FFCP PHASE1:Mm9::chr9:75161940..75162017,+: Difference between revisions
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|id=chr9:75161940..75162017,+ | |id=chr9:75161940..75162017,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.21e-15!44;CL:0000133!3.21e-15!44;CL:0000055!5.54e-15!50;CL:0002319!9.40e-15!43;CL:0000393!8.46e-14!39;CL:0000211!8.46e-14!39;CL:0000540!1.09e-12!33;CL:0000047!1.09e-12!33;CL:0000031!1.09e-12!33;CL:0000404!1.09e-12!33;CL:0000117!9.73e-11!23;CL:0000337!9.73e-11!23;CL:0002321!1.95e-10!70;CL:0000220!1.95e-10!70 | |ontology_enrichment_celltype=CL:0000221!3.21e-15!44;CL:0000133!3.21e-15!44;CL:0000055!5.54e-15!50;CL:0002319!9.40e-15!43;CL:0000393!8.46e-14!39;CL:0000211!8.46e-14!39;CL:0000540!1.09e-12!33;CL:0000047!1.09e-12!33;CL:0000031!1.09e-12!33;CL:0000404!1.09e-12!33;CL:0000117!9.73e-11!23;CL:0000337!9.73e-11!23;CL:0002321!1.95e-10!70;CL:0000220!1.95e-10!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.09e-15,44;CL:0000133,3.09e-15,44;CL:0002319,9.08e-15,43;CL:0000393,8.19e-14,39;CL:0000211,8.19e-14,39;CL:0000540,1.06e-12,33;CL:0000047,1.06e-12,33;CL:0000031,1.06e-12,33;CL:0000404,1.06e-12,33;CL:0000117,9.50e-11,23;CL:0000337,9.50e-11,23;CL:0002321,1.86e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.41e-33!102;UBERON:0000924!1.41e-33!102;UBERON:0006601!1.41e-33!102;UBERON:0001017!1.67e-33!73;UBERON:0005743!1.67e-33!73;UBERON:0000073!7.19e-33!75;UBERON:0001016!7.19e-33!75;UBERON:0002346!2.16e-29!71;UBERON:0003075!2.16e-29!71;UBERON:0007284!2.16e-29!71;UBERON:0000033!1.28e-25!63;UBERON:0001049!2.10e-24!52;UBERON:0005068!2.10e-24!52;UBERON:0006241!2.10e-24!52;UBERON:0007135!2.10e-24!52;UBERON:0000955!9.67e-24!50;UBERON:0006238!9.67e-24!50;UBERON:0002616!5.31e-23!49;UBERON:0003056!2.68e-20!49;UBERON:0003080!3.29e-18!40;UBERON:0002780!1.38e-17!39;UBERON:0001890!1.38e-17!39;UBERON:0006240!1.38e-17!39;UBERON:0002020!3.52e-17!34;UBERON:0002791!2.10e-14!29;UBERON:0003528!2.10e-14!29;UBERON:0001893!2.10e-14!29;UBERON:0007811!1.09e-10!86;UBERON:0000956!3.36e-10!21;UBERON:0001869!3.36e-10!21;UBERON:0000203!3.36e-10!21;UBERON:0002619!2.06e-09!17;UBERON:0004111!2.75e-09!122;UBERON:0000025!3.04e-09!114;UBERON:0000153!3.08e-09!94;UBERON:0002021!2.20e-07!10;UBERON:0000411!2.20e-07!10;UBERON:0001950!2.20e-07!10;UBERON:0003076!8.58e-07!12;UBERON:0003057!8.58e-07!12 | |ontology_enrichment_uberon=UBERON:0004121!1.41e-33!102;UBERON:0000924!1.41e-33!102;UBERON:0006601!1.41e-33!102;UBERON:0001017!1.67e-33!73;UBERON:0005743!1.67e-33!73;UBERON:0000073!7.19e-33!75;UBERON:0001016!7.19e-33!75;UBERON:0002346!2.16e-29!71;UBERON:0003075!2.16e-29!71;UBERON:0007284!2.16e-29!71;UBERON:0000033!1.28e-25!63;UBERON:0001049!2.10e-24!52;UBERON:0005068!2.10e-24!52;UBERON:0006241!2.10e-24!52;UBERON:0007135!2.10e-24!52;UBERON:0000955!9.67e-24!50;UBERON:0006238!9.67e-24!50;UBERON:0002616!5.31e-23!49;UBERON:0003056!2.68e-20!49;UBERON:0003080!3.29e-18!40;UBERON:0002780!1.38e-17!39;UBERON:0001890!1.38e-17!39;UBERON:0006240!1.38e-17!39;UBERON:0002020!3.52e-17!34;UBERON:0002791!2.10e-14!29;UBERON:0003528!2.10e-14!29;UBERON:0001893!2.10e-14!29;UBERON:0007811!1.09e-10!86;UBERON:0000956!3.36e-10!21;UBERON:0001869!3.36e-10!21;UBERON:0000203!3.36e-10!21;UBERON:0002619!2.06e-09!17;UBERON:0004111!2.75e-09!122;UBERON:0000025!3.04e-09!114;UBERON:0000153!3.08e-09!94;UBERON:0002021!2.20e-07!10;UBERON:0000411!2.20e-07!10;UBERON:0001950!2.20e-07!10;UBERON:0003076!8.58e-07!12;UBERON:0003057!8.58e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.89e-36,92;UBERON:0001017,1.54e-33,73;UBERON:0001016,6.62e-33,75;UBERON:0004121,3.28e-31,95;UBERON:0000924,3.28e-31,95;UBERON:0006601,3.28e-31,95;UBERON:0002346,1.34e-27,64;UBERON:0003075,1.34e-27,64;UBERON:0007284,1.34e-27,64;UBERON:0000073,4.55e-26,54;UBERON:0010371,2.02e-25,73;UBERON:0001049,1.97e-24,52;UBERON:0005068,1.97e-24,52;UBERON:0006241,1.97e-24,52;UBERON:0007135,1.97e-24,52;UBERON:0000955,1.35e-21,47;UBERON:0006238,1.35e-21,47;UBERON:0002616,7.14e-21,46;UBERON:0003056,2.56e-20,49;UBERON:0003080,3.15e-18,40;UBERON:0002780,1.32e-17,39;UBERON:0001890,1.32e-17,39;UBERON:0006240,1.32e-17,39;UBERON:0002020,3.38e-17,34;UBERON:0003528,2.03e-14,29;UBERON:0002791,2.03e-14,29;UBERON:0001893,2.03e-14,29;UBERON:0000956,3.28e-10,21;UBERON:0001869,3.28e-10,21;UBERON:0000203,3.28e-10,21;UBERON:0002619,2.02e-09,17;UBERON:0004111,3.20e-09,122;UBERON:0000025,3.55e-09,114;UBERON:0002021,2.17e-07,10;UBERON:0000411,2.17e-07,10;UBERON:0001950,2.17e-07,10;UBERON:0003076,8.46e-07,12;UBERON:0003057,8.46e-07,12 | |||
|phase1_expression=14.0930985452219,15.3549179361319,20.9299650119187,13.3084252975005,16.5295590882295,3.18970616632591,4.67225281191051,4.00282302668886,1.267098499365,2.10658073689794,0,0.398860794976682,1.02720437958723,1.57356724354195,0,0.202475267389826,0,0.157731082679119,0.411343300817216,0.84877930359606,16.3283117090054,4.46809280403984,7.05239430675126,2.55987876469451,2.98232065387321,9.18771142584032,9.47676391549965,4.09395342103189,7.60093677825496,4.03248207615889,6.65191531965914,0.635030673459631,1.84519436275371,0,1.1554064790051,0.831173226792462,1.63335485009895,4.18531630736908,5.4693474116666,2.61761871986899,1.17646297606203,2.04913645487534,0.971020706062307,11.330713617802,13.1790010585369,12.114085642671,6.25913075478431,20.2763395433815,21.0898735425093,22.5538682926169,10.7789544651529,15.8127820801469,0.335565212115473,0,0.672187598284928,10.2903774414379,9.74213695791773,11.3447860301037,19.4223802425214,21.1596391708813,19.0149421051854,9.14880236586657,5.33576877666684,8.54904731417329,4.94433181283487,5.6838409195688,24.2676089519908,27.2794996778304,12.2353742524004,9.72042755988173,10.0955981448663,35.9920240348793,35.3389665522582,10.2892271340561,11.2139201091337,11.9498442259303,58.361416929676,47.2443150915195,46.5427795766418,18.7278528576875