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FFCP PHASE1:Mm9::chr3:107320829..107320904,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=229706
|EntrezGene=229706
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000169413_5end
|association_with_transcript=0bp_to_ENSMUST00000169413_5end
|cluster_id=chr3:107320829..107320904,-
|description=CAGE_peak_1_at_Slc6a17_5end
|description=CAGE_peak_1_at_Slc6a17_5end
|id=chr3:107320829..107320904,-
|id=chr3:107320829..107320904,-
|ontology_enrichment_celltype=CL:0000117!1.86e-12!23;CL:0000337!1.86e-12!23;CL:0000221!4.62e-10!44;CL:0000133!4.62e-10!44;CL:0002319!7.49e-10!43;CL:0000540!4.67e-09!33;CL:0000047!4.67e-09!33;CL:0000031!4.67e-09!33;CL:0000404!4.67e-09!33;CL:0000055!6.11e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,6.16e-13,23;CL:0000337,6.16e-13,23;CL:0000221,1.04e-09,44;CL:0000133,1.04e-09,44;CL:0002319,1.71e-09,43;CL:0000540,1.29e-08,33;CL:0000047,1.29e-08,33;CL:0000031,1.29e-08,33;CL:0000404,1.29e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.47e-29!63;UBERON:0000073!1.82e-28!75;UBERON:0001016!1.82e-28!75;UBERON:0001017!3.59e-28!73;UBERON:0005743!3.59e-28!73;UBERON:0001049!1.15e-27!52;UBERON:0005068!1.15e-27!52;UBERON:0006241!1.15e-27!52;UBERON:0007135!1.15e-27!52;UBERON:0000955!5.26e-27!50;UBERON:0006238!5.26e-27!50;UBERON:0002346!5.64e-27!71;UBERON:0003075!5.64e-27!71;UBERON:0007284!5.64e-27!71;UBERON:0004121!7.27e-27!102;UBERON:0000924!7.27e-27!102;UBERON:0006601!7.27e-27!102;UBERON:0002616!2.77e-26!49;UBERON:0003056!2.41e-25!49;UBERON:0003080!2.33e-22!40;UBERON:0002780!1.04e-21!39;UBERON:0001890!1.04e-21!39;UBERON:0006240!1.04e-21!39;UBERON:0002020!6.25e-20!34;UBERON:0002791!2.46e-17!29;UBERON:0003528!2.46e-17!29;UBERON:0001893!2.46e-17!29;UBERON:0000153!1.69e-13!94;UBERON:0000956!4.14e-13!21;UBERON:0001869!4.14e-13!21;UBERON:0000203!4.14e-13!21;UBERON:0007811!2.74e-12!86;UBERON:0002619!5.48e-11!17;UBERON:0000025!1.60e-08!114;UBERON:0002021!3.15e-08!10;UBERON:0000411!3.15e-08!10;UBERON:0001950!3.15e-08!10;UBERON:0004111!3.77e-08!122;UBERON:0000468!4.03e-08!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.20e-30,54;UBERON:0002346,2.68e-30,64;UBERON:0003075,2.68e-30,64;UBERON:0007284,2.68e-30,64;UBERON:0001049,8.09e-29,52;UBERON:0005068,8.09e-29,52;UBERON:0006241,8.09e-29,52;UBERON:0007135,8.09e-29,52;UBERON:0004121,1.05e-28,95;UBERON:0000924,1.05e-28,95;UBERON:0006601,1.05e-28,95;UBERON:0001016,1.30e-28,75;UBERON:0010371,2.28e-28,73;UBERON:0001017,2.67e-28,73;UBERON:0003056,2.15e-26,49;UBERON:0000955,5.92e-26,47;UBERON:0006238,5.92e-26,47;UBERON:0002616,3.25e-25,46;UBERON:0010314,5.20e-24,92;UBERON:0003080,2.82e-23,40;UBERON:0002780,1.34e-22,39;UBERON:0001890,1.34e-22,39;UBERON:0006240,1.34e-22,39;UBERON:0002020,9.68e-21,34;UBERON:0003528,4.96e-18,29;UBERON:0002791,4.96e-18,29;UBERON:0001893,4.96e-18,29;UBERON:0000956,1.28e-13,21;UBERON:0001869,1.28e-13,21;UBERON:0000203,1.28e-13,21;UBERON:0002619,2.11e-11,17;UBERON:0002021,1.60e-08,10;UBERON:0000411,1.60e-08,10;UBERON:0001950,1.60e-08,10;UBERON:0000025,8.57e-08,114;UBERON:0004111,2.62e-07,122
|phase1_expression=8.64803774365887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0056926673142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,1.31790010585369,2.0190142737785,2.34717403304412,1.96222640742402,6.81027166476863,8.1660557611199,2.51975558925653,7.18762821824858,0,0,0,0,0.573066879877513,0,13.7575193384526,16.9277113367051,10.775133859605,1.0165335962074,0,2.6996991518442,0,1.4209602298922,2.09720077362883,3.84218305321555,20.2194744001531,21.1959323180754,20.1911962897327,24.8516356431309,24.9581451275323,10.9016811301309,8.72193786265951,14.7075005857603,68.271846219621,96.7870022685723,83.254