FFCP PHASE1:Mm9::chr12:70397663..70397785,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69554 | |EntrezGene=69554 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q4G5Y1,Q8BKM6 | |UniProt=Q4G5Y1,Q8BKM6 | ||
|association_with_transcript=0bp_to_ENSMUST00000021362,ENSMUST00000138585,ENSMUST00000151571,NM_027117,uc007nry.2,uc007nrz.2,uc007nsa.2_5end | |association_with_transcript=0bp_to_ENSMUST00000021362,ENSMUST00000138585,ENSMUST00000151571,NM_027117,uc007nry.2,uc007nrz.2,uc007nsa.2_5end | ||
|cluster_id=chr12:70397663..70397785,+ | |||
|description=CAGE_peak_1_at_Klhdc2_5end | |description=CAGE_peak_1_at_Klhdc2_5end | ||
|id=chr12:70397663..70397785,+ | |id=chr12:70397663..70397785,+ | ||
|ontology_enrichment_celltype=CL:0000540!6.94e-17!33;CL:0000047!6.94e-17!33;CL:0000031!6.94e-17!33;CL:0000404!6.94e-17!33;CL:0000117!3.06e-15!23;CL:0000337!3.06e-15!23;CL:0000393!1.83e-13!39;CL:0000211!1.83e-13!39;CL:0000221!5.02e-12!44;CL:0000133!5.02e-12!44;CL:0002319!8.59e-12!43;CL:0000055!2.81e-09!50 | |ontology_enrichment_celltype=CL:0000540!6.94e-17!33;CL:0000047!6.94e-17!33;CL:0000031!6.94e-17!33;CL:0000404!6.94e-17!33;CL:0000117!3.06e-15!23;CL:0000337!3.06e-15!23;CL:0000393!1.83e-13!39;CL:0000211!1.83e-13!39;CL:0000221!5.02e-12!44;CL:0000133!5.02e-12!44;CL:0002319!8.59e-12!43;CL:0000055!2.81e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.94e-17,33;CL:0000047,6.94e-17,33;CL:0000031,6.94e-17,33;CL:0000404,6.94e-17,33;CL:0000117,3.06e-15,23;CL:0000337,3.06e-15,23;CL:0000393,1.83e-13,39;CL:0000211,1.83e-13,39;CL:0000221,5.02e-12,44;CL:0000133,5.02e-12,44;CL:0002319,8.59e-12,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.09e-26!75;UBERON:0001016!3.09e-26!75;UBERON:0001017!1.06e-25!73;UBERON:0005743!1.06e-25!73;UBERON:0002346!2.09e-22!71;UBERON:0003075!2.09e-22!71;UBERON:0007284!2.09e-22!71;UBERON:0000033!2.39e-22!63;UBERON:0004121!7.42e-22!102;UBERON:0000924!7.42e-22!102;UBERON:0006601!7.42e-22!102;UBERON:0001049!1.12e-21!52;UBERON:0005068!1.12e-21!52;UBERON:0006241!1.12e-21!52;UBERON:0007135!1.12e-21!52;UBERON:0000955!2.38e-20!50;UBERON:0006238!2.38e-20!50;UBERON:0002616!6.62e-20!49;UBERON:0003056!5.62e-19!49;UBERON:0003080!1.41e-17!40;UBERON:0002780!5.74e-17!39;UBERON:0001890!5.74e-17!39;UBERON:0006240!5.74e-17!39;UBERON:0002020!1.59e-16!34;UBERON:0000025!6.69e-15!114;UBERON:0004111!2.22e-14!122;UBERON:0002791!9.04e-14!29;UBERON:0003528!9.04e-14!29;UBERON:0001893!9.04e-14!29;UBERON:0000956!5.34e-10!21;UBERON:0001869!5.34e-10!21;UBERON:0000203!5.34e-10!21;UBERON:0002619!1.19e-07!17 | |ontology_enrichment_uberon=UBERON:0000073!3.09e-26!75;UBERON:0001016!3.09e-26!75;UBERON:0001017!1.06e-25!73;UBERON:0005743!1.06e-25!73;UBERON:0002346!2.09e-22!71;UBERON:0003075!2.09e-22!71;UBERON:0007284!2.09e-22!71;UBERON:0000033!2.39e-22!63;UBERON:0004121!7.42e-22!102;UBERON:0000924!7.42e-22!102;UBERON:0006601!7.42e-22!102;UBERON:0001049!1.12e-21!52;UBERON:0005068!1.12e-21!52;UBERON:0006241!1.12e-21!52;UBERON:0007135!1.12e-21!52;UBERON:0000955!2.38e-20!50;UBERON:0006238!2.38e-20!50;UBERON:0002616!6.62e-20!49;UBERON:0003056!5.62e-19!49;UBERON:0003080!1.41e-17!40;UBERON:0002780!5.74e-17!39;UBERON:0001890!5.74e-17!39;UBERON:0006240!5.74e-17!39;UBERON:0002020!1.59e-16!34;UBERON:0000025!6.69e-15!114;UBERON:0004111!2.22e-14!122;UBERON:0002791!9.04e-14!29;UBERON:0003528