FFCP PHASE1:Hg19::chr2:242509651..242509655,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002321!3.11e-12!248;CL:0000220!4.26e-12!246;CL:0000066!2.49e-11!254;CL:0000222!5.33e-09!119;CL:0000213!6.27e-09!57;CL:0000215!6.27e-09!57;CL:0002139!5.91e-08!24;CL:0002078!1.31e-07!44;CL:0000115!1.58e-07!35 | |ontology_enrichment_celltype=CL:0002321!3.11e-12!248;CL:0000220!4.26e-12!246;CL:0000066!2.49e-11!254;CL:0000222!5.33e-09!119;CL:0000213!6.27e-09!57;CL:0000215!6.27e-09!57;CL:0002139!5.91e-08!24;CL:0002078!1.31e-07!44;CL:0000115!1.58e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000115;7.11e-08;36!CL:0002139;7.32e-08;24 | |ontology_enrichment_celltype_v019=CL:0000115;7.11e-08;36!CL:0002139;7.32e-08;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.33e-09,36;CL:0002139,6.17e-08,24;CL:0002078,1.23e-07,45;CL:0000213,3.62e-07,58;CL:0000215,3.62e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.91e-22!241;UBERON:0000477!2.50e-22!286;UBERON:0000483!3.23e-21!309;UBERON:0000119!5.18e-21!312;UBERON:0000025!2.44e-20!194;UBERON:0000475!1.66e-16!365;UBERON:0000064!3.92e-13!219;UBERON:0000468!3.46e-12!659;UBERON:0001049!1.28e-11!57;UBERON:0005068!1.28e-11!57;UBERON:0006241!1.28e-11!57;UBERON:0007135!1.28e-11!57;UBERON:0000481!3.57e-11!347;UBERON:0000467!3.94e-11!625;UBERON:0000480!6.30e-11!626;UBERON:0002616!9.17e-11!59;UBERON:0003914!3.23e-10!118;UBERON:0001017!8.25e-09!82;UBERON:0003075!1.11e-08!86;UBERON:0007284!1.11e-08!86;UBERON:0005743!1.17e-08!86;UBERON:0002049!1.60e-08!79;UBERON:0007798!1.60e-08!79;UBERON:0002020!2.35e-08!34;UBERON:0003528!2.35e-08!34;UBERON:0000955!2.47e-08!69;UBERON:0006238!2.47e-08!69;UBERON:0002100!3.75e-08!216;UBERON:0001893!3.99e-08!34;UBERON:0000033!4.22e-08!123;UBERON:0003080!4.25e-08!42;UBERON:0000055!6.39e-08!69;UBERON:0002791!6.87e-08!33;UBERON:0005256!8.09e-08!143;UBERON:0002780!9.31e-08!41;UBERON:0001890!9.31e-08!41;UBERON:0006240!9.31e-08!41;UBERON:0002346!1.31e-07!90;UBERON:0000922!1.38e-07!612;UBERON:0000490!2.62e-07!138;UBERON:0000073!3.05e-07!94;UBERON:0001016!3.05e-07!94;UBERON:0001869!4.49e-07!32;UBERON:0000153!4.54e-07!129;UBERON:0007811!4.54e-07!129;UBERON:0002050!5.85e-07!605;UBERON:0005423!5.85e-07!605;UBERON:0000923!7.96e-07!604;UBERON:0005291!7.96e-07!604;UBERON:0006598!7.96e-07!604;UBERON:0002532!7.96e-07!604;UBERON:0003056!8.30e-07!61 | |ontology_enrichment_uberon=UBERON:0004111!1.91e-22!241;UBERON:0000477!2.50e-22!286;UBERON:0000483!3.23e-21!309;UBERON:0000119!5.18e-21!312;UBERON:0000025!2.44e-20!194;UBERON:0000475!1.66e-16!365;UBERON:0000064!3.92e-13!219;UBERON:0000468!3.46e-12!659;UBERON:0001049!1.28e-11!57;UBERON:0005068!1.28e-11!57;UBERON:0006241!1.28e-11!57;UBERON:0007135!1.28e-11!57;UBERON:0000481!3.57e-11!347;UBERON:0000467!3.94e-11!625;UBERON:0000480!6.30e-11!626;UBERON:0002616!9.17e-11!59;UBERON:0003914!3.23e-10!118;UBERON:0001017!8.25e-09!82;UBERON:0003075!1.11e-08!86;UBERON:0007284!1.11e-08!86;UBERON:0005743!1.17e-08!86;UBERON:0002049!1.60e-08!79;UBERON:0007798!1.60e-08!79;UBERON:0002020!2.35e-08!34;UBERON:0003528!2.35e-08!34;UBERON:0000955!2.47e-08!69;UBERON:0006238!2.47e-08!69;UBERON:0002100!3.75e-08!216;UBERON