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FFCP PHASE1:Mm9::chr2:30214798..30214861,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=227700
|EntrezGene=227700
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=Q8R3V5,A2AWI7,F2Z4A8
|UniProt=Q8R3V5,A2AWI7,F2Z4A8
|association_with_transcript=0bp_to_ENSMUST00000028214,ENSMUST00000113621,ENSMUST00000128387,ENSMUST00000151354_5end
|association_with_transcript=0bp_to_ENSMUST00000028214,ENSMUST00000113621,ENSMUST00000128387,ENSMUST00000151354_5end
|cluster_id=chr2:30214798..30214861,-
|description=CAGE_peak_2_at_Sh3glb2_5end
|description=CAGE_peak_2_at_Sh3glb2_5end
|id=chr2:30214798..30214861,-
|id=chr2:30214798..30214861,-
|ontology_enrichment_celltype=CL:0000117!1.01e-10!23;CL:0000337!1.01e-10!23;CL:0002319!2.18e-08!43;CL:0000221!2.19e-08!44;CL:0000133!2.19e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-10,23;CL:0000337,1.01e-10,23;CL:0002319,2.18e-08,43;CL:0000221,2.19e-08,44;CL:0000133,2.19e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.61e-21!73;UBERON:0005743!3.61e-21!73;UBERON:0001049!8.89e-21!52;UBERON:0005068!8.89e-21!52;UBERON:0006241!8.89e-21!52;UBERON:0007135!8.89e-21!52;UBERON:0000073!2.77e-20!75;UBERON:0001016!2.77e-20!75;UBERON:0000955!3.55e-20!50;UBERON:0006238!3.55e-20!50;UBERON:0002616!1.02e-19!49;UBERON:0000033!2.46e-17!63;UBERON:0004121!6.70e-17!102;UBERON:0000924!6.70e-17!102;UBERON:0006601!6.70e-17!102;UBERON:0002346!3.69e-15!71;UBERON:0003075!3.69e-15!71;UBERON:0007284!3.69e-15!71;UBERON:0002020!3.73e-15!34;UBERON:0003080!2.99e-14!40;UBERON:0007811!6.09e-14!86;UBERON:0002780!1.19e-13!39;UBERON:0001890!1.19e-13!39;UBERON:0006240!1.19e-13!39;UBERON:0002791!6.91e-13!29;UBERON:0003528!6.91e-13!29;UBERON:0001893!6.91e-13!29;UBERON:0003056!6.63e-12!49;UBERON:0000153!8.98e-10!94;UBERON:0000956!1.85e-08!21;UBERON:0001869!1.85e-08!21;UBERON:0000203!1.85e-08!21;UBERON:0002619!4.73e-08!17;UBERON:0000064!5.35e-08!99;UBERON:0003076!2.06e-07!12;UBERON:0003057!2.06e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.41e-22,54;UBERON:0001017,3.61e-21,73;UBERON:0001049,8.89e-21,52;UBERON:0005068,8.89e-21,52;UBERON:0006241,8.89e-21,52;UBERON:0007135,8.89e-21,52;UBERON:0001016,2.77e-20,75;UBERON:0000955,4.20e-18,47;UBERON:0006238,4.20e-18,47;UBERON:0002616,1.18e-17,46;UBERON:0004121,1.55e-17,95;UBERON:0000924,1.55e-17,95;UBERON:0006601,1.55e-17,95;UBERON:0002346,3.36e-16,64;UBERON:0003075,3.36e-16,64;UBERON:0007284,3.36e-16,64;UBERON:0010314,6.57e-16,92;UBERON:0010371,1.60e-15,73;UBERON:0002020,3.73e-15,34;UBERON:0003080,2.99e-14,40;UBERON:0002780,1.19e-13,39;UBERON:0001890,1.19e-13,39;UBERON:0006240,1.19e-13,39;UBERON:0003528,6.91e-13,29;UBERON:0002791,6.91e-13,29;UBERON:0001893,6.91e-13,29;UBERON:0003056,6.63e-12,49;UBERON:0000956,1.85e-08,21;UBERON:0001869,1.85e-08,21;UBERON:0000203,1.85e-08,21;UBERON:0002619,4.73e-08,17;UBERON:0003076,2.06e-07,12;UBERON:0003057,2.06e-07,12
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|phase1_expression=6.24580503708696,13.2610654902957,11.3749809847384,17.5429242557961,12.0214975187123,5.54001597309236,3.27057696833736,5.55230290798778,0.84473233291,0.70219357896598,0.513653904676515,1.11681022593471,6.67682846731702,7.34331380319578,3.66420737997229,2.02475267389826,2.79824751251259,5.8360500591274,5.21034847701807,5.09267582157636,7.48380953329414,5.56029326724958,3.6567970479451,6.39969691173627,6.42345986988076,11.4846392823004,6.03066794622705,6.67960821326256,5.13063232532209,8.06496415231778,5.32153225572731,4.44521471421742,5.53558308826113,31.6963362030877,2.88851619751275,4.82080471539628,6.32925004413344,6.27797446105362,3.906676722619,2.09409497589519,4.1176204162171,2.73218193983378,5.34061388334269,2.01434908760924,2.73717714292689,3.67093504323363,12.5182615095686,10.0291571935005,14.4992880604751,14.7766723296455,11.8988458381558,14.3752564364972,5.5368259999053,9.42970784614748,4.7053131879945,6.94600477297057,2.57880095944881,3.6097046459421,12.7459370341547,8.46385566835253,12.0427966666174,10.8430250262122,16.0073063300005,22.0475430733943,10.8775299882367,22.0248835633291,16.7776061890307,23.4373166246148,8.08778976006