FF:12750-136A5: Difference between revisions

Revision as of 23:08, 9 July 2012

Name:	Aortic smooth muscle cell response to IL1b, 00hr00min, biol_rep2 (LK32)
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	aorta
dev stage	NA
sex	NA
age	NA
cell type	smooth muscle cell, vascular associated
cell line	NA
company	NA
collaboration	Levon Khachigian (University of New South Wales)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.173
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.325
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.691
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.0488
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.21
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.238
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.62
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.109
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.097
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.248
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.691
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.00548
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.591
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.413
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.406
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.47
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.173
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.836
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.99
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.392
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.594
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13369

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.933
MA0003.1	MA0003.1	0.545
MA0004.1	MA0004.1	0.54
MA0006.1	MA0006.1	0.14
MA0007.1	MA0007.1	0.739
MA0009.1	MA0009.1	0.724
MA0014.1	MA0014.1	0.955
MA0017.1	MA0017.1	0.483
MA0018.2	MA0018.2	1.43274e-6
MA0019.1	MA0019.1	0.806
MA0024.1	MA0024.1	3.52368e-6
MA0025.1	MA0025.1	5.40684e-4
MA0027.1	MA0027.1	0.917
MA0028.1	MA0028.1	0.182
MA0029.1	MA0029.1	0.501
MA0030.1	MA0030.1	0.0942
MA0031.1	MA0031.1	0.444
MA0035.2	MA0035.2	0.164
MA0038.1	MA0038.1	7.85364e-4
MA0039.2	MA0039.2	0.0223
MA0040.1	MA0040.1	0.496
MA0041.1	MA0041.1	0.868
MA0042.1	MA0042.1	0.804
MA0043.1	MA0043.1	1.46873e-6
MA0046.1	MA0046.1	0.166
MA0047.2	MA0047.2	0.719
MA0048.1	MA0048.1	0.321
MA0050.1	MA0050.1	2.65406e-4
MA0051.1	MA0051.1	0.0362
MA0052.1	MA0052.1	0.03
MA0055.1	MA0055.1	0.772
MA0057.1	MA0057.1	0.332
MA0058.1	MA0058.1	0.319
MA0059.1	MA0059.1	0.302
MA0060.1	MA0060.1	3.31689e-13
MA0061.1	MA0061.1	0.198
MA0062.2	MA0062.2	2.18724e-4
MA0065.2	MA0065.2	0.381
MA0066.1	MA0066.1	0.0365
MA0067.1	MA0067.1	0.00103
MA0068.1	MA0068.1	0.823
MA0069.1	MA0069.1	0.354
MA0070.1	MA0070.1	0.641
MA0071.1	MA0071.1	0.972
MA0072.1	MA0072.1	0.932
MA0073.1	MA0073.1	0.83
MA0074.1	MA0074.1	0.216
MA0076.1	MA0076.1	0.0225
MA0077.1	MA0077.1	0.165
MA0078.1	MA0078.1	0.124