741024884,15.2988093767025,16.1018252740241,13.022834263919,66.4455537623287,54.587973173073,82.6638520472543,20.6240009831567,20.2167786734726,18.4535451367048,5.52801211332244,3.47629176491213,1.73918693221007,0,0,0,0,0,3.65155492342555,0,0,0,5.49289337129054,0,0,0,0.216491041011214,0.253359865475099,0,3.53970027129086,0,4.15637989381509,1.56136794089522,1.21786191324856,1.84492397804847,1.80867168663147,1.29347577849275,1.0053327306374,0.741584903203122,0.433798070759735,0,2.26473589926373,0.662524555381181,0.484875253135222,0,79.0508151931177,68.6985198348133,1.02182822083437,0,0.599902730993408,0,71.000763077886,65.4225862030636,30.4083532113132,112.811983804787,122.999134975889,76.8815764870372,83.5542504798952,2.95334155165917,1.61729061793121,7.07623723614289,7.78634866779954,6.11566081924707,6.66716102857071,7.02242306240862,5.87748789559289,7.34794190834341,6.66191345481219,7.49613796477831,19.1440494346872,2.15567992932842,5.10586416453112,7.9178005873777,7.23345917010997,8.34141747676794,7.66154766348766,5.35033554660653,3.78165106955137,0,0,0,4.55676699578104,3.98694301967864,3.96136535214233,7.81257627431194,6.09969118416952,6.01641740260775,4.88321283975857,5.90201483079162,4.43708300995244,5.43047504714485,0.492502392237286,0.648550476366846,0.438599962275997,0.878200461164203,0.402619256281115,90.845257779703,29.0191006909582,0,1.58670339998127,2.13288250535234,1.16118335930219,1.9330119198314,2.8235693447268,1.77902435075896,3.04361001780095,1.89811624617805,2.63518327558417,1.75934646160189,1.1937388322469,2.9244613067868,0.898819408654221,2.59365659849633,2.58883655230677,1.51734320762465,1.82797620175566,2.25415471346161,2.44381593414377,2.71533482034676,3.43665517462561,7.08249215791682,6.9376769550413,7.84993639206874,7.40382983530803,0,1.00107063429656,0.589676985339609,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.923765950833023,2.4633883530163,3.25929952884052,2.03694102930226,1.87752198630802,1.50755631697634,1.6663054862021,1.75620283072019,1.7339865851681,2.21464689648775,1.43509291791738,0.163863314715738,0.690739927463582,0.433947175744535,0,0,0,0,48.3257275863254,55.7927628178887,0,0.252470927204373,1.26203287766503,2.34263246577983,0.861693590931196,2.38968797952552,1.78238939265915,1.13230612315533,1.61924280669958,0.876767573733936,0.395287777946524,91.576575180215,1.84522110770749,5.69809931735217,2.93196526836437,5.1140738121486,0,2.6705869977048,2.11626489875326,1.88605079755898,1.47650946440386,2.45948118355142,3.35956781118687,1.45413491791002,0.712994756769443,3.47640433729398,1.05418608574999,0,37.7887962386705,4.50152735078276,7.1147276080515,7.71613326113732,8.33499098118686,13.5560301377574,10.2020392773315,31.0554248096891,0,0.21183207086382,0,1.15420377059036,4.35953952078945,3.92034012033013,3.22305328808468,2.1338316966858,1.1659233465194,32.4494278518392,0.170870880797853,1.857481811669,0.370389054739423,0.188368457004691,0,0.228778173206523,0.339956859987711,0.69975726161829,0.829199842826543,3.81868247206045,2.21435195506795,2.43983360552218,2.26811215725783,1.88179466413022,3.71216358368502,6.06889558731693,9.4224939526883,2.87931536182433,4.40690909192096,0,0,0.897099276263873,0.827292452285488,2.33341426012857,1.93739735216597,0.675824501963113,1.40828686374905,2.21347454234715,0.838874755405687,0,0.864090018773596,0,1.01362607645082,1.02710957164827,0.649604114888975,0.358053391334963,0,0.240390899039938,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,1.58711268530648,0.665957860122194,0.62799699626633,1.17519231454855,18.3530114330581,3.19060208267009,3.47988086107804,0.857473516316263,0.501572104035363,110.691361152945,109.097081052201,101.402505878773,130.264712216515,112.353