FFCP PHASE1:Mm9::chr19:46574657..46574687,+: Difference between revisions
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|id=chr19:46574657..46574687,+ | |id=chr19:46574657..46574687,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.96e-16!43;CL:0000221!3.71e-15!44;CL:0000133!3.71e-15!44;CL:0000055!5.38e-14!50;CL:0000540!2.49e-12!33;CL:0000047!2.49e-12!33;CL:0000031!2.49e-12!33;CL:0000404!2.49e-12!33;CL:0000117!2.24e-11!23;CL:0000337!2.24e-11!23;CL:0000393!4.54e-10!39;CL:0000211!4.54e-10!39;CL:0002371!1.34e-09!118;CL:0000548!2.60e-09!115;CL:0000004!2.60e-09!115;CL:0000255!2.60e-09!115;CL:0002321!3.68e-09!70;CL:0000220!3.68e-09!70;CL:0000144!4.35e-09!121;CL:0000012!4.35e-09!121;CL:0000723!4.97e-09!91;CL:0000048!4.97e-09!91;CL:0000034!1.33e-07!97 | |ontology_enrichment_celltype=CL:0002319!3.96e-16!43;CL:0000221!3.71e-15!44;CL:0000133!3.71e-15!44;CL:0000055!5.38e-14!50;CL:0000540!2.49e-12!33;CL:0000047!2.49e-12!33;CL:0000031!2.49e-12!33;CL:0000404!2.49e-12!33;CL:0000117!2.24e-11!23;CL:0000337!2.24e-11!23;CL:0000393!4.54e-10!39;CL:0000211!4.54e-10!39;CL:0002371!1.34e-09!118;CL:0000548!2.60e-09!115;CL:0000004!2.60e-09!115;CL:0000255!2.60e-09!115;CL:0002321!3.68e-09!70;CL:0000220!3.68e-09!70;CL:0000144!4.35e-09!121;CL:0000012!4.35e-09!121;CL:0000723!4.97e-09!91;CL:0000048!4.97e-09!91;CL:0000034!1.33e-07!97 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.85e-16,43;CL:0000221,3.62e-15,44;CL:0000133,3.62e-15,44;CL:0000540,2.43e-12,33;CL:0000047,2.43e-12,33;CL:0000031,2.43e-12,33;CL:0000404,2.43e-12,33;CL:0000117,2.20e-11,23;CL:0000337,2.20e-11,23;CL:0000393,4.42e-10,39;CL:0000211,4.42e-10,39;CL:0002321,2.87e-09,70;CL:0000723,3.65e-09,91;CL:0000048,3.65e-09,91;CL:0000034,1.09e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.62e-21!75;UBERON:0001016!7.62e-21!75;UBERON:0001017!3.34e-20!73;UBERON:0005743!3.34e-20!73;UBERON:0002020!3.50e-15!34;UBERON:0001049!7.99e-15!52;UBERON:0005068!7.99e-15!52;UBERON:0006241!7.99e-15!52;UBERON:0007135!7.99e-15!52;UBERON:0002346!1.06e-14!71;UBERON:0003075!1.06e-14!71;UBERON:0007284!1.06e-14!71;UBERON:0004121!7.85e-14!102;UBERON:0000924!7.85e-14!102;UBERON:0006601!7.85e-14!102;UBERON:0003056!2.15e-13!49;UBERON:0002780!1.94e-12!39;UBERON:0001890!1.94e-12!39;UBERON:0006240!1.94e-12!39;UBERON:0002791!2.85e-12!29;UBERON:0003528!2.85e-12!29;UBERON:0001893!2.85e-12!29;UBERON:0003080!3.45e-12!40;UBERON:0000955!3.71e-12!50;UBERON:0006238!3.71e-12!50;UBERON:0002616!7.77e-12!49;UBERON:0000033!1.72e-11!63;UBERON:0000956!1.71e-10!21;UBERON:0001869!1.71e-10!21;UBERON:0000203!1.71e-10!21;UBERON:0007811!4.46e-09!86;UBERON:0000153!7.60e-09!94;UBERON:0002619!2.18e-08!17 | |ontology_enrichment_uberon=UBERON:0000073!7.62e-21!75;UBERON:0001016!7.62e-21!75;UBERON:0001017!3.34e-20!73;UBERON:0005743!3.34e-20!73;UBERON:0002020!3.50e-15!34;UBERON:0001049!7.99e-15!52;UBERON:0005068!7.99e-15!52;UBERON:0006241!7.99e-15!52;UBERON:0007135!7.99e-15!52;UBERON:0002346!1.06e-14!71;UBERON:0003075!1.06e-14!71;UBERON:0007284!1.06e-14!71;UBERON:0004121!7.85e-14!102;UBERON:0000924!7.85e-14!102;UBERON:0006601!7.85e-14!102;UBERON:0003056!2.15e-13!49;UBERON:0002780!1.94e-12!39;UBERON:0001890!1.94e-12!39;UBERON:0006240!1.94e-12!39;UBERON:0002791!2.85e-12!29;UBERON:0003528!2.85e-12!29;UBERON:0001893!2.85e-12!29;UBERON:0003080!3.45e-12!40;UBERON:0000