MA0079.2	MA0079.2	0.0757
MA0080.2	MA0080.2	1.43234e-5
MA0081.1	MA0081.1	0.0337
MA0083.1	MA0083.1	0.048
MA0084.1	MA0084.1	0.19
MA0087.1	MA0087.1	0.793
MA0088.1	MA0088.1	0.381
MA0090.1	MA0090.1	0.151
MA0091.1	MA0091.1	0.134
MA0092.1	MA0092.1	0.181
MA0093.1	MA0093.1	0.444
MA0099.2	MA0099.2	0.145
MA0100.1	MA0100.1	0.351
MA0101.1	MA0101.1	0.903
MA0102.2	MA0102.2	0.163
MA0103.1	MA0103.1	0.448
MA0104.2	MA0104.2	0.293
MA0105.1	MA0105.1	6.32179e-4
MA0106.1	MA0106.1	2.22003e-4
MA0107.1	MA0107.1	0.865
MA0108.2	MA0108.2	0.664
MA0111.1	MA0111.1	0.741
MA0112.2	MA0112.2	0.00283
MA0113.1	MA0113.1	0.597
MA0114.1	MA0114.1	0.806
MA0115.1	MA0115.1	0.608
MA0116.1	MA0116.1	0.0317
MA0117.1	MA0117.1	0.715
MA0119.1	MA0119.1	0.0385
MA0122.1	MA0122.1	0.931
MA0124.1	MA0124.1	0.959
MA0125.1	MA0125.1	0.0617
MA0131.1	MA0131.1	0.238
MA0135.1	MA0135.1	0.0342
MA0136.1	MA0136.1	3.86975e-5
MA0137.2	MA0137.2	0.0268
MA0138.2	MA0138.2	0.186
MA0139.1	MA0139.1	0.27
MA0140.1	MA0140.1	0.333
MA0141.1	MA0141.1	0.451
MA0142.1	MA0142.1	0.951
MA0143.1	MA0143.1	0.35
MA0144.1	MA0144.1	0.629
MA0145.1	MA0145.1	0.36
MA0146.1	MA0146.1	0.815
MA0147.1	MA0147.1	0.612
MA0148.1	MA0148.1	0.912
MA0149.1	MA0149.1	0.106
MA0150.1	MA0150.1	0.706
MA0152.1	MA0152.1	0.144
MA0153.1	MA0153.1	0.209
MA0154.1	MA0154.1	0.0777
MA0155.1	MA0155.1	0.274
MA0156.1	MA0156.1	0.0049
MA0157.1	MA0157.1	0.99
MA0159.1	MA0159.1	0.498
MA0160.1	MA0160.1	0.389
MA0162.1	MA0162.1	0.0308
MA0163.1	MA0163.1	4.02076e-6
MA0164.1	MA0164.1	0.738
MA0258.1	MA0258.1	0.049
MA0259.1	MA0259.1	0.186

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13369

Novel motif	Logo	P-value
1	1	0.202
10	10	0.552
100	100	0.443
101	101	0.898
102	102	0.933
103	103	0.227
104	104	0.828
105	105	0.311
106	106	0.00551
107	107	0.0842
108	108	0.239
109	109	0.229
11	11	0.0768
110	110	0.21
111	111	0.103
112	112	0.182
113	113	0.0826
114	114	0.0206
115	115	0.0895
116	116	0.0311
117	117	0.347
118	118	0.339
119	119	0.114
12	12	0.997
120	120	0.0146
121	121	0.766
122	122	0.106
123	123	0.253
124	124	0.879
125	125	0.323
126	126	0.597
127	127	0.982
128	128	0.0435
129	129	0.408
13	13	0.506
130	130	0.313
131	131	0.297
132	132	0.813
133	133	0.838
134	134	0.52
135	135	0.387
136	136	0.667
137	137	0.167
138	138	0.931
139	139	0.193
14	14	0.916
140	140	0.218
141	141	0.736
142	142	0.623
143	143	0.022
144	144	0.302
145	145	0.135
146	146	0.836
147	147	0.153
148	148	0.0888
149	149	0.0556
15	15	0.392
150	150	0.119
151	151	0.757
152	152	0.0407
153	153	0.618
154	154	0.829
155	155	0.0387
156	156	0.661
157	157	0.269
158	158	0.0314
159	159	0.161
16	16	0.094
160	160	0.124
161	161	0.912
162	162	0.0844
163	163	0.95
164	164	0.0168
165	165	0.74
166	166	0.42
167	167	0.546
168	168	0.456
169	169	0.0705
17	17	0.115
18	18	0.089
19	19	0.0458
2	2	0.535
20	20	0.79
21	21	0.297
22	22	0.501
23	23	0.129
24	24	0.942
25	25	0.33
26	26	0.0858
27	27	0.312
28	28	0.456
29	29	0.0932
3	3	0.234
30	30	0.901
31	31	0.306
32	32	1.27625e-4
33	33	0.655
