FFCP PHASE1:Mm9::chr15:75840293..75840323,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=572 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TYL0 | |UniProt=Q3TYL0 | ||
|association_with_transcript=0bp_to_uc007wie.1_5end | |association_with_transcript=0bp_to_uc007wie.1_5end | ||
|cluster_id=chr15:75840293..75840323,+ | |||
|description=CAGE_peak_1_at_uc007wie.1_5end | |description=CAGE_peak_1_at_uc007wie.1_5end | ||
|id=chr15:75840293..75840323,+ | |id=chr15:75840293..75840323,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.41e-12!50;CL:0000221!3.16e-11!44;CL:0000133!3.16e-11!44;CL:0002319!4.57e-11!43;CL:0000393!5.16e-11!39;CL:0000211!5.16e-11!39;CL:0000540!1.16e-09!33;CL:0000047!1.16e-09!33;CL:0000031!1.16e-09!33;CL:0000404!1.16e-09!33;CL:0000117!1.17e-08!23;CL:0000337!1.17e-08!23 | |ontology_enrichment_celltype=CL:0000055!9.41e-12!50;CL:0000221!3.16e-11!44;CL:0000133!3.16e-11!44;CL:0002319!4.57e-11!43;CL:0000393!5.16e-11!39;CL:0000211!5.16e-11!39;CL:0000540!1.16e-09!33;CL:0000047!1.16e-09!33;CL:0000031!1.16e-09!33;CL:0000404!1.16e-09!33;CL:0000117!1.17e-08!23;CL:0000337!1.17e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.09e-11,43;CL:0000221,5.32e-11,44;CL:0000133,5.32e-11,44;CL:0000117,2.61e-10,23;CL:0000337,2.61e-10,23;CL:0000540,2.84e-09,33;CL:0000047,2.84e-09,33;CL:0000031,2.84e-09,33;CL:0000404,2.84e-09,33;CL:0000393,3.41e-09,39;CL:0000211,3.41e-09,39;CL:0002321,9.64e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.19e-18!102;UBERON:0000924!2.19e-18!102;UBERON:0006601!2.19e-18!102;UBERON:0001017!6.45e-18!73;UBERON:0005743!6.45e-18!73;UBERON:0000073!7.48e-18!75;UBERON:0001016!7.48e-18!75;UBERON:0002346!1.12e-16!71;UBERON:0003075!1.12e-16!71;UBERON:0007284!1.12e-16!71;UBERON:0000033!1.35e-16!63;UBERON:0001049!1.75e-13!52;UBERON:0005068!1.75e-13!52;UBERON:0006241!1.75e-13!52;UBERON:0007135!1.75e-13!52;UBERON:0003056!2.67e-13!49;UBERON:0000955!4.20e-13!50;UBERON:0006238!4.20e-13!50;UBERON:0002616!5.51e-13!49;UBERON:0003080!1.44e-09!40;UBERON:0002780!1.74e-09!39;UBERON:0001890!1.74e-09!39;UBERON:0006240!1.74e-09!39;UBERON:0007811!1.99e-08!86;UBERON:0002020!1.01e-07!34;UBERON:0000153!1.95e-07!94 | |ontology_enrichment_uberon=UBERON:0004121!2.19e-18!102;UBERON:0000924!2.19e-18!102;UBERON:0006601!2.19e-18!102;UBERON:0001017!6.45e-18!73;UBERON:0005743!6.45e-18!73;UBERON:0000073!7.48e-18!75;UBERON:0001016!7.48e-18!75;UBERON:0002346!1.12e-16!71;UBERON:0003075!1.12e-16!71;UBERON:0007284!1.12e-16!71;UBERON:0000033!1.35e-16!63;UBERON:0001049!1.75e-13!52;UBERON:0005068!1.75e-13!52;UBERON:0006241!1.75e-13!52;UBERON:0007135!1.75e-13!52;UBERON:0003056!2.67e-13!49;UBERON:0000955!4.20e-13!50;UBERON:0006238!4.20e-13!50;UBERON:0002616!5.51e-13!49;UBERON:0003080!1.44e-09!40;UBERON:0002780!1.74e-09!39;UBERON:0001890!1.74e-09!39;UBERON:0006240!1.74e-09!39;UBERON:0007811!1.99e-08!86;UBERON:0002020!1.01e-07!34;UBERON:0000153!1.95e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.89e-17,73;UBERON:0004121,2.13e-17,95;UBERON:0000924,2.13e-17,95;UBERON:0006601,2.13e-17,95;UBERON:0002346,2.75e-17,64;UBERON:0003075,2.75e-17,64;UBERON:0007284,2.75e-17,64;UBERON:0001016,1.07e-16,75;UBERON:0000073,7.32e-16,54;UBERON:0003056,3.55e-15,49;UBERON:0010371,4.99e-15,73;UBERON:0001049,3.53e-14,52;UBERON:0005068,3.53e-14,52;UBERON:0006241,3.53e-14,52;UBERON:0007135,3.53e-14,52;UBERON:0002616,5.02e-13,46;UBERON:0000955,1.35e-12,47;UBERON:0006238,1.35e-12,47;UBERON:0010314,1.37e-12,92;UBERON:0002780,2.25e-11,39;UBERON:0001890,2.25e-11,39;UBERON:0006240,2.25e-11,39;UBERON:0003080,6.13e-11,40;UBERON:0002020,1.73e-08,34;UBERON:0003528,2.98e-08,29;UBERON:0002791,2.98e-08,29;UBERON:0001893,2.98e-08,29;UBERON:0002420,9.16e-08,8;UBERON:0007245,9.16e-08,8;UBERON:0010009,9.16e-08,8;UBERON:0010011,9.16e-08,8;UBERON:0000454,9.16e-08,8 | |||
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| ||
|short_description=p1@uc007wie.1 | |short_description=p1@uc007wie.1 | ||
}} | }} |
Latest revision as of 00:05, 27 September 2015
Short description: | p1@uc007wie.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007wie.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:572 |
Association with transcript: | 0bp_to_uc007wie.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.09e-11 | 43 |
ectodermal cell | 5.32e-11 | 44 |
neurectodermal cell | 5.32e-11 | 44 |
CNS neuron (sensu Vertebrata) | 2.61e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.61e-10 | 23 |
neuron | 2.84e-09 | 33 |
neuronal stem cell | 2.84e-09 | 33 |
neuroblast | 2.84e-09 | 33 |
electrically signaling cell | 2.84e-09 | 33 |
electrically responsive cell | 3.41e-09 | 39 |
electrically active cell | 3.41e-09 | 39 |
embryonic cell | 9.64e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.89e-17 | 73 |
ectoderm-derived structure | 2.13e-17 | 95 |
ectoderm | 2.13e-17 | 95 |
presumptive ectoderm | 2.13e-17 | 95 |
neurectoderm | 2.75e-17 | 64 |
neural plate | 2.75e-17 | 64 |
presumptive neural plate | 2.75e-17 | 64 |
nervous system | 1.07e-16 | 75 |
regional part of nervous system | 7.32e-16 | 54 |
pre-chordal neural plate | 3.55e-15 | 49 |
ecto-epithelium | 4.99e-15 | 73 |
neural tube | 3.53e-14 | 52 |
neural rod | 3.53e-14 | 52 |
future spinal cord | 3.53e-14 | 52 |
neural keel | 3.53e-14 | 52 |
regional part of brain | 5.02e-13 | 46 |
brain | 1.35e-12 | 47 |
future brain | 1.35e-12 | 47 |
structure with developmental contribution from neural crest | 1.37e-12 | 92 |
regional part of forebrain | 2.25e-11 | 39 |
forebrain | 2.25e-11 | 39 |
future forebrain | 2.25e-11 | 39 |
anterior neural tube | 6.13e-11 | 40 |
gray matter | 1.73e-08 | 34 |
brain grey matter | 2.98e-08 | 29 |
regional part of telencephalon | 2.98e-08 | 29 |
telencephalon | 2.98e-08 | 29 |
basal ganglion | 9.16e-08 | 8 |
nuclear complex of neuraxis | 9.16e-08 | 8 |
aggregate regional part of brain | 9.16e-08 | 8 |
collection of basal ganglia | 9.16e-08 | 8 |
cerebral subcortex | 9.16e-08 | 8 |