!9.04e-14!29;UBERON:0001893!9.04e-14!29;UBERON:0000956!5.34e-10!21;UBERON:0001869!5.34e-10!21;UBERON:0000203!5.34e-10!21;UBERON:0002619!1.19e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.96e-28,92;UBERON:0001016,3.09e-26,75;UBERON:0001017,1.06e-25,73;UBERON:0002346,2.43e-24,64;UBERON:0003075,2.43e-24,64;UBERON:0007284,2.43e-24,64;UBERON:0004121,5.71e-23,95;UBERON:0000924,5.71e-23,95;UBERON:0006601,5.71e-23,95;UBERON:0000073,7.55e-23,54;UBERON:0001049,1.12e-21,52;UBERON:0005068,1.12e-21,52;UBERON:0006241,1.12e-21,52;UBERON:0007135,1.12e-21,52;UBERON:0010371,4.04e-19,73;UBERON:0003056,5.62e-19,49;UBERON:0000955,1.48e-18,47;UBERON:0006238,1.48e-18,47;UBERON:0002616,4.03e-18,46;UBERON:0003080,1.41e-17,40;UBERON:0002780,5.74e-17,39;UBERON:0001890,5.74e-17,39;UBERON:0006240,5.74e-17,39;UBERON:0002020,1.59e-16,34;UBERON:0000025,6.69e-15,114;UBERON:0004111,2.22e-14,122;UBERON:0003528,9.04e-14,29;UBERON:0002791,9.04e-14,29;UBERON:0001893,9.04e-14,29;UBERON:0000956,5.34e-10,21;UBERON:0001869,5.34e-10,21;UBERON:0000203,5.34e-10,21;UBERON:0002619,1.19e-07,17 | |||
|phase1_expression=76.0707023747771,17.7977457896074,20.0199665331396,14.215817931421,12.5223932486587,25.0140115148716,23.5948767001481,31.1187209494199,9.714421828465,14.7460651582856,7.87602653837323,9.73220339743104,37.1505583950716,52.1025598417225,53.297561890506,55.883173799592,81.8487397409932,19.2431920868525,20.1558217400436,16.1268067683251,44.9879004899159,106.439899687349,110.48751080577,25.5987876469451,32.8055271926053,19.5238867799107,16.7997178502039,20.4697671051595,19.7624356234629,18.146169342715,17.5167103417691,40.0069324279568,33.2134985295668,0,39.5726719059246,39.3976109499627,43.8964115964094,37.2493151355848,35.9414258480948,24.6056159667685,47.6467505305122,42.3488200674236,33.5002143591496,32.4813790376989,36.5970721702448,39.0954582104382,30.5132624295735,43.8230564324697,49.8687634807251,41.8024283009709,39.1961980551015,35.9381410912429,16.9460432118314,36.2681071005672,58.4803210507887,46.8212173585423,57.3066879877513,51.0515371354668,174.801422182692,164.516194553602,150.218042630964,38.6282766558811,33.7932022522233,17.997994345628,16.8107281636386,17.7620028736525,36.251613372727,36.8849573108692,127.330843914811,119.075237608551,121.77815262245,111.11823293308,92.9856557406293,114.528897265982,118.656693120577,102.033285313712,88.092704799511,118.238475066884,121.656374338945,167.627471705076,156.077919985711,160.962231502039,126.749081546627,109.175946346146,109.403545408196,92.5133758387317,95.2466544545999,149.492355551891,68.6079311598647,67.4854031753595,47.2479116583735,38.7190744641624,52.3577926954968,37.7792234146472,45.4843492213368,40.3224198387602,45.6444365428194,39.7102651606875,42.3451187502676,44.8741259628132,68.7315888510201,10.2661181931454,12.7402619853323,21.3320010945999,37.8859321769625,47.6316547093185,42.9695778262566,41.4487483380188,16.0541487861246,46.1655052491605,60.7198643681475,45.9742872251333,50.9660248935889,42.8052299169448,51.386265018303,45.6169726526722,54.877282837031,39.331025082216,35.384422077995,63.5743720293318,71.7734934996279,54.7909036042801,14.9113408974498,75.8302264259907,88.8054036889049,22.2247638031475,48.7647556739095,35.9941638596045,43.7121581131343,112.342979553617,52.1550687213234,73.2564872817999,99.2536