533242385,118.596841890183,134.329477546129,120.686082464091,129.145586560498,145.490647602261,1.24544817101012,3.99024873401031,5.12200817262403,6.07766792670735,3.14419743941973,2.20612210140017,6.00066165064361,5.15087643097235,4.81378814387723,5.81203587056734,3.04175159868288,5.09291121742406,4.49479235855436,5.37811280200902,5.11175673704958,5.23923060411381,5.09891034157364,3.47236596834669,3.29668720642645,5.2991611248383,6.17164654293748,5.6792257970988,4.05341522910446,2.76158191601424,4.32903149910521,4.06150117880047,5.12198324043763,2.63069711437843,6.38279335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|phase1_expression=8.64803774365887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0056926673142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,1.31790010585369,2.0190142737785,2.34717403304412,1.96222640742402,6.81027166476863,8.1660557611199,2.51975558925653,7.18762821824858,0,0,0,0,0.573066879877513,0,13.7575193384526,16.9277113367051,10.775133859605,1.0165335962074,0,2.6996991518442,0,1.4209602298922,2.09720077362883,3.84218305321555,20.2194744001531,21.1959323180754,20.1911962897327,24.8516356431309,24.9581451275323,10.9016811301309,8.72193786265951,14.7075005857603,68.271846219621,96.7870022685723,83.254741024884,15.2988093767025,16.1018252740241,13.022834263919,66.4455537623287,54.587973173073,82.6638520472543,20.6240009831567,20.2167786734726,18.4535451367048,5.52801211332244,3.47629176491213,1.73918693221007,0,0,0,0,0,3.65155492342555,0,0,0,5.49289337129054,0,0,0,0.216491041011214,0.253359865475099,0,3.53970027129086,0,4.15637989381509,1.56136794089522,1.21786191324856,1.84492397804847,1.80867168663147,1.29347577849275,1.0053327306374,0.741584903203122,0.433798070759735,0,2.26473589926373,0.662524555381181,0.484875253135222,0,79.0508151931177,68.6985198348133,1.02182822083437,0,0.599902730993408,0,71.000763077886,65.4225862030636,30.4083532113132,112.811983804787,122.999134975889,76.8815764870372,83.5542504798952,2.95334155165917,1.61729061793121,7.07623723614289,7.78634866779954,6.11566081924707,6.66716102857071,7.02242306240862,5.87748789559289,7.34794190834341,6.66191345481219,7.49613796477831,19.1440494346872,2.15567992932842,5.10586416453112,7.9178005873777,7.23345917010997,8.34141747676794,7.66154766348766,5.35033554660653,3.78165106955137,0,0,0,4.55676699578104,3.98694301967864,3.96136535214233,7.81257627431194,6.09969118416952,6.01641740260775,4.88321283975857,5.90201483079162,4.43708300995244,5.43047504714485,0.492502392237286,0.648550476366846,0.438599962275997,0.878200461164203,0.402619256281115,90.845257779703,29.0191006909582,0,1.58670339998127,2.13288250535234,1.16118335930219,1.9330119198314,2.8235693447268,1.77902435075896,3.04361001780095,1.89811624617805,2.63518327558417,1.75934646160189,1.1937388322469,2.9244613067868,0.898819408654221,2.59365659849633,2.58883655230677,1.51734320762465,1.82797620175566,2.25415471346161,2.44381593414377,2.71533482034676,3.43665517462561,7.08249215791682,6.9376769550413,7.84993639206874,7.40382983530803,0,1.00107063429656,0.589676985339609,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.923765950833023,2.4633883530163,3.25929952884052,2.03694102930226,1.87752198630802,1.50755631697634,1.6663054862021,1.75620283072019,1.7339865851681,2.21464689648775,1.43509291791738,0.163863314715738,0.690739927463582,0.433947175744535,0,0,0,0,48.3257275863254,55.7927628178887,0,0.252470927204373,1.26203287766503,2.34263246577983,0.861693590931196,2.38968797952552,1.78238939265915,1.13230612315533,1.61924280669958,0.876767573733936,0.395287777946524,91.576575180215,1.84522110770749,5.69809931735217,2.93196526836437,5.1140738121486,0,2.6705869977048,2.11626489875326,1.88