34	34	0.854
35	35	0.157
36	36	0.868
37	37	0.0179
38	38	0.477
39	39	0.297
4	4	0.953
40	40	0.929
41	41	0.618
42	42	0.847
43	43	0.189
44	44	0.0143
45	45	0.548
46	46	0.0513
47	47	0.289
48	48	0.169
49	49	0.449
5	5	0.417
50	50	0.832
51	51	0.635
52	52	0.533
53	53	0.432
54	54	0.523
55	55	0.101
56	56	0.649
57	57	0.384
58	58	0.821
59	59	0.0679
6	6	0.428
60	60	0.387
61	61	0.426
62	62	0.429
63	63	0.191
64	64	0.576
65	65	0.124
66	66	0.548
67	67	0.475
68	68	0.383
69	69	0.787
7	7	0.738
70	70	0.0418
71	71	0.216
72	72	0.777
73	73	0.0193
74	74	0.0376
75	75	0.349
76	76	0.399
77	77	0.0167
78	78	0.556
79	79	0.00343
8	8	0.0179
80	80	0.273
81	81	0.291
82	82	0.0269
83	83	0.852
84	84	0.878
85	85	0.0513
86	86	0.647
87	87	0.136
88	88	0.16
89	89	0.141
9	9	0.422
90	90	0.178
91	91	0.168
92	92	0.17
93	93	0.486
94	94	0.33
95	95	0.243
96	96	0.709
97	97	0.65
98	98	0.768
99	99	0.00807

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13369

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000556 human Aortic Smooth Muscle cells 0min after treatment with IL1b sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0002539 (aortic smooth muscle cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001135 (smooth muscle tissue)
0000947 (aorta)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0004573 (systemic artery)
0002385 (muscle tissue)
0003509 (arterial blood vessel)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0004237 (blood vessel smooth muscle)
0004695 (arterial system smooth muscle)
0002049 (vasculature)
0010317 (germ layer / neural crest derived structure)
0002111 (artery smooth muscle tissue)
0007798 (vascular system)
0001015 (musculature)
0004178 (aorta smooth muscle tissue)
0002204 (musculoskeletal system)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0010191 (aortic system)
0000383 (musculature of body)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000350 (experimentally modified sample)
0000344 (0 minute sample)
0000340 (IL1-beta treatment sample)
0000556 (human Aortic Smooth Muscle cells 0min after treatment with IL1b sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000514 (smooth muscle myoblast)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!2.05!110.27!SOX17;;chr21:38071430..38071456,+!p1@SIM2!1.76!56.60!SIM2;;chr12:66218836..66218888,+!p1@HMGA2!1.46!248.85!HMGA2;;chr14:29235961..29236008,+!p1@FOXG1!1.39!23.42!FOXG1;;chr1:170633348..170633399,+!p2@PRRX1!1.33!27.81!PRRX1;;chr1:170632285..170632309,+!p1@PRRX1!1.29!20.98!PRRX1;;chr14:29234581..29234601,+!p2@FOXG1!1.26!17.08!FOXG1;;chr10:94449703..94449718,+!p1@HHEX!1.25!63.43!HHEX;;chr12:66218904..66218913,+!p11@HMGA2!1.25!16.59!HMGA2;;chr11:34642612..34642646,+!p1@EHF!1.23!16.10!EHF;;chr12:66218923..66218934,+!p14@HMGA2!1.23!16.10!HMGA2;;chr17:1959369..1959388,+!p2@HIC1!1.21!40.01!HIC1;;chr8:11561684..11561751,+!p1@GATA4!1.18!14.15!GATA4;;chr12:66218598..66218645,+!p2@HMGA2!1.17!63.43!HMGA2;;chr14:29236