955!3.71e-12!50;UBERON:0006238!3.71e-12!50;UBERON:0002616!7.77e-12!49;UBERON:0000033!1.72e-11!63;UBERON:0000956!1.71e-10!21;UBERON:0001869!1.71e-10!21;UBERON:0000203!1.71e-10!21;UBERON:0007811!4.46e-09!86;UBERON:0000153!7.60e-09!94;UBERON:0002619!2.18e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.34e-21,75;UBERON:0001017,3.23e-20,73;UBERON:0002346,2.19e-16,64;UBERON:0003075,2.19e-16,64;UBERON:0007284,2.19e-16,64;UBERON:0002020,3.41e-15,34;UBERON:0004121,6.94e-15,95;UBERON:0000924,6.94e-15,95;UBERON:0006601,6.94e-15,95;UBERON:0001049,7.78e-15,52;UBERON:0005068,7.78e-15,52;UBERON:0006241,7.78e-15,52;UBERON:0007135,7.78e-15,52;UBERON:0000073,1.47e-14,54;UBERON:0003056,2.30e-13,49;UBERON:0002780,1.90e-12,39;UBERON:0001890,1.90e-12,39;UBERON:0006240,1.90e-12,39;UBERON:0000955,1.95e-12,47;UBERON:0006238,1.95e-12,47;UBERON:0003528,2.80e-12,29;UBERON:0002791,2.80e-12,29;UBERON:0001893,2.80e-12,29;UBERON:0003080,3.38e-12,40;UBERON:0002616,4.10e-12,46;UBERON:0010371,5.10e-11,73;UBERON:0000956,1.68e-10,21;UBERON:0001869,1.68e-10,21;UBERON:0000203,1.68e-10,21;UBERON:0010314,1.98e-08,92;UBERON:0002619,2.15e-08,17 | |||
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| ||
|short_description=p@chr19:46574657..46574687,+ | |short_description=p@chr19:46574657..46574687,+ | ||
}} | }} |
Revision as of 18:57, 13 November 2012
Short description: | p@chr19:46574657..46574687, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:46574657..46574687, + |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.85e-16 | 43 |
ectodermal cell | 3.62e-15 | 44 |
neurectodermal cell | 3.62e-15 | 44 |
neuron | 2.43e-12 | 33 |
neuronal stem cell | 2.43e-12 | 33 |
neuroblast | 2.43e-12 | 33 |
electrically signaling cell | 2.43e-12 | 33 |
CNS neuron (sensu Vertebrata) | 2.20e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.20e-11 | 23 |
electrically responsive cell | 4.42e-10 | 39 |
electrically active cell | 4.42e-10 | 39 |
embryonic cell | 2.87e-09 | 70 |
somatic stem cell | 3.65e-09 | 91 |
multi fate stem cell | 3.65e-09 | 91 |
stem cell | 1.09e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.34e-21 | 75 |
central nervous system | 3.23e-20 | 73 |
neurectoderm | 2.19e-16 | 64 |
neural plate | 2.19e-16 | 64 |
presumptive neural plate | 2.19e-16 | 64 |
gray matter | 3.41e-15 | 34 |
ectoderm-derived structure | 6.94e-15 | 95 |
ectoderm | 6.94e-15 | 95 |
presumptive ectoderm | 6.94e-15 | 95 |
neural tube | 7.78e-15 | 52 |
neural rod | 7.78e-15 | 52 |
future spinal cord | 7.78e-15 | 52 |
neural keel | 7.78e-15 | 52 |
regional part of nervous system | 1.47e-14 | 54 |
pre-chordal neural plate | 2.30e-13 | 49 |
regional part of forebrain | 1.90e-12 | 39 |
forebrain | 1.90e-12 | 39 |
future forebrain | 1.90e-12 | 39 |
brain | 1.95e-12 | 47 |
future brain | 1.95e-12 | 47 |
brain grey matter | 2.80e-12 | 29 |
regional part of telencephalon | 2.80e-12 | 29 |
telencephalon | 2.80e-12 | 29 |
anterior neural tube | 3.38e-12 | 40 |
regional part of brain | 4.10e-12 | 46 |
ecto-epithelium | 5.10e-11 | 73 |
cerebral cortex | 1.68e-10 | 21 |
cerebral hemisphere | 1.68e-10 | 21 |
pallium | 1.68e-10 | 21 |
structure with developmental contribution from neural crest | 1.98e-08 | 92 |
regional part of cerebral cortex | 2.15e-08 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.