868297899,117.884825829282,114.491212552318,84.365456795234,69.6581248736163,47.5234627730555,47.0064330686635,36.8273247801329,65.3204623672773,86.6730933714193,80.4877720229911,76.4073426427075,91.9853468525953,73.6653891637886,93.2332159369302,47.3427168452399,73.5086855900992,59.5684152528631,57.5360176016113,53.9221501771834,42.8192763807421,42.8350164822265,31.2788847340074,63.6909653819178,28.7907406798426,28.5656176897334,41.2037074123609,73.9439007951742,67.7780313345368,60.860976773823,63.2108444012511,61.5872045369374,66.6433927673474,70.9228531488744,72.7020917792968,86.4063533517054,76.5203302097684,75.6812009404629,87.3111078808866,85.6731926312447,74.4274890836662,78.5107549748175,89.5835180883182,109.2846983468,14.8688452342709,18.2470890997846,67.1857989185987,59.4525879962723,44.9747440014106,38.7232367276818,41.8070722428356,42.9909915014384,29.8953308773042,46.4451052321711,51.0210473864547,39.1944249921067,44.4518118631594,27.8634016682809,21.18152888772,27.4814957091027,90.8509245565261,58.3809899435714,51.845558409617,53.3566478954723,52.9490289967618,55.8281126326936,47.68034899169,45.6115357256971,41.1336666944402,52.3203975028434,40.0211046567651,56.8941810491881,59.5573755193005,60.4879082315257,80.5354681912357,55.7119239028083,62.8925853900107,53.2237854284,70.0424179668153,45.5771945892215,47.443508154027,48.0061822492369,43.6852742360385,44.7064613966388,44.4905585534342,52.1039003072437,28.4519912856571,72.7647021198661,53.1265823201004,42.0967812722467,38.9585812158913,34.3387827755722,41.1815498732804,55.0276886958993,43.3496646292025,41.6353616539697,44.6473352240964,30.4785765371273,34.5369963731791,34.2818268838182,16.5870412333199,15.7732648307426,34.4234991113325,30.0771053472158,126.032213140417,117.56332165198,75.246139927894,111.592149824333,82.0321370482267,64.0319540646487,77.5524231838076,59.742199488138,66.8396022247182,64.8245255506426,68.0081978813822,64.8808004563112,74.7093900318929,83.8648635860916,48.2596289708113,63.9255517165446,60.4310619201767,37.283247791793,43.8058956521877,58.9956945856605,47.7671220004307,43.1905632641007,38.3892460745005,39.9665692327106,48.0676625292891,53.4394582331933,50.2661303522457,44.8772196268859,37.9506990869996,43.3169281642385,68.4283607565114,72.9247430826806,79.6849492101768,78.0186807514996,67.7439692513485,73.4879528520531,76.0216475181799,70.3314032454724,41.0675489111493,49.1450404404063,45.6493783973771,26.2169142176953,39.235855687105,31.8452243620663,26.1425433366869,23.8004304630339,27.399198643206,118.857618588737,37.4207228947297,50.977556386916,42.0391577129245,57.8291163004401,52.4905834448737,49.4160854126089,40.9648016285191,37.9268435797113,40.6307922985006,21.9574242143476,63.5835347098082,39.6472960897355,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|phase1_expression=76.0707023747771,17.7977457896074,20.0199665331396,14.215817931421,12.5223932486587,25.0140115148716,23.5948767001481,31.1187209494199,9.714421828465,14.7460651582856,7.87602653837323,9.73220339743104,37.1505583950716,52.1025598417225,53.297561890506,55.883173799592,81.8487397409932,19.2431920868525,20.1558217400436,16.1268067683251,44.9879004899159,106.439899687349,110.48751080577,25.5987876469451,32.8055271926053,19.5238867799107,16.7997178502039,20.4697671051595,19.7624356