605079755898,1.47650946440386,2.45948118355142,3.35956781118687,1.45413491791002,0.712994756769443,3.47640433729398,1.05418608574999,0,37.7887962386705,4.50152735078276,7.1147276080515,7.71613326113732,8.33499098118686,13.5560301377574,10.2020392773315,31.0554248096891,0,0.21183207086382,0,1.15420377059036,4.35953952078945,3.92034012033013,3.22305328808468,2.1338316966858,1.1659233465194,32.4494278518392,0.170870880797853,1.857481811669,0.370389054739423,0.188368457004691,0,0.228778173206523,0.339956859987711,0.69975726161829,0.829199842826543,3.81868247206045,2.21435195506795,2.43983360552218,2.26811215725783,1.88179466413022,3.71216358368502,6.06889558731693,9.4224939526883,2.87931536182433,4.40690909192096,0,0,0.897099276263873,0.827292452285488,2.33341426012857,1.93739735216597,0.675824501963113,1.40828686374905,2.21347454234715,0.838874755405687,0,0.864090018773596,0,1.01362607645082,1.02710957164827,0.649604114888975,0.358053391334963,0,0.240390899039938,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,1.58711268530648,0.665957860122194,0.62799699626633,1.17519231454855,18.3530114330581,3.19060208267009,3.47988086107804,0.857473516316263,0.501572104035363,110.691361152945,109.097081052201,101.402505878773,130.264712216515,112.353533242385,118.596841890183,134.329477546129,120.686082464091,129.145586560498,145.490647602261,1.24544817101012,3.99024873401031,5.12200817262403,6.07766792670735,3.14419743941973,2.20612210140017,6.00066165064361,5.15087643097235,4.81378814387723,5.81203587056734,3.04175159868288,5.09291121742406,4.49479235855436,5.37811280200902,5.11175673704958,5.23923060411381,5.09891034157364,3.47236596834669,3.29668720642645,5.2991611248383,6.17164654293748,5.6792257970988,4.05341522910446,2.76158191601424,4.32903149910521,4.06150117880047,5.12198324043763,2.63069711437843,6.38279335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|short_description=p1@Slc6a17
|short_description=p1@Slc6a17
}}
}}

Latest revision as of 07:05, 27 September 2015

Short description:p1@Slc6a17
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc6a17_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000169413_5end
EntrezGene:Slc6a17
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slc6a17

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.76
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.20
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.19
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D368.27
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F396.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D783.25
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E466.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E554.59
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I682.66
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.45
Mouse Schwann, donor1.CNhs12507.11728-123D95.53
Mouse Schwann, donor2.CNhs12573.11746-123F93.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.16
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B279.05
cerebellum, neonate N30.CNhs11135.1395-42I268.70
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A471.00
corpus striatum, adult.CNhs10487.19-21D865.42
corpus striatum, neonate N00.CNhs11226.630-43F130.41
cortex, adult.CNhs10473.12-14D5112.81
cortex, neonate N30.CNhs11107.1392-42F2123.00
diencephalon, adult.CNhs10482.20-12F276.88
diencephalon, neonate N30.CNhs11201.1388-42B283.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C66.12
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C97.02
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C67.35
eyeball, neonate N01.CNhs11140.1532-43E76.66
eyeball, neonate N02.CNhs11205.1551-44G87.50
