FFCP PHASE1:Mm9::chr5:67359660..67359686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77569 | |EntrezGene=77569 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1027 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UH68,D3YV55 | |UniProt=Q3UH68,D3YV55 | ||
|association_with_transcript=5bp_to_ENSMUST00000038188,uc008xpi.1,uc008xpj.1_5end | |association_with_transcript=5bp_to_ENSMUST00000038188,uc008xpi.1,uc008xpj.1_5end | ||
|cluster_id=chr5:67359660..67359686,+ | |||
|description=CAGE_peak_7_at_Limch1_5end | |description=CAGE_peak_7_at_Limch1_5end | ||
|id=chr5:67359660..67359686,+ | |id=chr5:67359660..67359686,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.11e-12!33;CL:0000047!3.11e-12!33;CL:0000031!3.11e-12!33;CL:0000404!3.11e-12!33;CL:0000221!5.85e-09!44;CL:0000133!5.85e-09!44;CL:0000393!1.81e-08!39;CL:0000211!1.81e-08!39;CL:0002319!1.81e-08!43;CL:0000117!2.92e-08!23;CL:0000337!2.92e-08!23 | |ontology_enrichment_celltype=CL:0000540!3.11e-12!33;CL:0000047!3.11e-12!33;CL:0000031!3.11e-12!33;CL:0000404!3.11e-12!33;CL:0000221!5.85e-09!44;CL:0000133!5.85e-09!44;CL:0000393!1.81e-08!39;CL:0000211!1.81e-08!39;CL:0002319!1.81e-08!43;CL:0000117!2.92e-08!23;CL:0000337!2.92e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.97e-11,33;CL:0000047,5.97e-11,33;CL:0000031,5.97e-11,33;CL:0000404,5.97e-11,33;CL:0000221,1.50e-08,44;CL:0000133,1.50e-08,44;CL:0000393,2.43e-08,39;CL:0000211,2.43e-08,39;CL:0002319,7.41e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.74e-22!102;UBERON:0000924!8.74e-22!102;UBERON:0006601!8.74e-22!102;UBERON:0000073!4.78e-19!75;UBERON:0001016!4.78e-19!75;UBERON:0002346!1.30e-18!71;UBERON:0003075!1.30e-18!71;UBERON:0007284!1.30e-18!71;UBERON:0000033!2.52e-18!63;UBERON:0001017!2.96e-18!73;UBERON:0005743!2.96e-18!73;UBERON:0003056!2.35e-14!49;UBERON:0001049!1.38e-13!52;UBERON:0005068!1.38e-13!52;UBERON:0006241!1.38e-13!52;UBERON:0007135!1.38e-13!52;UBERON:0000955!2.18e-13!50;UBERON:0006238!2.18e-13!50;UBERON:0002616!1.01e-12!49;UBERON:0002020!2.05e-12!34;UBERON:0002791!1.74e-10!29;UBERON:0003528!1.74e-10!29;UBERON:0001893!1.74e-10!29;UBERON:0003080!1.01e-09!40;UBERON:0002780!3.50e-09!39;UBERON:0001890!3.50e-09!39;UBERON:0006240!3.50e-09!39;UBERON:0000153!2.44e-08!94;UBERON:0007811!1.04e-07!86;UBERON:0000956!1.37e-07!21;UBERON:0001869!1.37e-07!21;UBERON:0000203!1.37e-07!21;UBERON:0000468!1.59e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.82e-27,95;UBERON:0000924,8.82e-27,95;UBERON:0006601,8.82e-27,95;UBERON:0002346,1.69e-24,64;UBERON:0003075,1.69e-24,64;UBERON:0007284,1.69e-24,64;UBERON:0001016,3.66e-23,75;UBERON:0001017,6.21e-23,73;UBERON:0010371,2.60e-22,73;UBERON:0000073,4.79e-18,54;UBERON:0003056,4.19e-17,49;UBERON:0001049,2.98e-16,52;UBERON:0005068,2.98e-16,52;UBERON:0006241,2.98e-16,52;UBERON:0007135,2.98e-16,52;UBERON:0010314,6.69e-15,92;UBERON:0000955,4.74e-14,47;UBERON:0006238,4.74e-14,47;UBERON:0002020,3.38e-13,34;UBERON:0002616,4.75e-13,46;UBERON:0003528,4.97e-11,29;UBERON:0002791,4.97e-11,29;UBERON:0001893,4.97e-11,29;UBERON:0003080,1.33e-10,40;UBERON:0002780,8.68e-10,39;UBERON:0001890,8.68e-10,39;UBERON:0006240,8.68e-10,39;UBERON:0002021,1.43e-09,10;UBERON:0000411,1.43e-09,10;UBERON:0001950,1.43e-09,10;UBERON:0000020,3.41e-09,12;UBERON:0001032,3.41e-09,12;UBERON:0004456,3.41e-09,12;UBERON:0000970,1.02e-08,9;UBERON:0000019,1.02e-08,9;UBERON:0000047,1.02e-08,9;UBERON:0010312,1.02e-08,9;UBERON:0004088,1.02e-08,9;UBERON:0002104,1.02e-08,9;UBERON:0001456,1.02e-08,9;UBERON:0003072,1.02e-08,9;UBERON:0004128,1.02e-08,9;UBERON:0003071,1.02e-08,9;UBERON:0000033,2.80e-08,13;UBERON:0005085,2.80e-08,13;UBERON:0000956,1.70e-07,21;UBERON:0001869,1.70e-07,21;UBERON:0000203,1.70e-07,21;UBERON:0002619,4.61e-07,17;UBERON:0003076,7.10e-07,12;UBERON:0003057,7.10e-07,12;UBERON:0001444,9.01e-07,11 | |||