126,6.07526722492608,5.67877395648731,19.9955689082663,18.1112203580323,7.96190194897201,10.9263836960789,8.27296907949019,20.9220173898839,26.558966321719,31.4893393175299,12.6610836220986,16.8337264228434,11.9810075228055,40.7607178542016,26.449842671489,31.9348337853533,10.0173719061047,12.2439645487229,7.82877672466262,4.16494063332512,4.6854367266207,2.6087803983151,5.16254326188832,4.0798280022465,9.17495425784289,6.49776417447669,3.13618820968135,6.46044332606059,6.98764322570037,5.19572009205738,6.36011234118612,6.05626705039726,3.84979432242953,2.54805239706646,21.3320010945999,4.5463118612355,4.05375784760158,4.04419556011827,5.709193985953,1.55362730188303,8.01587550950054,5.20455980298408,4.56698217468212,4.15107895060905,4.06951129492081,5.17390311397101,8.54532821041793,3.70792451601561,5.92857363371638,2.65383165584962,5.17653919831709,4.19598885074748,2.90925151881133,16.775258509631,19.0307518057506,21.154117388159,8.43008282188352,3.95389910869537,5.39912457894067,4.44745794755726,19.7723644014366,16.0125210986519,12.5654352112864,15.1227158567281,17.3886510984625,19.3242881440391,18.6577452527921,3.56437773476107,3.6078021476927,6.06534620240819,7.99679052368601,3.6433724029557,4.59804208866946,5.40186389416048,3.76762044589288,6.25935792192216,4.22775276940004,7.21503279109912,5.17406741478031,2.37124792226126,2.08016688184601,2.81521798662318,3.06874025398605,3.61461423993277,3.83077383174383,4.11564272815887,4.37875387000685,4.21327912387941,3.60287069960601,3.6941254921427,5.17814431338755,7.27030785941398,7.02242039697958,4.97163944728941,5.90292695242211,6.63348585415727,6.27841650826101,8.04820204198858,7.23945122676451,8.06343264576054,5.41752631461014,7.62046809731044,7.74859933354261,5.92785311285837,6.84452735677896,14.930586348053,7.9236551532049,10.5734010554815,6.61126416658861,2.34617075588757,1.85789337488351,3.47942145569652,2.62188582010345,3.55804870151792,6.27744566171445,8.54152310780121,3.12928013975621,7.79139147280835,8.55512829776949,4.48417400373976,8.08937467788799,7.3486936957396,6.57166201739412,2.0863469104839,2.51346727741403,1.1270773567308,2.44381593414377,4.07300223052014,3.43665517462561,5.24863258131335,4.57591458736767,5.49495547444812,4.68909222902842,5.33614728756868,1.50160595144485,3.14494392181125,1.12431056192427,2.63718157805054,2.17059443777175,3.56476192493988,3.74004978686054,2.10775794807546,1.64736847912849,1.43768206527355,4.09355042435354,4.99260276983297,3.78868316920668,3.94674309748207,2.41221760681684,4.43407656399851,3.03186258832776,4.07412441105065,2.37643120085263,2.81628297946203,3.68513766371995,4.76087281772027,4.87834119644497,2.83743259391144,4.87222317227305,3.6674596791222,4.09658286789345,6.38934432903814,5.78596234326046,6.03165135757089,4.35124547054968,5.90117127622843,5.24279817978992,23.4403861382176,20.5120451536356,2.78689407140348,6.81671503451807,3.15508219416257,3.51394869866975,4.95473814785438,3.10659437338318,4.23317480756549,5.66153061577665,3.23848561339915,5.26060544240361,3.55759000151871,11.2462460747632,4.82596289708113,4.45164009168138,4.39794790254655,4.12425307431339,3.98235415019888,3.64170954232472,2.41858845571801,5.28094223316515,6.496641643377,4.61152721915891,4.39328098385976,4.72593848320757,4.63446591900138,4.10847785316561,4.21674434299995,9.28219889233682,10.5536277783674,3.78128297465751,7.37344497561701,5.35842587578981,5.14286677562593,6.95638388648075,6.41741180348272,10.9607381681256,3.75474732901937,4.44847348814022,6.61585194164886,6.76033637060068,3.87514624070173,4.52346936961169,6.92359595218192,6.72977688954751,6.70405924248657,25.9595422814714,2.9048049735635,3.50857675537478,2.59272338317596,4.1441060541032,3.00727300986255,3.88922894451088,5.09935289981566,4.05859211738608,4.69879910935041,8.59203556213602,4.11236791655476,3.65975040828328,4.32021363287205,6.48173717644853,6.76923947613151,4.18079473792944,5.95104881222419,11.5172614472973,7.90651337079936,5.59205381778233,2.81846469342095,3.73791365109947,2.31641886639937,3.50012139019286,2.97067593998782,2.02747350588934,2.46450201156083,4.4269490846943,4.08951443260272,1.93267296660