eyeball, neonate N16.CNhs11188.777-19A219.14
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H25.11
forelimb, embryo E13.CNhs10589.384-1E27.92
forelimb, embryo E14.CNhs10577.413-26A87.23
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D47.81
heart, embryo E15.CNhs11017.431-16C86.10
heart, embryo E16.CNhs11021.457-17C66.02
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E34.44
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E890.85
hippocampus, neonate N00.CNhs11228.627-43G129.02
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G73.44
kidney, neonate N10.CNhs11206.758-6D57.08
kidney, neonate N20.CNhs11113.832-19I16.94
kidney, neonate N25.CNhs11122.1353-25F37.85
kidney, neonate N30.CNhs11203.1385-42H17.40
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C248.33
medulla oblongata, neonate N30.CNhs11200.1396-42A355.79
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I991.58
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H75.70
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G837.79
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C77.11
pituitary gland, embryo E14.CNhs11037.398-44A57.72
pituitary gland, embryo E15.CNhs10592.427-16B98.33
pituitary gland, embryo E16.CNhs11036.449-43F613.56
pituitary gland, embryo E17.CNhs11039.1265-44F510.20
pituitary gland, neonate N00.CNhs11190.1308-22E931.06
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H33.92
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C932.45
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B86.07
stomach, neonate N07.CNhs11210.718-18A99.42
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I14.41
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E418.35
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1110.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2109.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3101.40
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7130.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4112.35
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5118.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6134.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7120.69
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8129.15
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9145.49
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.38
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.16e-1323
neuroblast (sensu Vertebrata)6.16e-1323
ectodermal cell1.04e-0944
neurectodermal cell1.04e-0944
neural cell1.71e-0943
neuron1.29e-0833
neuronal stem cell1.29e-0833
neuroblast1.29e-0833
electrically signaling cell1.29e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.20e-3054
neurectoderm2.68e-3064
neural plate2.68e-3064
presumptive neural plate2.68e-3064
neural tube8.09e-2952
neural rod8.09e-2952
future spinal cord8.09e-2952
neural keel8.09e-2952
ectoderm-derived structure1.05e-2895
ectoderm1.05e-2895
presumptive ectoderm1.05e-2895
nervous system1.30e-2875
ecto-epithelium2.28e-2873
central nervous system2.67e-2873
pre-chordal neural plate2.15e-2649
brain5.92e-2647
future brain5.92e-2647
regional part of brain3.25e-2546
structure with developmental contribution from neural crest5.20e-2492
anterior neural tube2.82e-2340
regional part of forebrain1.34e-2239
forebrain1.34e-2239
future forebrain1.34e-2239
gray matter9.68e-2134
brain grey matter4.96e-1829
regional part of telencephalon4.96e-1829
telencephalon4.96e-1829
cerebral cortex1.28e-1321
cerebral hemisphere1.28e-1321
pallium1.28e-1321
regional part of cerebral cortex2.11e-1117
occipital lobe1.60e-0810
visual cortex1.60e-0810
neocortex1.60e-0810
tube8.57e-08114
anatomical conduit2.62e-07122
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