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|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0.286533439938757,0,1.41621522601718,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,1.34796496001021,0.540023753326763,0.630974884054146,0.856952953211411,1.32521124570968,0.61245399607477,0.287536413054709,0.919218786610021,2.20231761998777,4.08599481872601,3.84016333140609,1.05509030184155,0.365950574409639,1.56274011167028,2.23346399201105,3.37657566019008,3.51435969886663,2.94628585473668,1.56608848879013,1.1183966749518,1.51452386666368,0.982430281388212,0,0,0,0,0,0,0.280888840263504,0,0,0,2.81686839553361,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0.346970653532272,0.304465478312141,0,0.753613202763113,0.352766121407114,0.125666591329675,0,0.578397427679647,0.884610551949874,1.13236794963186,2.42925670306433,1.93950101254089,0,3.80615036115011,4.39838084308256,0,0,0,0,3.2953940669061,3.20250421973039,0.502617408451458,5.04090528557602,3.58001640262463,2.0778804455956,4.54275536589721,0,0.870848794270651,0,1.89397670297827,0.650602214813519,2.75882525320168,2.16074555766419,2.56198190320716,7.75616090325138,7.81493693737584,6.93392761741993,2.58703370739016,0.862271971731369,0.756424320671277,1.58356011747554,0.657587197282725,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0,0.536546802799238,0.467061369468678,0.822799249567402,0.164167464079095,0.243206428637567,0.584799949701329,0.219550115291051,0.134206418760372,5.46753866266731,1.02904612379284,0,0,0.853153002140936,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.569003702859245,0.228497025219458,0,0.203651327845314,0.387904974335251,0.350679099451593,0.126473074248515,0.442830443938806,0.31399745568275,0.616985819609003,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,0.947457058852424,0.651859905768103,0.678980343100753,1.64283173801951,0.502518772325447,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0,2.40825884981688,2.57865710502847,0,1.00988370881749,1.57754109708128,0.780877488593277,2.36965737506079,1.43381278771531,1.55959071857676,0.849229592366497,2.83367491172426,1.46127928955656,2.76701444562566,10.2822821254978,0,0.534196811001766,0.325773918707152,0.329940245945071,0,0.242780636154981,0,0,0.590603785761546,0.307435147943927,0.516856586336442,0,0,0,1.05418608574999,0,0,1.08036656418786,0,0.428674070063185,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.32977250588296,0.484393280087717,0.72375509913787,0.119372344003136,0.164140899745061,0,4.63563255026274,0.512612642393558,0,0,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0,0,0.316335993581135,0,0.432021363287205,0,0,0.134864346384821,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.469428954583016,0,0.629156066554265,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0,0,0,0,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0.214368379079066,0,0.564751842617067,3.68260189205742,2.29158205375759,2.06223818812425,2.05524755931193,3.0215755895588,3.37511250115903,2.70192721934532,4.98456649882625,3.62432218226274,1.45302286617847,2.79317411380722,0.512200817262403,0.486213434136588,0.419226325255965,0.367687016900028,0.888986911206461,0.824140228955577,1.92551525755089,1.01078884705519,1.52087579934144,1.88626341386076,0.842773567228942,0.640251524048693,1.03383844120104,1.42888107384922,0.927074607558844,0.964546102318525,0.824171801606613,0.883193520806384,0.685738504770831,0.354951612318675,0.715308569841963,1.45346416632329,0.941093804153306,0.676916863133412,1.28049581010941,0.789209134313529,1.49384525230448,0.561142271657738,1.06771516311757,0.886540341380071,1.22769312950907,0.309873682371932,1.15743966588685,0.749431733813838,0,1.71896843238639,1.91288332068843,1.54413993383661,2.08681052058379 | ||
|short_description=p7@Limch1 | |short_description=p7@Limch1 | ||
}} | }} |
Latest revision as of 04:17, 26 September 2015
Short description: | p7@Limch1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Limch1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1027 |
Association with transcript: | 5bp_to_ENSMUST00000038188, uc008xpi.1, uc008xpj.1_5end |
EntrezGene: | Limch1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.97e-11 | 33 |
neuronal stem cell | 5.97e-11 | 33 |
neuroblast | 5.97e-11 | 33 |
electrically signaling cell | 5.97e-11 | 33 |
ectodermal cell | 1.50e-08 | 44 |
neurectodermal cell | 1.50e-08 | 44 |
electrically responsive cell | 2.43e-08 | 39 |
electrically active cell | 2.43e-08 | 39 |
neural cell | 7.41e-08 | 43 |