805,3.74439008135225,7.2682557744481,3.64905387522296,4.93012594391171,5.1968329191118,4.47566739168704,7.74857283646933,7.93289966831794,7.38447635872886,6.76475214652589,6.55378537232999,7.15865914471568,5.84747284438514,7.5045236479457,7.71387554398355,6.57518112484113,5.10567692760349,6.9976808155391,6.88326927092722,9.27310051354514,4.50437941082837,5.67770035228522,5.14484109789758,10.5330141847426,10.1655331671072,16.1113832777512,8.59343270159095,9.28007184655913,15.0718154349541,9.06472676867641,11.4753825039407,10.8077088773813,17.2194115413998,16.0505696643064,3.32119512269365,3.99024873401031,4.78054096111576,3.16038732188782,3.5634237646757,7.16989682955055,4.66718128383392,3.7086310303001,2.56735367673452,5.55933865880354,4.81610669791456,6.60192194851267,5.71213195566283,5.95433917365284,6.4902079919843,4.28664322154766,4.51948871184936,7.33055037762079,5.76920261124629,7.65434384698866,2.40008476669791,6.03417740941747,7.15308569841963,3.92435324907287,4.79957840118186,5.24610568928394,4.93905526756486,4.73525480588117,5.70377278152619,1.68342681497322,6.64356101495375,6.89531376628944,5.72923460437565,6.19747364743864,4.62975866354739,6.99469618226249,7.25187986180766,2.57845264857958,6.12122662620299,4.85301122062934,3.94175320554716
|short_description=p2@Sh3glb2
|short_description=p2@Sh3glb2
}}
}}

Latest revision as of 13:01, 26 September 2015

Short description:p2@Sh3glb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sh3glb2_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 0bp_to_ENSMUST00000028214, ENSMUST00000113621, ENSMUST00000128387, ENSMUST00000151354_5end
EntrezGene:Sh3glb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sh3glb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I317.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.34
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.21
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H911.48
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I26.68
Ileum epithelium, pool1.CNhs13199.10252-104B95.13
Ileum epithelium, pool2.CNhs13232.10253-104C18.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.03
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.50
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C312.75
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C722.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D222.02
Mouse Microglia, donor1.CNhs12629.11718-123C816.78
Mouse Microglia, donor2.CNhs12634.11736-123E823.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.11
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.49
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E440.76
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D94.16
Mouse Schwann, donor2.CNhs12573.11746-123F94.69
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.71
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D78.02
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C15.17
adrenal gland, neonate N25.CNhs11223.1377-27I38.55
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H15.93
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B219.03
cerebellum, neonate N30.CNhs11135.1395-42I221.15
colon, adult.CNhs10468.36-18H78.43
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.45
corpora quadrigemina, adult.CNhs10501.16-22A419.77
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F112.57
cortex, adult.CNhs10473.12-14D515.12
cortex, neonate N30.CNhs11107.1392-42F217.39
diencephalon, adult.CNhs10482.20-12F219.32
diencephalon, neonate N30.CNhs11201.1388-42B218.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.56
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G48.00
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C66.26
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F57.27
heart, embryo E13.CNhs11013.376-3I97.02
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C85.90
heart, embryo E16.CNhs11021.457-17C66.63
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E37.24
heart, neonate N03.CNhs11221.1349-25I28.06
heart, neonate N10.CNhs11118.749-24G15.42
heart, neonate N16.CNhs11209.782-15G17.62
heart, neonate N20.CNhs11127.821-26I67.75
