FFCP PHASE1:Mm9::chr6:77929509..77929616,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12386 | |EntrezGene=12386 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q61301,Q8BS72 | |UniProt=Q61301,Q8BS72 | ||
|association_with_transcript=0bp_to_ENSMUST00000075340,ENSMUST00000159626,ENSMUST00000160252,ENSMUST00000162273_5end | |association_with_transcript=0bp_to_ENSMUST00000075340,ENSMUST00000159626,ENSMUST00000160252,ENSMUST00000162273_5end | ||
|cluster_id=chr6:77929509..77929616,- | |||
|description=CAGE_peak_1_at_Ctnna2_5end | |description=CAGE_peak_1_at_Ctnna2_5end | ||
|id=chr6:77929509..77929616,- | |id=chr6:77929509..77929616,- | ||
|ontology_enrichment_celltype=CL:0000540!1.89e-16!33;CL:0000047!1.89e-16!33;CL:0000031!1.89e-16!33;CL:0000404!1.89e-16!33;CL:0002319!1.15e-15!43;CL:0000221!1.22e-15!44;CL:0000133!1.22e-15!44;CL:0000117!6.07e-15!23;CL:0000337!6.07e-15!23;CL:0000393!1.28e-11!39;CL:0000211!1.28e-11!39;CL:0000055!5.82e-11!50 | |ontology_enrichment_celltype=CL:0000540!1.89e-16!33;CL:0000047!1.89e-16!33;CL:0000031!1.89e-16!33;CL:0000404!1.89e-16!33;CL:0002319!1.15e-15!43;CL:0000221!1.22e-15!44;CL:0000133!1.22e-15!44;CL:0000117!6.07e-15!23;CL:0000337!6.07e-15!23;CL:0000393!1.28e-11!39;CL:0000211!1.28e-11!39;CL:0000055!5.82e-11!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.60e-17,33;CL:0000047,1.60e-17,33;CL:0000031,1.60e-17,33;CL:0000404,1.60e-17,33;CL:0002319,2.78e-16,43;CL:0000221,2.92e-16,44;CL:0000133,2.92e-16,44;CL:0000117,6.58e-16,23;CL:0000337,6.58e-16,23;CL:0000393,1.31e-12,39;CL:0000211,1.31e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.72e-33!73;UBERON:0005743!2.72e-33!73;UBERON:0000073!6.38e-33!75;UBERON:0001016!6.38e-33!75;UBERON:0002346!2.95e-29!71;UBERON:0003075!2.95e-29!71;UBERON:0007284!2.95e-29!71;UBERON:0004121!1.01e-28!102;UBERON:0000924!1.01e-28!102;UBERON:0006601!1.01e-28!102;UBERON:0001049!8.71e-26!52;UBERON:0005068!8.71e-26!52;UBERON:0006241!8.71e-26!52;UBERON:0007135!8.71e-26!52;UBERON:0000033!7.07e-25!63;UBERON:0000955!3.26e-24!50;UBERON:0006238!3.26e-24!50;UBERON:0002616!1.08e-23!49;UBERON:0003056!8.36e-23!49;UBERON:0003080!4.93e-20!40;UBERON:0002020!6.93e-20!34;UBERON:0002780!1.82e-19!39;UBERON:0001890!1.82e-19!39;UBERON:0006240!1.82e-19!39;UBERON:0002791!1.28e-16!29;UBERON:0003528!1.28e-16!29;UBERON:0001893!1.28e-16!29;UBERON:0007811!5.85e-14!86;UBERON:0000153!9.95e-13!94;UBERON:0000956!3.78e-12!21;UBERON:0001869!3.78e-12!21;UBERON:0000203!3.78e-12!21;UBERON:0002619!3.20e-10!17;UBERON:0000468!4.84e-09!333;UBERON:0002021!1.29e-07!10;UBERON:0000411!1.29e-07!10;UBERON:0001950!1.29e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.14e-35,73;UBERON:0001016,1.01e-34,75;UBERON:0002346,3.18e-31,64;UBERON:0003075,3.18e-31,64;UBERON:0007284,3.18e-31,64;UBERON:0004121,8.57e-30,95;UBERON:0000924,8.57e-30,95;UBERON:0006601,8.57e-30,95;UBERON:0000073,1.50e-28,54;UBERON:0001049,4.68e-27,52;UBERON:0005068,4.68e-27,52;UBERON:0006241,4.68e-27,52;UBERON:0007135,4.68e-27,52;UBERON:0010371,1.09e-24,73;UBERON:0003056,2.44e-24,49;UBERON:0000955,2.79e-23,47;UBERON:0006238,2.79e-23,47;UBERON:0002616,9.77e-23,46;UBERON:0010314,2.17e-22,92;UBERON:0003080,2.29e-21,40;UBERON:0002020,3.29e-21,34;UBERON:0002780,9.25e-21,39;UBERON:0001890,9.25e-21,39;UBERON:0006240,9.25e-21,39;UBERON:0003528,1.05e-17,29;UBERON:0002791,1.05e-17,29;UBERON:0001893,1.05e-17,29;UBERON:0000956,6.53e-13,21;UBERON:0001869,6.53e-13,21;UBERON:0000203,6.53e-13,21;UBERON:0002619,7.59e-11,17;UBERON:0002021,4.69e-08,10;UBERON:0000411,4.69e-08,10;UBERON:0001950,4.69e-08,10 | |||
