.94893714877151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.500961420836,0,4.45102446878144,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,9.00630433064684,1.36905378891993,0,0,0,0,0,0,0,0,0,0,0,0,1.3393140992228,0.824158583811665,1.01105315781277,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.242998226632099,0,8.11698785181741,9.17955292362467,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,35.465640550096,7.95041333473328,69.6835134788758,16.5290752178363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,91.1720621147213,43.8169753570567,73.2737554708325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,1.41696576325585,0,1.23069818544453,0,1.24483054435592,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,0,0.206686796501184,0.951237152908602,0,0,0,0,0,2.67850917939143,0,0,0,0,0,0,28.6152575832462,0.197318320688547,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50962843566674,0,0,0,0,0,95.0132980836335,30.8928256340169,1.2679671827502,0,0,0,0,0,0,0,0,0,5.5902437429066,0,0.951880862672806,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,9.12086383404657,1.34462894620464,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p1@DAO | |short_description=p1@DAO | ||
}} | }} |
Latest revision as of 05:55, 16 September 2015
Short description: | p1@DAO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DAO_5end |
Coexpression cluster: | C693_cerebellum_medulla_spinal_locus_Hepatocyte_pons_thalamus |
Association with transcript: | 0bp_to_ENST00000547122, ENST00000547768_5end |
EntrezGene: | DAO |
HGNC: | 2671 |
UniProt: | F8VV35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.18e-10 | 12 |