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D26.84
hippocampus, adult.CNhs10478.13-16E814.93
hippocampus, neonate N00.CNhs11228.627-43G17.92
intestinal mucosa, adult.CNhs10506.860-29I310.57
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F76.28
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F28.56
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E37.35
intestine, neonate N30.CNhs11131.1384-42G16.57
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G73.44
kidney, neonate N10.CNhs11206.758-6D55.25
kidney, neonate N20.CNhs11113.832-19I14.58
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H14.69
liver, adult pregnant day01.CNhs10466.508-5B25.34
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A44.10
lung, neonate N25.CNhs11119.1359-25C76.39
lung, neonate N30.CNhs11133.1394-42H25.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C223.44
medulla oblongata, neonate N30.CNhs11200.1396-42A320.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I74.83
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C77.37
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B95.14
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F56.42
pituitary gland, neonate N00.CNhs11190.1308-22E910.96
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C36.76
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H34.52
skin, neonate N06.CNhs11097.693-20I56.92
skin, neonate N10.CNhs11108.762-6C46.73
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C925.96
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.70
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A95.95
stomach, neonate N25.CNhs11104.1355-25E411.52
stomach, neonate N30.CNhs11134.1386-42I17.91
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D94.09
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B57.27
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I24.93
thymus, embryo E16.CNhs11002.456-26C55.20
thymus, embryo E17.CNhs10581.478-18C14.48
thymus, embryo E18.CNhs10595.1273-19G47.75
thymus, neonate N02.CNhs11181.1541-43F87.93
thymus, neonate N03.CNhs11137.2104-43C77.38
thymus, neonate N06.CNhs11197.681-26C46.76
thymus, neonate N07.CNhs11211.713-19D36.55
thymus, neonate N10.CNhs11194.748-24E47.16
thymus, neonate N20.CNhs11186.820-7A25.85
thymus, neonate N25.CNhs11125.1362-25G77.50
thymus, neonate N30.CNhs11132.1393-42G27.71
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.88
urinary bladder, adult.CNhs10481.879-12E49.27
uterus, adult pregnant day19.CNhs10497.590-15F54.50
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F810.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.05
whole body, embryo E11.CNhs11014.324-5I83.32
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F27.17
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.90
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.20
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C66.12
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.01e-1023
neuroblast (sensu Vertebrata)1.01e-1023
neural cell2.18e-0843
ectodermal cell2.19e-0844
neurectodermal cell2.19e-0844

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.41e-2254
central nervous system3.61e-2173
neural tube8.89e-2152
neural rod8.89e-2152
future spinal cord8.89e-2152
neural keel8.89e-2152
nervous system2.77e-2075
brain4.20e-1847
future brain4.20e-1847
regional part of brain1.18e-1746
ectoderm-derived structure1.55e-1795
ectoderm1.55e-1795
presumptive ectoderm1.55e-1795
neurectoderm3.36e-1664
neural plate3.36e-1664
presumptive neural plate3.36e-1664
structure with developmental contribution from neural crest6.57e-1692
ecto-epithelium1.60e-1573
gray matter3.73e-1534
anterior neural tube2.99e-1440
regional part of forebrain1.19e-1339
forebrain1.19e-1339
future forebrain1.19e-1339
brain grey matter6.91e-1329
regional part of telencephalon6.91e-1329
telencephalon6.91e-1329
pre-chordal neural plate6.63e-1249
cerebral cortex1.85e-0821
cerebral hemisphere1.85e-0821
pallium1.85e-0821
regional part of cerebral cortex4.73e-0817
posterior neural tube2.06e-0712
chordal neural plate2.06e-0712
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