|phase1_expression=4.80446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,18.0960879795771,6.15121311656521,12.8323733389027,6.57936181639204,7.18762821824858,0,0,0,0,0.573066879877513,1.54701627683233,90.030825082521,95.7473672482379,109.019001403063,1.35537812827653,0,0.449949858640699,0,0,5.39280198933128,13.831858991576,49.1488762342184,45.0919834027847,47.5334412654123,47.1324124266276,53.0084498283872,70.6771911470285,71.5965668506226,77.2143780752418,60.5637345496638,61.1622349428049,63.4394982348286,103.266963292742,98.6236798033976,96.3689735530006,28.4766658981409,43.895483582471,48.7426410408024,107.834062283362,90.5483889882295,106.620483012072,2.12033341332915,4.38315048619356,1.44932244350839,0,0,0.539703191637817,0.649776417447669,0,2.10666630197628,0,0,0,6.4787973097273,0,0,0,0,0,0,1.02765491747154,0,2.82040064223167,4.68410382268567,9.13396434936424,7.14908041493781,9.79697163592047,11.0533384707563,1.0053327306374,0.247194967734374,0.289198713839823,0,0.970601099684455,0,0,0,32.2058876712702,38.1193006400488,1.27728527604296,0,0,0,53.4752582675217,41.1750542536764,59.8114716057235,49.7137555749911,58.5588397286457,55.271619852843,58.893578493596,2.74966282395854,0,0,7.15502310014011,11.5807194236806,18.6220704591113,22.8678904852794,26.8254575747573,35.7871985535985,34.8469319174791,28.672727715277,32.855328083855,0.862271971731369,5.29497024469894,3.51902248327898,2.19195732427575,0.834141747676794,0.696504333044333,1.23469281844766,2.7864797354589,0,0,0,2.48550927042602,3.28336483973535,4.68161359798639,4.26140524053378,3.34499193970586,1.85120535464854,2.55787339225449,1.60964040839772,0.583826711835847,1.81015834904829,0.820837320395476,0.162137619091711,0,0,0.134206418760372,34.9081314616451,62.4630997142256,0,0.528901133327089,8.53153002140936,14.6309103272076,11.5980715189884,7.26060688644033,5.55945109612176,1.52180500890047,0.474529061544512,3.78807595865225,2.26201687920243,4.37704238490532,1.75467678407208,1.79763881730844,0.864552199498777,1.99141273254367,0.379335801906163,2.97046132785295,0,0.610953983535943,0.387904974335251,0.841629838683823,0.885311519739602,0.147610147979602,0,0,0,2.50267658574141,1.96558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0,0.482443521363367,0,8.90609635321278,6.84452901056509,3.90413697282933,1.40814148973101,1.50755631697634,0.238043640886014,0,0.945810864637146,0.44292937929755,0.318909537314974,0.491589944147214,0.172684981865896,0,0,0,0,0,57.4771112156295,55.2067043849277,0,0.252470927204373,15.1443945319803,15.6175497718655,31.020969273523,6.93009514062401,10.9171350300373,18.6830510320629,19.8357243820698,35.9474705230914,45.4580944638502,44.0210203497876,8.65834519770439,4.98583690268315,4.56083486190013,0.494910368917606,0,3.64170954232472,2.41858845571801,0.754420319023592,0.885905678642318,1.84461088766356,2.06742634534577,1.09060118843252,0.712994756769443,1.26414703174326,0,0,53.1085784975909,22.5076367539138,7.76152102696527,8.3591443662321,16.3153014950892,23.7230527410754,30.1124707701881,13.0919928119278,0,0.21183207086382,2.20528398054962,0,0.807322133479528,0.422190474497091,0.119372344003136,0,1.1659233465194,57.2964183212475,0.512612642393558,0.619160603889667,0,0,0.410082683163076,0.686334519619568,0,0,0,0,4.9032079005076,10.3692928234693,8.5324219249223,7.73626695253534,6.33251434863915,6.60835297285622,4.46328660916814,0.785267825952089,1.16653475962614,0,1.69107881605257,8.67195967055077,11.4166358415397,18.6673140810286,14.3367404060282,19.767866682421,34.6203854004974,37.3686584502137,45.4040961363328,16.1861360953424,9.50499020650956,0.948033361884535,5.87903124341476,6.26536838705446,2.7283372825337,1.25318686967237,0,0.841368146639782,1.03382669022204,0.807731599585181,0.685861259894999,1.00826185136841,0.584747284438515,0.865906574762965,0.233753804363138,0,0,0,0,0.386379188064381,0,0,0,0,76.241498753304,73.1917126046411,81.3511629083943,63.4138242848207,83.5800674120184,85.3595104050362,66.152205022717,60.3430412320455,65.7056493