Personal tools

FFCP PHASE1:Mm9::chr17:48015645..48015689,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74123
|EntrezGene=74123
|HGNC=
|HGNC=
|MCL_coexpression_id=53
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=212bp_to_ENSMUST00000154108_5end
|association_with_transcript=212bp_to_ENSMUST00000154108_5end
|cluster_id=chr17:48015645..48015689,-
|description=CAGE_peak_9_at_Foxp4_5end
|description=CAGE_peak_9_at_Foxp4_5end
|id=chr17:48015645..48015689,-
|id=chr17:48015645..48015689,-
|ontology_enrichment_celltype=CL:0000117!2.01e-08!23;CL:0000337!2.01e-08!23
|ontology_enrichment_celltype=CL:0000117!2.01e-08!23;CL:0000337!2.01e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,9.34e-12,23;CL:0000337,9.34e-12,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.06e-16!71;UBERON:0003075!1.06e-16!71;UBERON:0007284!1.06e-16!71;UBERON:0003056!5.07e-16!49;UBERON:0000033!6.04e-13!63;UBERON:0004121!7.25e-13!102;UBERON:0000924!7.25e-13!102;UBERON:0006601!7.25e-13!102;UBERON:0001017!2.30e-12!73;UBERON:0005743!2.30e-12!73;UBERON:0001049!6.46e-12!52;UBERON:0005068!6.46e-12!52;UBERON:0006241!6.46e-12!52;UBERON:0007135!6.46e-12!52;UBERON:0000073!3.02e-11!75;UBERON:0001016!3.02e-11!75;UBERON:0003080!4.79e-11!40;UBERON:0000955!5.40e-11!50;UBERON:0006238!5.40e-11!50;UBERON:0002616!7.47e-11!49;UBERON:0002780!1.48e-10!39;UBERON:0001890!1.48e-10!39;UBERON:0006240!1.48e-10!39;UBERON:0007811!1.87e-10!86;UBERON:0002020!5.14e-10!34;UBERON:0000153!9.69e-09!94;UBERON:0002791!1.07e-07!29;UBERON:0003528!1.07e-07!29;UBERON:0001893!1.07e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.73e-25,64;UBERON:0003075,6.73e-25,64;UBERON:0007284,6.73e-25,64;UBERON:0003056,1.86e-22,49;UBERON:0000073,1.31e-21,54;UBERON:0010371,4.65e-20,73;UBERON:0001049,2.66e-19,52;UBERON:0005068,2.66e-19,52;UBERON:0006241,2.66e-19,52;UBERON:0007135,2.66e-19,52;UBERON:0004121,1.04e-18,95;UBERON:0000924,1.04e-18,95;UBERON:0006601,1.04e-18,95;UBERON:0001017,2.99e-17,73;UBERON:0010314,4.53e-17,92;UBERON:0001016,1.94e-16,75;UBERON:0003080,3.44e-15,40;UBERON:0002020,3.84e-15,34;UBERON:0002616,1.35e-14,46;UBERON:0002780,2.27e-14,39;UBERON:0001890,2.27e-14,39;UBERON:0006240,2.27e-14,39;UBERON:0000955,4.37e-14,47;UBERON:0006238,4.37e-14,47;UBERON:0003528,3.73e-11,29;UBERON:0002791,3.73e-11,29;UBERON:0001893,3.73e-11,29;UBERON:0002021,1.74e-10,10;UBERON:0000411,1.74e-10,10;UBERON:0001950,1.74e-10,10;UBERON:0000970,9.14e-09,9;UBERON:0000019,9.14e-09,9;UBERON:0000047,9.14e-09,9;UBERON:0010312,9.14e-09,9;UBERON:0004088,9.14e-09,9;UBERON:0002104,9.14e-09,9;UBERON:0001456,9.14e-09,9;UBERON:0003072,9.14e-09,9;UBERON:0004128,9.14e-09,9;UBERON:0003071,9.14e-09,9;UBERON:0002420,1.88e-08,8;UBERON:0007245,1.88e-08,8;UBERON:0010009,1.88e-08,8;UBERON:0010011,1.88e-08,8;UBERON:0000454,1.88e-08,8;UBERON:0000025,7.06e-08,114;UBERON:0001444,8.90e-07,11
|phase1_expression=0,0.697950815278722,0,0.30246421130683,0,0.671517087647559,0.233612640595526,0.129123323441576,0.281577444303333,0.468129052643987,0.171217968225505,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0,0,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0.279972843250725,0,0,0,0.336093799142464,0,0,0,3.64169629547276,5.28990979272033,3.1691570175309,0,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.270011876663381,0.420649922702764,5.14171771926846,2.65042249141936,0.489963196859816,0.479227355091182,0,7.70811166995721,4.34136949489638,4.91540906419979,3.56092976871523,3.47653045689157,3.64639359389732,2.79182999001381,5.6276261003168,5.34793867218835,4.41942878210502,2.56269025438385,1.67759501242771,0,0,0,0,0,0.539703191637817,0,0,1.12355536105401,0.340860645156116,0.259786004602869,0,0,0,0,0,0.432982082022428,0,0,0.45673551887624,0.258937883647172,1.48442139064825,0.693941307064543,1.21786191324856,1.15307748628029,0.150722640552623,0.587943535678524,0.251333182659351,0.247194967734374,0.144599356919912,1.76922110389975,0.647067399789637,7.06692859073259,6.30337829075789,1.86391761218122,0,0,0.510914110417183,0,0,0.127070227073065,3.44518470631092,1.37250180845588,1.7591609295801,1.91206752211504,1.79000820131231,3.74018480207208,3.24482526135515,0.203678727700633,3.98102305952298,0,3.15662783829711,1.56144531555244,0.919608417733892,4.32149111532838,6.48030716693575,13.0630078370549,18.7046031615881,17.9907311154679,11.6416516832557,0.215567992932842,0.189106080167819,0.175951124163949,0,0.556094498451196,0,0,0.199034266818493,0,0,0.568326998791185,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