:0001893!3.99e-08!34;UBERON:0000033!4.22e-08!123;UBERON:0003080!4.25e-08!42;UBERON:0000055!6.39e-08!69;UBERON:0002791!6.87e-08!33;UBERON:0005256!8.09e-08!143;UBERON:0002780!9.31e-08!41;UBERON:0001890!9.31e-08!41;UBERON:0006240!9.31e-08!41;UBERON:0002346!1.31e-07!90;UBERON:0000922!1.38e-07!612;UBERON:0000490!2.62e-07!138;UBERON:0000073!3.05e-07!94;UBERON:0001016!3.05e-07!94;UBERON:0001869!4.49e-07!32;UBERON:0000153!4.54e-07!129;UBERON:0007811!4.54e-07!129;UBERON:0002050!5.85e-07!605;UBERON:0005423!5.85e-07!605;UBERON:0000923!7.96e-07!604;UBERON:0005291!7.96e-07!604;UBERON:0006598!7.96e-07!604;UBERON:0002532!7.96e-07!604;UBERON:0003056!8.30e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.11e-09;34!UBERON:0002780;4.15e-09;41!UBERON:0001890;4.15e-09;41!UBERON:0003528;1.81e-08;34!UBERON:0002020;1.81e-08;34!UBERON:0000073;1.84e-08;53!UBERON:0002616;1.84e-08;53!UBERON:0002791;5.70e-08;32!UBERON:0001869;5.91e-08;32 | |ontology_enrichment_uberon_v019=UBERON:0001893;4.11e-09;34!UBERON:0002780;4.15e-09;41!UBERON:0001890;4.15e-09;41!UBERON:0003528;1.81e-08;34!UBERON:0002020;1.81e-08;34!UBERON:0000073;1.84e-08;53!UBERON:0002616;1.84e-08;53!UBERON:0002791;5.70e-08;32!UBERON:0001869;5.91e-08;32 | ||
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| ||
|short_description=p@chr2:242509651..242509655,+ | |short_description=p@chr2:242509651..242509655,+ | ||
}} | }} |
Revision as of 08:31, 18 November 2012
Short description: | p@chr2:242509651..242509655, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:242509651..242509655, + |
Coexpression cluster: | C4213_Placental_Alveolar_Mesenchymal_Endothelial_substantia_optic_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.33e-09 | 36 |
endothelial cell of vascular tree | 6.17e-08 | 24 |
meso-epithelial cell | 1.23e-07 | 45 |
lining cell | 3.62e-07 | 58 |
barrier cell | 3.62e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.15e-15 | 240 |
tube | 4.30e-15 | 192 |
epithelium | 9.66e-14 | 306 |
regional part of nervous system | 1.40e-13 | 53 |
regional part of brain | 1.40e-13 | 53 |
neural tube | 1.68e-13 | 56 |
neural rod | 1.68e-13 | 56 |
future spinal cord | 1.68e-13 | 56 |
neural keel | 1.68e-13 | 56 |
cell layer | 2.53e-13 | 309 |
ecto-epithelium | 1.57e-11 | 104 |
neural plate | 2.54e-11 | 82 |
presumptive neural plate | 2.54e-11 | 82 |
structure with developmental contribution from neural crest | 1.28e-10 | 132 |
neurectoderm | 3.02e-10 | 86 |
regional part of forebrain | 4.00e-10 | 41 |
forebrain | 4.00e-10 | 41 |
anterior neural tube | 4.00e-10 | 41 |
future forebrain | 4.00e-10 | 41 |
brain grey matter | 8.06e-10 | 34 |
gray matter | 8.06e-10 | 34 |
brain | 8.13e-10 | 68 |
future brain | 8.13e-10 | 68 |
telencephalon | 1.73e-09 | 34 |
central nervous system | 1.11e-08 | 81 |
pre-chordal neural plate | 1.95e-08 | 61 |
regional part of telencephalon | 2.41e-08 | 32 |
cerebral hemisphere | 6.59e-08 | 32 |
nervous system | 1.48e-07 | 89 |
ectoderm-derived structure | 2.40e-07 | 171 |
ectoderm | 2.40e-07 | 171 |
presumptive ectoderm | 2.40e-07 | 171 |
vessel | 4.86e-07 | 68 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.