234629,18.146169342715,17.5167103417691,40.0069324279568,33.2134985295668,0,39.5726719059246,39.3976109499627,43.8964115964094,37.2493151355848,35.9414258480948,24.6056159667685,47.6467505305122,42.3488200674236,33.5002143591496,32.4813790376989,36.5970721702448,39.0954582104382,30.5132624295735,43.8230564324697,49.8687634807251,41.8024283009709,39.1961980551015,35.9381410912429,16.9460432118314,36.2681071005672,58.4803210507887,46.8212173585423,57.3066879877513,51.0515371354668,174.801422182692,164.516194553602,150.218042630964,38.6282766558811,33.7932022522233,17.997994345628,16.8107281636386,17.7620028736525,36.251613372727,36.8849573108692,127.330843914811,119.075237608551,121.77815262245,111.11823293308,92.9856557406293,114.528897265982,118.656693120577,102.033285313712,88.092704799511,118.238475066884,121.656374338945,167.627471705076,156.077919985711,160.962231502039,126.749081546627,109.175946346146,109.403545408196,92.5133758387317,95.2466544545999,149.492355551891,68.6079311598647,67.4854031753595,47.2479116583735,38.7190744641624,52.3577926954968,37.7792234146472,45.4843492213368,40.3224198387602,45.6444365428194,39.7102651606875,42.3451187502676,44.8741259628132,68.7315888510201,10.2661181931454,12.7402619853323,21.3320010945999,37.8859321769625,47.6316547093185,42.9695778262566,41.4487483380188,16.0541487861246,46.1655052491605,60.7198643681475,45.9742872251333,50.9660248935889,42.8052299169448,51.386265018303,45.6169726526722,54.877282837031,39.331025082216,35.384422077995,63.5743720293318,71.7734934996279,54.7909036042801,14.9113408974498,75.8302264259907,88.8054036889049,22.2247638031475,48.7647556739095,35.9941638596045,43.7121581131343,112.342979553617,52.1550687213234,73.2564872817999,99.2536868297899,117.884825829282,114.491212552318,84.365456795234,69.6581248736163,47.5234627730555,47.0064330686635,36.8273247801329,65.3204623672773,86.6730933714193,80.4877720229911,76.4073426427075,91.9853468525953,73.6653891637886,93.2332159369302,47.3427168452399,73.5086855900992,59.5684152528631,57.5360176016113,53.9221501771834,42.8192763807421,42.8350164822265,31.2788847340074,63.6909653819178,28.7907406798426,28.5656176897334,41.2037074123609,73.9439007951742,67.7780313345368,60.860976773823,63.2108444012511,61.5872045369374,66.6433927673474,70.9228531488744,72.7020917792968,86.4063533517054,76.5203302097684,75.6812009404629,87.3111078808866,85.6731926312447,74.4274890836662,78.5107549748175,89.5835180883182,109.2846983468,14.8688452342709,18.2470890997846,67.1857989185987,59.4525879962723,44.9747440014106,38.7232367276818,41.8070722428356,42.9909915014384,29.8953308773042,46.4451052321711,51.0210473864547,39.1944249921067,44.4518118631594,27.8634016682809,21.18152888772,27.4814957091027,90.8509245565261,58.3809899435714,51.845558409617,53.3566478954723,52.9490289967618,55.8281126326936,47.68034899169,45.6115357256971,41.1336666944402,52.3203975028434,40.0211046567651,56.8941810491881,59.5573755193005,60.4879082315257,80.5354681912357,55.7119239028083,62.8925853900107,53.2237854284,70.0424179668153,45.5771945892215,47.443508154027,48.0061822492369,43.6852742360385,44.7064613966388,44.4905585534342,52.1039003072437,28.4519912856571,72.7647021198661,53.1265823201004,42.0967812722467,38.9585812158913,34.3387827755722,41.1815498732804,55.0276886958993