269..29236285,+!p3@FOXG1!1.17!13.66!FOXG1;;chr1:170633262..170633285,+!p3@PRRX1!1.14!14.64!PRRX1;;chr12:66358080..66358094,+!p15@HMGA2!1.12!12.20!HMGA2;;chr11:46299199..46299233,+!p1@CREB3L1!1.10!60.02!CREB3L1;;chr17:46622205..46622218,-!p3@HOXB2!1.09!13.17!HOXB2;;chr16:86544113..86544145,+!p1@FOXF1!1.08!13.66!FOXF1;;chr12:66218255..66218304,+!p3@HMGA2!1.05!27.81!HMGA2;;chr1:170632959..170632987,+!p4@PRRX1!1.05!11.22!PRRX1;;chr3:141087393..141087426,+!p3@ZBTB38!1.04!40.50!ZBTB38;;chr2:19558373..19558392,-!p1@OSR1!0.99!24.40!OSR1;;chr1:170633058..170633084,+!p5@PRRX1!0.99!8.78!PRRX1;;chr5:72744594..72744609,-!p1@FOXD1!0.98!40.50!FOXD1;;chr2:239756671..239756732,+!p1@TWIST2!0.98!27.81!TWIST2;;chr12:66218212..66218244,+!p5@HMGA2!0.97!12.20!HMGA2;;chr1:170632115..170632136,+!p9@PRRX1!0.97!8.29!PRRX1;;chr11:61520075..61520136,+!p1@C11orf9!0.96!17.57!C11orf9;;chr17:46655704..46655718,-!p2@HOXB4!0.96!12.20!HOXB4;;chrY:2803415..2803468,+!p1@ZFY!0.94!7.81!ZFY;;chr3:141105705..141105770,+!p4@ZBTB38!0.93!9.27!ZBTB38;;chr19:42636586..42636607,-!p1@POU2F2!0.92!20.98!POU2F2;;chr11:46299539..46299620,+!p2@CREB3L1!0.89!11.71!CREB3L1;;chr21:38071462..38071474,+!p3@SIM2!0.89!6.83!SIM2;;chr7:27183291..27183324,-!p1@HOXA5!0.89!6.83!HOXA5;;chr17:1958388..1958404,+!p1@HIC1!0.88!43.91!HIC1;;chr17:46622070..46622109,-!p1@HOXB2!0.88!15.13!HOXB2;;chr17:46688334..46688385,-!p1@HOXB7!0.88!9.76!HOXB7;;chr17:46621937..46621966,-!p2@HOXB2!0.87!18.05!HOXB2;;chr1:221052840..221052875,+!p4@HLX!0.87!7.81!HLX;;chr21:38071403..38071428,+!p2@SIM2!0.87!6.34!SIM2;;chr1:221052776..221052799,+!p1@HLX!0.86!11.71!HLX;;chr1:170632439..170632465,+!p11@PRRX1!0.84!5.86!PRRX1;;chr6:134210243..134210257,+!p1@TCF21!0.84!5.86!TCF21;;chr20:50721803..50721857,-!p2@ZFP64!0.83!9.27!ZFP64;;chr18:53068911..53068935,-!p4@TCF4!0.82!6.34!TCF4;;chr6:34204921..34204939,+!p3@HMGA1!0.80!174.68!HMGA1;;chr20:42543441..42543497,+!p1@TOX2!0.80!25.86!TOX2;;chr5:321810..321877,+!p1@AHRR!0.80!18.05!AHRR;;chr17:41622925..41622976,-!p3@ETV4!0.80!8.29!ETV4;;chr17:46659728..46659749,-!p3@HOXB3!0.80!5.37!HOXB3;;chr1:170632137..170632172,+!p10@PRRX1!0.80!5.37!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!0.80!5.37!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!0.80!5.37!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.80!5.37!PRRX1;;chr1:151032860..151032918,+!p1@MLLT11!0.79!67.33!MLLT11;;chr20:42543506..42543549,+!p2@TOX2!0.79!13.17!TOX2;;chr20:6748325..6748352,+!p1@BMP2!0.79!7.81!BMP2;;chr12:125002739..125002756,-!p6@NCOR2!0.78!7.81!NCOR2;;chr17:46675420..46675465,-!p3@HOXB6!0.78!5.86!HOXB6;;chr6:45296048..45296082,+!p1@RUNX2!0.78!5.86!RUNX2;;chr15:96869255..96869291,+!p6@NR2F2!0.77!9.27!NR2F2;;chr17:46622114..46622138,-!p4@HOXB2!0.77!7.81!HOXB2;;chr8:55370720..55370733,+!p2@SOX17!0.77!4.88!SOX17;;chr12:66218183..66218209,+!p4@HMGA2!0.76!9.76!HMGA2;;chr2:66662281..66662308,+!p1@MEIS1!0.75!17.57!MEIS1;;chr15:83953397..83953425,-!p1@BNC1!0.75!5.37!BNC1;;chr3:157823517..157823562,-!p1@SHOX2!0.74!4.88!SHOX2;;chr1:170632028..170632043,+!p20@PRRX1!0.73!4.39!