027097,63.166758033722,13.9075045762797,45.8878604411186,33.6345203335644,21.8796045361465,19.0747977991464,15.2590112013512,16.8907513129228,17.3069448080671,24.0689407193861,18.1941992469934,20.5318232911094,20.7488975524684,20.8820561657838,20.3599984647484,20.2172850723759,19.0517476513229,20.04798838846,22.1845603533261,21.8405527425753,19.8718542181436,17.4863318716562,15.4403951358624,19.0748951957857,23.8368123277019,21.8333762563567,20.6459643255691,24.5123483649515,17.6256706663355,19.9632047353417,15.7119836064167,22.8965584979656,20.0949144046149,20.0523211153148,20.9164735601054,15.046715656529,28.4784058849258,14.7376913320607,11.6030369186081,8.41668661102911,5.07360263974886,4.63735671240843 | |phase1_expression=4.80446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,18.0960879795771,6.15121311656521,12.8323733389027,6.57936181639204,7.18762821824858,0,0,0,0,0.573066879877513,1.54701627683233,90.030825082521,95.7473672482379,109.019001403063,1.35537812827653,0,0.449949858640699,0,0,5.39280198933128,13.831858991576,49.1488762342184,45.0919834027847,47.5334412654123,47.1324124266276,53.0084498283872,70.6771911470285,71.5965668506226,77.2143780752418,60.5637345496638,61.1622349428049,63.4394982348286,103.266963292742,98.6236798033976,96.3689735530006,28.4766658981409,43.895483582471,48.7426410408024,107.834062283362,90.5483889882295,106.620483012072,2.12033341332915,4.38315048619356,1.44932244350839,0,0,0.539703191637817,0.649776417447669,0,2.10666630197628,0,0,0,6.4787973097273,0,0,0,0,0,0,1.02765491747154,0,2.82040064223167,4.68410382268567,9.13396434936424,7.14908041493781,9.79697163592047,11.0533384707563,1.0053327306374,0.247194967734374,0.289198713839823,0,0.970601099684455,0,0,0,32.2058876712702,38.1193006400488,1.27728527604296,0,0,0,53.4752582675217,41.1750542536764,59.8114716057235,49.7137555749911,58.5588397286457,55.271619852843,58.893578493596,2.74966282395854,0,0,7.15502310014011,11.5807194236806,18.6220704591113,22.8678904852794,26.8254575747573,35.7871985535985,34.8469319174791,28.672727715277,32.855328083855,0.862271971731369,5.29497024469894,3.51902248327898,2.19195732427575,0.834141747676794,0.696504333044333,1.23469281844766,2.7864797354589,0,0,0,2.48550927042602,3.28336483973535,4.68161359798639,4.26140524053378,3.34499193970586,1.85120535464854,2.55787339225449,1.60964040839772,0.583826711835847,1.81015834904829,0.820837320395476,0.162137619091711,0,0,0.134206418760372,34.9081314616451,62.4630997142256,0,0.528901133327089,8.53153002140936,14.6309103272076,11.5980715189884,7.26060688644033,5.55945109612176,1.52180500890047,0.474529061544512,3.78807595865225,2.26201687920243,4.37704238490532,1.75467678407208,1.79763881730844,0.864552199498777,1.99141273254367,0.379335801906163,2.97046132785295,0,0.610953983535943,0.387904974335251,0.841629838683823,0.885311519739602,0.147610147979602,0,0,0,2.50267658574141,1.96558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0,0.482443521363367,0,8.90609635321278,6.84452901056509,3.90413697282933,1.40814148973101,1.50755631697634,0.238043640886014,0,0.945810864637146,0.44292937929755,0.318909537314974,0.491589944147214,0.172684981865896,0,0,0,0,0,57.4771112156295,55.2067043849277,0,0.252470927204373,15.1443945319803,15.6175497718655,31.020969273523,6.93009514062401,10.9171350300373,18.6830510320629,19.8357243820698,35.9474705230914,45.4580944638502,44.0210203497876,8.65834519770439,4.98583690268315,4.56083486190013,0.494910368917606,0,3.64170954232472,2.41858845571801,0.754420319023592,0.885905678642318,1.84461088766356,2.06742634534577,1.09060118843252,0.712994756769443,1.26414703174326,0,0,53.1085784975909,22.5076367539138,7.76152102696527,8.3591443662321,16.3153014950892,23.7230527410754,30.1124707701881,13.0919928119278,0,0.21183