.16455984991348,1.14917224855367,0.405344047729279,0.584799949701329,1.09775057645525,0.402619256281115,2.3131894342054,0.617427674275707,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,1.68824011826692,2.80088436959562,4.89083433666378,6.48540907100142,1.37280706594041,1.43768206527355,0.372140947668503,0.936113019343682,0.252578877947112,0,0,0,0,0.488894929326078,0.169745085775188,0.704070744865506,0.335012514883631,0.238043640886014,0.195133647857799,0.945810864637146,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,3.21101179975584,3.8679856575427,0,0,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0,0.162886959353576,0,0,0.485561272309963,1.51161778482376,1.13163047853539,0.590603785761546,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,0.316036757935816,0,0,6.46835250932197,1.08036656418786,0.129358683782755,1.28602221018955,2.12808280370728,1.96205699362278,0.987294123612726,0.608929898229199,0.23467170806371,0,0,0.32977250588296,0,0.120625849856312,0,0.328281799490123,0,1.8542530201051,0,0.82554747185289,3.51869602002452,3.76736914009382,0.956859594047176,0.457556346413045,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0.316335993581135,0.406638934253697,0.108005340821801,0,0,0,0.578574190077352,0.523511883968059,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.352071715937262,0.5208175393758,0.104859344425711,0,0.288030006257865,0.316011120628178,1.41907650703115,1.54066435747241,1.03936658382236,0.537080087002444,0.993406773906324,0.480781798079875,0.295379054349154,0.504832249740738,0.685861259894999,0.201652370273681,0.292373642219257,0.192423683280659,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,2.82375921308533,3.22227665555024,2.86447756719698,1.71853182343688,5.48066015816514,4.5323633843382,6.07520250208625,1.80128481289688,3.17199686288943,4.14208249401456,0.518936737920883,0,0.341467211508268,0,0.628839487883947,0.919217542250071,1.11123363900808,1.44224540067226,0.64183841918363,2.02157769411038,1.2673964994512,0.754505365544305,1.31098110457835,0.704276676453562,0.631790158511746,1.42888107384922,0.463537303779422,0.964546102318525,1.23625770240992,0.588795680537589,0.685738504770831,1.4198064492747,0.238436189947321,1.16277133305863,0.752875043322645,0.846146078916765,0.914639864363863,1.05227884575137,0.679020569229309,0,0.474540072496697,0.689531376628944,0,0.619747364743864,0.578719832943424,1.24905288968973,0.701794825336225,1.28922632428979,0.382576664137687,0.441182838239031,4.17362104116759
|phase1_expression=0,0.697950815278722,0,0.30246421130683,0,0.671517087647559,0.233612640595526,0.129123323441576,0.281577444303333,0.468129052643987,0.171217968225505,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0.319984845586813,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0,0,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0.279972843250725,0,0,0,0.336093799142464,0,0,0,3.64169629547276,5.28990979272033,3.1691570175309,0,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.270011876663381,0.420649922702764,5.14171771926846,2.65042249141936,0.489963196859816,0.479227355091182,0,7.70811166995721,4.34136949489638,4.91540906419979,3.56092976871523,3.47653045689157,3.64639359389732,2.79182999001381,5.6276261003168,5.34793867218835,4.41942878210502,2.56269025438385,1.67759501242771,0,0,0,0,0,0.539703191637817,0,0,1.12355536105401,0.340860645156116,0.259786004602869,0,0,0,0,0,0.432982082022428,0,0,0.45673551887624,0.258937883647172,1.48442139064825,0.693941307064543,1.21786191324856,1.15307748628029,0.150722640552623,0.587943535678524,0.251333182659351,0.247194967734374,0.144599356919912,1.76922110389975,0.647067399789637,7.06692859073259,6.30337829075789,1.86391761218122,0,0,0.510914110417183,0,0,0.127070227073065,3.44518470631092,1.37250180845588,1.7591609295801,1.91206752211504,1.79000820131231,3.74018480207208,3.24482526135515,0.203678727700633,3.98102305952298,0,3.15662783829711,1.56144531555244,0.919608417733892,4.32149111532838,6.48030716693575,13.0630078370549,18.7046031615881,17.9907311154679,11.6416516832557,0.215567992932842,0.189106080167819,0.175951124163949,0,0.556094498451196,0,0,0.199034266818493,0,0,0.568326998791185,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.16455984991348,1.14917224855367,0.405344047729279,0.584799949701329,1.09775057645525,0.402619256281115,2.3131894342054,0.617427674275707,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,1.68824011826692,2.80088436