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.73!4.39!PRRX1;;chr17:46621146..46621180,-!p10@HOXB2!0.73!4.39!HOXB2;;chrY:21906594..21906622,-!p1@KDM5D!0.73!4.39!KDM5D;;chr17:41622765..41622821,-!p2@ETV4!0.72!6.83!ETV4;;chr5:72744445..72744466,-!p2@FOXD1!0.71!7.32!FOXD1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.70!327.40!TAX1BP3;;chr6:21597514..21597578,+!p4@SOX4!0.70!7.32!SOX4;;chr6:21597370..21597408,+!p5@SOX4!0.70!6.83!SOX4;;chr7:26191809..26191890,+!p1@NFE2L3!0.69!21.96!NFE2L3;;chr15:96869206..96869220,+!p21@NR2F2!0.69!3.90!NR2F2;;chr17:46655672..46655697,-!p3@HOXB4!0.69!3.90!HOXB4;;chr2:102091144..102091183,-!p2@RFX8!0.69!3.90!RFX8;;chr12:66357214..66357233,+!p13@HMGA2!0.69!3.90!HMGA2;;chr14:29236169..29236216,+!p6@FOXG1!0.69!3.90!FOXG1;;chr1:170632250..170632277,+!p7@PRRX1!0.69!3.90!PRRX1;;chr15:57511609..57511651,+!p2@TCF12!0.68!6.83!TCF12;;chr2:66662895..66662907,+!p3@MEIS1!0.68!4.88!MEIS1;;chr11:65686802..65686818,+!p6@DRAP1!0.67!6.83!DRAP1;;chr6:106534192..106534224,+!p1@PRDM1!0.66!11.22!PRDM1;;chr15:96876966..96877017,+!p12@NR2F2!0.66!5.37!NR2F2;;chr1:221052994..221053008,+!p6@HLX!0.66!4.39!HLX;;chr15:96874244..96874259,+!p5@NR2F2!0.65!9.27!NR2F2;;chr3:178789522..178789564,-!p2@ZMAT3!0.64!29.28!ZMAT3;;chr9:35732647..35732678,+!p2@CREB3!0.64!21.96!CREB3;;chr10:94449675..94449694,+!p2@HHEX!0.64!10.25!HHEX;;chr1:221053049..221053075,+!p3@HLX!0.64!6.34!HLX;;chr19:42636625..42636632,-!p2@POU2F2!0.64!3.42!POU2F2;;chr10:131762504..131762555,-!p1@EBF3!0.64!3.42!EBF3;;chr7:27142290..27142310,-!p1@HOXA2!0.64!3.42!HOXA2;;chr7:27153454..27153469,-!p2@HOXA3!0.64!3.42!HOXA3;;chr7:27183263..27183284,-!p2@HOXA5!0.64!3.42!HOXA5;;chr8:77593750..77593757,+!p3@ZFHX4!0.64!3.42!ZFHX4;;chr16:31076332..31076388,-!p3@ZNF668!0.64!3.42!ZNF668;;chr16:86612320..86612394,+!p1@FOXL1!0.64!3.42!FOXL1;;chr3:71007344..71007348,-!p6@FOXP1!0.63!15.13!FOXP1;;chr20:50179368..50179392,-!p2@NFATC2!0.63!4.39!NFATC2;;chr1:37940170..37940190,+!p1@ZC3H12A!0.62!46.35!ZC3H12A;;chr11:65687362..65687436,+!p3@DRAP1!0.62!17.08!DRAP1;;chr10:114710244..114710257,+!p3@TCF7L2!0.62!9.76!TCF7L2;;chr19:35455110..35455149,-!p1@ZNF792!0.62!6.83!ZNF792;;chr2:200322654..200322707,-!p2@SATB2!0.62!4.88!SATB2;;chr5:72743793..72743855,-!p4@FOXD1!0.62!3.90!FOXD1;;chr11:65686732..65686756,+!p2@DRAP1!0.61!15.13!DRAP1;;chr17:46655730..46655791,-!p1@HOXB4!0.61!8.78!HOXB4;;chr18:3450293..3450304,+!p4@TGIF1!0.60!8.29!TGIF1;;chr7:137564372..137564394,-!p7@CREB3L2!0.60!5.37!CREB3L2;;chr1:151032739..151032748,+!p6@MLLT11!0.60!3.90!MLLT11;;chr6:34204672..34204692,+!p1@HMGA1!0.59!397.67!HMGA1;;chr14:62162258..62162269,+!p2@HIF1A!0.59!34.16!HIF1A;;chr12:26277956..26277980,-!p1@BHLHE41!0.59!12.20!BHLHE41;;chr6:21597431..21597447,+!p8@SOX4!0.59!3.90!SOX4;;chr19:19303794..19303805,+!p5@RFXANK!0.59!3.42!RFXANK;;chr15:67418177..67418204,+!p9@SMAD3!0.59!2.93!SMAD3;;chr17:46675558..46675577,-!p2@HOXB6!0.59!2.93!HOXB6;;chr19:9609272..9609297,-!p1@ZNF560!0.59!2.93!ZNF560;;chr1:170633194..170633205,+!p18@PRRX1!0.59!2.93!PRRX1;;chr7:35293685..35293718,-!p1@TBX20!0.59!2.93!TBX20;;chr2:5832508..5832524,+!p1@SOX11!0.59!2.93!SOX11;;chr11:128563948..128564003,+!p1@FLI1!0.58!41.47!FLI1;;chr1:158979792..158979814,+!p2@IFI16!0.58!32.69!IFI16;;chr2:239756739..239756755,+!p2@TWIST2!0.58!5.37!TWIST2;;chr12:80085061..80085119,-!p6@PAWR!0.58!4.88!PAWR;;chr15:96869292..96869320,+!p15@NR2F2!0.58!4.39!NR2F2;;chr4:81118647..81118666,+!p1@PRDM8!0.58!3.90!PRDM8;;chr15:96869222..96869251,+!p18@NR2F2!0.58!3.42!NR2F2;;chr7:44143925..44143970,+!p1@AEBP1!0.57!75.63!AEBP1;;chr3:168864315..168864339,-!p2@MECOM!0.57!4.88!MECOM;;chr12:66218573..66218596,+!p7@HMGA2!0.57!4.39!HMGA2;;chr17:46621101..46621143,-!p7@HOXB2!0.57!3.90!HOXB2;;chr8:49833948..49833973,-!p2@SNAI2!0.56!20.49!SNAI2;;chr11:65687158..65687216,+!p4@DRAP1!0.56!18.54!DRAP1;;chr10:35484804..35484902,+!p2@CREM!0.56!12.20!CREM;;chr6:1389789..1389821,+!p1@FOXF2!0.56!3.90!FOXF2;;chr15:96869114..96869160,+!p11@NR2F2!0.56!3.90!NR2F2;;chr22:38598086..38598105,+!p1@MAFF!0.54!33.67!MAFF;;chr6:34205372..34205412,+!p5@HMGA1!0.54!15.61!HMGA1;;chr14:62213758..62213774,+!p8@HIF1A!0.54!3.42!HIF1A;;chr2:101591314..101591333,+!p2@NPAS2!0.54!2.93!NPAS2;;chr4:111544219..111544240,-!p1@PITX2!0.54!2.44!PITX2;;chr16:30406423..30406447,+!p4@ZNF48!0.54!2.44!ZNF48;;chr9:16705069..16705086,-!p3@BNC2!0.54!2.44!BNC2;;chr21:38071760..38071776,+!p5@SIM2!0.54!2.44!SIM2;;chr11:46333934..46333963,+!p5@CREB3L1!0.54!2.44!CREB3L1;;chr12:66218469..66218477,+!p16@HMGA2!0.54!2.44!HMGA2;;chr12:66357317..66357328,+!p19@HMGA2!0.54!2.44!HMGA2;;chr5:139492456..139492489,+!p7@PURA!0.54!2.44!PURA;;chr7:1577899..1577943,+!p3@MAFK!0.54!2.44!MAFK;;chr7:27169801..27169844,-!p2@HOXA4!0.54!2.44!HOXA4;;chr10:63809106..63809127,+!p1@ARID5B!0.53!40.99!ARID5B;;chr14:62162285..62162296,+!p3@HIF1A!0.53!15.61!HIF1A;;chr3:71630980..71631110,-!p3@FOXP1!0.53!10.25!FOXP1;;chr11:65430554..65430579,-!p3@RELA!0.53!7.32!RELA;;chr19:58373157..58373159,+!p4@ZNF587!0.53!4.88!ZNF587;;chr19:47922750..47922795,-!p1@MEIS3!0.53!4.39!MEIS3;;chr1:158979872..158979898,+!p3@IFI16!0.52!8.78!IFI16;;chr2:200323414..200323455,-!p1@SATB2!0.52!5.86!SATB2;;chr1:151032782..151032801,+!p4@MLLT11!0.52!5.37!MLLT11;;chr2:231280954..231280965,+!p2@SP100!0.52!4.88!SP100;;chr7:44143978..44143989,+!p2@AEBP1!0.52!4.88!AEBP1;;chr5:43067636..43067674,+!p6@ZNF131!0.52!3.42!ZNF131;;chr17:41622834..41622883,-!p6@ETV4!0.52!2.93!ETV4;;chr8:49833978..49833996,-!p1@SNAI2!0.51!60.99!SNAI2;;chr6:43140095..43140145,+!p5@SRF!0.51!2.93!SRF;;chr6:85473156..85473210,-!p2@TBX18!0.51!2.93!TBX18;;chr1:23696448..23696453,-!p5@ZNF436!0.51!2.93!ZNF436;;chr6:1312325..1312340,+!p1@FOXQ1!0.49!3.90!FOXQ1;;chr17:41623009..41623053,-!p4@ETV4!0.49!3.90!ETV4;;chr8:72756213