,43.3496646292025,41.6353616539697,44.6473352240964,30.4785765371273,34.5369963731791,34.2818268838182,16.5870412333199,15.7732648307426,34.4234991113325,30.0771053472158,126.032213140417,117.56332165198,75.246139927894,111.592149824333,82.0321370482267,64.0319540646487,77.5524231838076,59.742199488138,66.8396022247182,64.8245255506426,68.0081978813822,64.8808004563112,74.7093900318929,83.8648635860916,48.2596289708113,63.9255517165446,60.4310619201767,37.283247791793,43.8058956521877,58.9956945856605,47.7671220004307,43.1905632641007,38.3892460745005,39.9665692327106,48.0676625292891,53.4394582331933,50.2661303522457,44.8772196268859,37.9506990869996,43.3169281642385,68.4283607565114,72.9247430826806,79.6849492101768,78.0186807514996,67.7439692513485,73.4879528520531,76.0216475181799,70.3314032454724,41.0675489111493,49.1450404404063,45.6493783973771,26.2169142176953,39.235855687105,31.8452243620663,26.1425433366869,23.8004304630339,27.399198643206,118.857618588737,37.4207228947297,50.977556386916,42.0391577129245,57.8291163004401,52.4905834448737,49.4160854126089,40.9648016285191,37.9268435797113,40.6307922985006,21.9574242143476,63.5835347098082,39.6472960897355,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| ||
|short_description=p1@Klhdc2 | |short_description=p1@Klhdc2 | ||
}} | }} |
Latest revision as of 17:30, 26 September 2015
Short description: | p1@Klhdc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Klhdc2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000021362, ENSMUST00000138585, ENSMUST00000151571, NM_027117, uc007nry.2, uc007nrz.2, uc007nsa.2_5end |
EntrezGene: | Klhdc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.94e-17 | 33 |
neuronal stem cell | 6.94e-17 | 33 |
neuroblast | 6.94e-17 | 33 |
electrically signaling cell | 6.94e-17 | 33 |
CNS neuron (sensu Vertebrata) | 3.06e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.06e-15 | 23 |
electrically responsive cell | 1.83e-13 | 39 |
electrically active cell | 1.83e-13 | 39 |
ectodermal cell | 5.02e-12 | 44 |
neurectodermal cell | 5.02e-12 | 44 |
neural cell | 8.59e-12 | 43 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.96e-28 | 92 |
nervous system | 3.09e-26 | 75 |
central nervous system | 1.06e-25 | 73 |
neurectoderm | 2.43e-24 | 64 |
neural plate | 2.43e-24 | 64 |
presumptive neural plate | 2.43e-24 | 64 |
ectoderm-derived structure | 5.71e-23 | 95 |
ectoderm | 5.71e-23 | 95 |
presumptive ectoderm | 5.71e-23 | 95 |
regional part of nervous system | 7.55e-23 | 54 |
neural tube | 1.12e-21 | 52 |
neural rod | 1.12e-21 | 52 |
future spinal cord | 1.12e-21 | 52 |
neural keel | 1.12e-21 | 52 |
ecto-epithelium | 4.04e-19 | 73 |
pre-chordal neural plate | 5.62e-19 | 49 |
brain | 1.48e-18 | 47 |
future brain | 1.48e-18 | 47 |
regional part of brain | 4.03e-18 | 46 |
anterior neural tube | 1.41e-17 | 40 |
regional part of forebrain | 5.74e-17 | 39 |
forebrain | 5.74e-17 | 39 |
future forebrain | 5.74e-17 | 39 |
gray matter | 1.59e-16 | 34 |
tube | 6.69e-15 | 114 |
anatomical conduit | 2.22e-14 | 122 |
brain grey matter | 9.04e-14 | 29 |
regional part of telencephalon | 9.04e-14 | 29 |
telencephalon | 9.04e-14 | 29 |
cerebral cortex | 5.34e-10 | 21 |
cerebral hemisphere | 5.34e-10 | 21 |
pallium | 5.34e-10 | 21 |
regional part of cerebral cortex | 1.19e-07 | 17 |