959562,4.89083433666378,6.48540907100142,1.37280706594041,1.43768206527355,0.372140947668503,0.936113019343682,0.252578877947112,0,0,0,0,0.488894929326078,0.169745085775188,0.704070744865506,0.335012514883631,0.238043640886014,0.195133647857799,0.945810864637146,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,3.21101179975584,3.8679856575427,0,0,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0,0.162886959353576,0,0,0.485561272309963,1.51161778482376,1.13163047853539,0.590603785761546,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,0.316036757935816,0,0,6.46835250932197,1.08036656418786,0.129358683782755,1.28602221018955,2.12808280370728,1.96205699362278,0.987294123612726,0.608929898229199,0.23467170806371,0,0,0.32977250588296,0,0.120625849856312,0,0.328281799490123,0,1.8542530201051,0,0.82554747185289,3.51869602002452,3.76736914009382,0.956859594047176,0.457556346413045,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0.316335993581135,0.406638934253697,0.108005340821801,0,0,0,0.578574190077352,0.523511883968059,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.352071715937262,0.5208175393758,0.104859344425711,0,0.288030006257865,0.316011120628178,1.41907650703115,1.54066435747241,1.03936658382236,0.537080087002444,0.993406773906324,0.480781798079875,0.295379054349154,0.504832249740738,0.685861259894999,0.201652370273681,0.292373642219257,0.192423683280659,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,2.82375921308533,3.22227665555024,2.86447756719698,1.71853182343688,5.48066015816514,4.5323633843382,6.07520250208625,1.80128481289688,3.17199686288943,4.14208249401456,0.518936737920883,0,0.341467211508268,0,0.628839487883947,0.919217542250071,1.11123363900808,1.44224540067226,0.64183841918363,2.02157769411038,1.2673964994512,0.754505365544305,1.31098110457835,0.704276676453562,0.631790158511746,1.42888107384922,0.463537303779422,0.964546102318525,1.23625770240992,0.588795680537589,0.685738504770831,1.4198064492747,0.238436189947321,1.16277133305863,0.752875043322645,0.846146078916765,0.914639864363863,1.05227884575137,0.679020569229309,0,0.474540072496697,0.689531376628944,0,0.619747364743864,0.578719832943424,1.24905288968973,0.701794825336225,1.28922632428979,0.382576664137687,0.441182838239031,4.17362104116759
|short_description=p9@Foxp4
|short_description=p9@Foxp4
}}
}}

Latest revision as of 14:54, 26 September 2015

Short description:p9@Foxp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Foxp4_5end
Coexpression cluster:MCL_coexpression_mm9:53
Association with transcript: 212bp_to_ENSMUST00000154108_5end
EntrezGene:Foxp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Foxp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D46.48
eyeball, neonate N00.CNhs11207.633-15C613.06
eyeball, neonate N01.CNhs11140.1532-43E718.70
eyeball, neonate N02.CNhs11205.1551-44G817.99
eyeball, neonate N16.CNhs11188.777-19A211.64
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F46.49
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.34e-1223
neuroblast (sensu Vertebrata)9.34e-1223

Uber anatomy
Ontology termp-valuen
neurectoderm6.73e-2564
neural plate6.73e-2564
presumptive neural plate6.73e-2564
pre-chordal neural plate1.86e-2249
regional part of nervous system1.31e-2154
ecto-epithelium4.65e-2073
neural tube2.66e-1952
neural rod2.66e-1952
future spinal cord2.66e-1952
neural keel2.66e-1952
ectoderm-derived structure1.04e-1895
ectoderm1.04e-1895
presumptive ectoderm1.04e-1895
central nervous system2.99e-1773
structure with developmental contribution from neural crest4.53e-1792
nervous system1.94e-1675
anterior neural tube3.44e-1540
gray matter3.84e-1534
regional part of brain1.35e-1446
regional part of forebrain2.27e-1439
forebrain2.27e-1439
future forebrain2.27e-1439
brain4.37e-1447
future brain4.37e-1447
brain grey matter3.73e-1129
regional part of telencephalon3.73e-1129
telencephalon3.73e-1129
occipital lobe1.74e-1010
visual cortex1.74e-1010
neocortex1.74e-1010
eye9.14e-099
camera-type eye9.14e-099
simple eye9.14e-099
immature eye9.14e-099
ocular region9.14e-099
visual system9.14e-099
face9.14e-099
optic cup9.14e-099
optic vesicle9.14e-099
eye primordium9.14e-099
basal ganglion1.88e-088
nuclear complex of neuraxis1.88e-088
aggregate regional part of brain1.88e-088
collection of basal ganglia1.88e-088
cerebral subcortex1.88e-088
tube7.06e-08114
subdivision of head8.90e-0711
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:48015645..48015689,-&oldid=4259247"