..72756243,-!p5@MSC!0.49!2.93!MSC;;chr6:21597765..21597779,+!p2@SOX4!0.48!21.96!SOX4;;chr14:24837368..24837401,+!p1@NFATC4!0.48!5.86!NFATC4;;chr1:151032922..151032951,+!p2@MLLT11!0.48!3.90!MLLT11;;chr19:13136130..13136165,+!p6@NFIX!0.48!2.93!NFIX;;chr14:21566731..21566836,-!p1@ZNF219!0.47!28.30!ZNF219;;chr6:130339710..130339745,+!p1@L3MBTL3!0.47!20.98!L3MBTL3;;chr1:151032833..151032850,+!p3@MLLT11!0.47!5.37!MLLT11;;chr2:71127699..71127744,+!p1@VAX2!0.47!4.88!VAX2;;chr9:42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848..106330859,+!p5@ZFPM2!0.17!0.49!ZFPM2;;chr8:11534512..11534519,+!p7@GATA4!0.17!0.49!GATA4;;chr8:123793536..123793548,+!p13@ZHX2!0.17!0.49!ZHX2;;chr8:123793688..123793703,+!p12@ZHX2!0.17!0.49!ZHX2;;chr8:128747729..128747748,+!p14@MYC!0.17!0.49!MYC;;chr8:128750164..128750173,+!p24@MYC!0.17!0.49!MYC;;chr8:25902876..25902936,-!p1@EBF2!0.17!0.49!EBF2;;chr8:42698292..42698321,-!p8@THAP1!0.17!0.49!THAP1;;chr8:42698383..42698394,-!p5@THAP1!0.17!0.49!THAP1;;chr8:49834430..49834446,-!p5@SNAI2!0.17!0.49!SNAI2;;chr8:57123898..57123909,-!p3@PLAG1!0.17!0.49!PLAG1;;chr8:72756380..72756427,-!p8@MSC!0.17!0.49!MSC;;chr8:77593448..77593471,+!p2@ZFHX4!0.17!0.49!ZFHX4;;chr8:77596014..77596033,+!p6@ZFHX4!0.17!0.49!ZFHX4;;chr8:93031384..93031395,-!p34@RUNX1T1!0.17!0.49!RUNX1T1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.17!0.49!RUNX1T1;;chr8:93074872..93074884,-!p10@RUNX1T1!0.17!0.49!RUNX1T1;;chr9:100615499..100615519,+!p1@FOXE1!0.17!0.49!FOXE1;;chr9:100615546..100615558,+!p4@FOXE1!0.17!0.49!FOXE1;;chr19:38183166..38183184,-!p3@ZNF781!0.17!0.49!ZNF781;;chr19:45254481..45254495,+!p13@BCL3!0.17!0.49!BCL3;;chr19:45579699..45579704,-!p3@ZNF296!0.17!0.49!ZNF296;;chr19:50529329..50529340,+!p6@ZNF473!0.17!0.49!ZNF473;;chr19:9609247..9609262,-!p2@ZNF560!0.17!0.49!ZNF560;;chr1:14026722..14026733,+!p5@PRDM2!0.17!0.49!PRDM2;;chr1:158985457..158985468,+!p12@IFI16!0.17!0.49!IFI16;;chr1:161014760..161014788,-!p4@USF1!0.17!0.49!USF1;;chr1:164529004..164529015,+!p15@PBX1!0.17!0.49!PBX1;;chr1:170632108..170632114,+!p29@PRRX1!0.17!0.49!PRRX1;;chr1:170632310..170632321,+!p15@PRRX1!0.17!0.49!PRRX1;;chr1:170632527..170632533,+!p32@PRRX1!0.17!0.49!PRRX1;;chr1:170632867..170632878,+!p21@PRRX1!0.17!0.49!PRRX1;;chr1:197886461..197886558,+!p1@LHX9!0.17!0.49!LHX9;;chr1:197886617..197886628,+!p8@LHX9!0.17!0.49!LHX9;;chr1:202736110..202736120,-!p9@KDM5B!0.17!0.49!KDM5B;;chr1:221053526..221053540,+!p13@HLX!0.17!0.49!HLX;;chr1:37947257..37947292,+!p4@ZC3H12A!0.17!0.49!ZC3H12A;;chr1:42384322..42384336,-!p5@HIVEP3!0.17!0.49!HIVEP3;;chr1:42384343..42384380,-!p4@HIVEP3!0.17!0.49!HIVEP3;;chr1:42801540..42801562,-!p4@FOXJ3!0.17!0.49!FOXJ3;;chr1:43162358..43162369,+!p11@YBX1!0.17!0.49!YBX1;;chr1:44513995..44514031,+!p1@KLF17!0.17!0.49!KLF17;;chr1:92951607..92951661,-!p1@GFI1!0.17!0.49!GFI1;;chr20:42544761..42544775,+!p6@TOX2!0.17!0.49!TOX2;;chr20:42544782..42544828,+!p4@TOX2!0.17!0.49!TOX2;;chr20:48808064