207086382,2.20528398054962,0,0.807322133479528,0.422190474497091,0.119372344003136,0,1.1659233465194,57.2964183212475,0.512612642393558,0.619160603889667,0,0,0.410082683163076,0.686334519619568,0,0,0,0,4.9032079005076,10.3692928234693,8.5324219249223,7.73626695253534,6.33251434863915,6.60835297285622,4.46328660916814,0.785267825952089,1.16653475962614,0,1.69107881605257,8.67195967055077,11.4166358415397,18.6673140810286,14.3367404060282,19.767866682421,34.6203854004974,37.3686584502137,45.4040961363328,16.1861360953424,9.50499020650956,0.948033361884535,5.87903124341476,6.26536838705446,2.7283372825337,1.25318686967237,0,0.841368146639782,1.03382669022204,0.807731599585181,0.685861259894999,1.00826185136841,0.584747284438515,0.865906574762965,0.233753804363138,0,0,0,0,0.386379188064381,0,0,0,0,76.241498753304,73.1917126046411,81.3511629083943,63.4138242848207,83.5800674120184,85.3595104050362,66.152205022717,60.3430412320455,65.7056493027097,63.166758033722,13.9075045762797,45.8878604411186,33.6345203335644,21.8796045361465,19.0747977991464,15.2590112013512,16.8907513129228,17.3069448080671,24.0689407193861,18.1941992469934,20.5318232911094,20.7488975524684,20.8820561657838,20.3599984647484,20.2172850723759,19.0517476513229,20.04798838846,22.1845603533261,21.8405527425753,19.8718542181436,17.4863318716562,15.4403951358624,19.0748951957857,23.8368123277019,21.8333762563567,20.6459643255691,24.5123483649515,17.6256706663355,19.9632047353417,15.7119836064167,22.8965584979656,20.0949144046149,20.0523211153148,20.9164735601054,15.046715656529,28.4784058849258,14.7376913320607,11.6030369186081,8.41668661102911,5.07360263974886,4.63735671240843 | ||
|short_description=p1@Ctnna2 | |short_description=p1@Ctnna2 | ||
}} | }} |
Latest revision as of 18:03, 1 October 2015
Short description: | p1@Ctnna2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ctnna2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000075340, ENSMUST00000159626, ENSMUST00000160252, ENSMUST00000162273_5end |
EntrezGene: | Ctnna2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.60e-17 | 33 |
neuronal stem cell | 1.60e-17 | 33 |
neuroblast | 1.60e-17 | 33 |
electrically signaling cell | 1.60e-17 | 33 |
neural cell | 2.78e-16 | 43 |
ectodermal cell | 2.92e-16 | 44 |
neurectodermal cell | 2.92e-16 | 44 |
CNS neuron (sensu Vertebrata) | 6.58e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.58e-16 | 23 |
electrically responsive cell | 1.31e-12 | 39 |
electrically active cell | 1.31e-12 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.14e-35 | 73 |
nervous system | 1.01e-34 | 75 |
neurectoderm | 3.18e-31 | 64 |
neural plate | 3.18e-31 | 64 |
presumptive neural plate | 3.18e-31 | 64 |
ectoderm-derived structure | 8.57e-30 | 95 |
ectoderm | 8.57e-30 | 95 |
presumptive ectoderm | 8.57e-30 | 95 |
regional part of nervous system | 1.50e-28 | 54 |
neural tube | 4.68e-27 | 52 |
neural rod | 4.68e-27 | 52 |
future spinal cord | 4.68e-27 | 52 |
neural keel | 4.68e-27 | 52 |
ecto-epithelium | 1.09e-24 | 73 |
pre-chordal neural plate | 2.44e-24 | 49 |
brain | 2.79e-23 | 47 |
future brain | 2.79e-23 | 47 |
regional part of brain | 9.77e-23 | 46 |
structure with developmental contribution from neural crest | 2.17e-22 | 92 |
anterior neural tube | 2.29e-21 | 40 |
gray matter | 3.29e-21 | 34 |
regional part of forebrain | 9.25e-21 | 39 |
forebrain | 9.25e-21 | 39 |
future forebrain | 9.25e-21 | 39 |
brain grey matter | 1.05e-17 | 29 |
regional part of telencephalon | 1.05e-17 | 29 |
telencephalon | 1.05e-17 | 29 |
cerebral cortex | 6.53e-13 | 21 |
cerebral hemisphere | 6.53e-13 | 21 |
pallium | 6.53e-13 | 21 |
regional part of cerebral cortex | 7.59e-11 | 17 |
occipital lobe | 4.69e-08 | 10 |
visual cortex | 4.69e-08 | 10 |
neocortex | 4.69e-08 | 10 |