..48808086,+!p15@CEBPB!0.17!0.49!CEBPB;;chr20:48808672..48808680,+!p26@CEBPB!0.17!0.49!CEBPB;;chr20:48808740..48808743,+!p25@CEBPB!0.17!0.49!CEBPB;;chr20:50179334..50179343,-!p3@NFATC2!0.17!0.49!NFATC2;;chr20:50721788..50721799,-!p8@ZFP64!0.17!0.49!ZFP64;;chr20:50722202..50722217,-!p7@ZFP64!0.17!0.49!ZFP64;;chr21:30673091..30673135,+!p7@BACH1!0.17!0.49!BACH1;;chr21:36421401..36421414,-!p16@RUNX1!0.17!0.49!RUNX1;;chr21:38071778..38071790,+!p9@SIM2!0.17!0.49!SIM2;;chr15:57211318..57211355,+!p10@TCF12!0.17!0.49!TCF12;;chr15:67458491..67458505,+!p18@SMAD3!0.17!0.49!SMAD3;;chr15:67458836..67458859,+!p22@SMAD3!0.17!0.49!SMAD3;;chr15:80843472..80843480,+!p22@ARNT2!0.17!0.49!ARNT2;;chr15:80843484..80843499,+!p5@ARNT2!0.17!0.49!ARNT2;;chr15:96877425..96877441,+!p32@NR2F2!0.17!0.49!NR2F2;;chr16:30538376..30538386,-!p8@ZNF768!0.17!0.49!ZNF768;;chr16:30616269..30616287,-!p8@ZNF689!0.17!0.49!ZNF689;;chr16:31076273..31076288,-!p11@ZNF668!0.17!0.49!ZNF668;;chr16:51185172..51185197,-!p1@SALL1!0.17!0.49!SALL1;;chr16:54319010..54319041,-!p8@IRX3!0.17!0.49!IRX3;;chr16:86600458..86600461,+!p3@FOXC2!0.17!0.49!FOXC2;;chr16:86612046..86612065,+!p3@FOXL1!0.17!0.49!FOXL1;;chr16:8963020..8963054,-!p6@CARHSP1!0.17!0.49!CARHSP1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.17!0.49!SEBOX;;chr17:38501500..38501517,+!p13@RARA!0.17!0.49!RARA;;chr17:40440359..40440386,+!p4@STAT5A!0.17!0.49!STAT5A;;chr17:41622982..41623001,-!p11@ETV4!0.17!0.49!ETV4;;chr17:41739283..41739297,-!p1@MEOX1!0.17!0.49!MEOX1;;chr17:46671108..46671147,-!p1@HOXB5!0.17!0.49!HOXB5;;chr17:46675344..46675355,-!p9@HOXB6!0.17!0.49!HOXB6;;chr17:46675469..46675481,-!p4@HOXB6!0.17!0.49!HOXB6;;chr17:46675586..46675600,-!p6@HOXB6!0.17!0.49!HOXB6;;chr17:46688310..46688323,-!p4@HOXB7!0.17!0.49!HOXB7;;chr17:46692318..46692362,-!p5@HOXB8!0.17!0.49!HOXB8;;chr17:4981535..4981551,+!p2@ZFP3!0.17!0.49!ZFP3;;chr17:4981570..4981591,+!p3@ZFP3!0.17!0.49!ZFP3;;chr17:7387459..7387470,-!p10@ZBTB4!0.17!0.49!ZBTB4;;chr17:7387478..7387483,-!p17@ZBTB4!0.17!0.49!ZBTB4;;chr17:7387486..7387497,-!p11@ZBTB4!0.17!0.49!ZBTB4;;chr18:32870122..32870133,-!p2@ZSCAN30!0.17!0.49!ZSCAN30;;chr18:42646649..42646652,+!p9@SETBP1!0.17!0.49!SETBP1;;chr18:46477326..46477341,-!p2@SMAD7!0.17!0.49!SMAD7;;chr18:52894476..52894484,-!p41@TCF4!0.17!0.49!TCF4;;chr18:53068893..53068902,-!p28@TCF4!0.17!0.49!TCF4;;chr18:53068982..53068993,-!p20@TCF4!0.17!0.49!TCF4;;chr18:53254728..53254740,-!p79@TCF4!0.17!0.49!TCF4;;chr19:12267492..12267505,-!p2@ZNF625,p3@ZNF20!0.17!0.49!ZNF625;;chr19:12734557..12734565,+!p4@ZNF791!0.17!0.49!ZNF791;;chr19:13135832..13135853,+!p16@NFIX!0.17!0.49!NFIX;;chr1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+|ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000514
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:12750-136A5: Difference between revisions

From FANTOM5_SSTAR

Revision as of 23:08, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0