,21.1336456721566,11.9810075228055,47.4611098302348,57.4017862232314,46.9090620674807,28.8736013764194,31.6065131374009,26.0959224155421,2.49896437999507,11.638020256445,6.08715426273523,0.860423876981386,1.3599426674155,0.539703191637817,0.649776417447669,0,6.46044332606059,1.53387290320252,4.67614808285164,2.12003744706204,19.858922188512,10.2661181931454,10.1922095882658,7.11066703153331,6.49473123033642,4.05375784760158,3.53867111510348,6.16592950482924,0.517875767294343,19.5943623565569,8.50078101154066,11.5696881758614,10.6083128737787,11.4549206819993,10.4653949350777,17.0906564208359,1.23597483867187,7.80836527367523,2.65383165584962,6.79420769779119,6.40440403535141,5.81850303762267,7.45567044872489,51.8222010710438,53.1994635306176,1.78819938646014,1.07833612055328,1.79970819298022,0.635351135365324,38.7957756058491,47.1225620903185,21.7382029155255,39.1104720432622,48.0745059781021,39.0641523771973,43.6428997652268,9.16554274652847,6.71797641294502,7.07623723614289,9.04899980311838,11.1903580947925,13.7941262660084,10.0834792690996,12.5084998803643,11.4981683565744,11.5302348256365,12.7434345401231,18.3679393224701,4.31135985865684,5.48407632486676,6.862093842394,6.79506770525482,6.39508673218875,6.268538997399,5.55611768301447,6.36909653819178,0.702213187313235,1.28673953557358,0.852490498186778,12.4275463521301,8.67746421930056,14.2249028554202,13.7311946639422,14.3637889175605,14.3468414985262,18.835249524783,16.901224288176,13.5447797145917,16.455984991348,9.85004784474571,12.7278030986993,12.1345989563026,10.5384055339704,9.12603647570528,30.0714626446702,18.7286394530298,3.30418782983798,10.8424732332053,6.61193576659225,5.80591679651096,4.51036114627327,4.84040459096022,4.89231696458715,3.23383564391351,5.69434873853414,2.14108641141214,4.52403375840485,3.38226002469956,3.31438948102504,5.39291645192533,4.53889904736858,6.37252074413975,4.55202962287396,5.25543158004753,4.50830942692322,7.53509913027663,8.53390943537553,8.62670584650918,8.60016904889899,8.41377843483732,6.43694784149637,9.62497878590044,1.1858105083486,1.16791574001266,1.37591296579242,0.449724224769707,0.405720242777006,0.964708639009667,1.01850340712568,2.5892652370573,1.94562272130042,1.09824565275233,1.43768206527355,1.86070473834252,1.24815069245824,0.757736633841335,0.538192240565737,0.964887042726734,4.24932337383191,7.20067364727842,4.07412441105065,3.39490171550376,2.34690248288502,3.01511263395268,2.38043640886014,1.95133647857799,4.41378403497335,5.3151525515706,6.218735977642,3.60499292374624,3.9717545829156,3.90552458170081,0,2.17562273527484,0.983528546038072,3.03530420935206,32.431219177534,34.8118709178843,2.29508923527346,6.5642441073137,10.4117712407365,12.1036010731958,14.4333676480975,7.64700153448166,11.3627323782021,11.3230612315533,12.1443210502468,12.2747460322751,12.2539211163422,50.1261253618019,10.9293865610367,10.3278050127008,9.12166972380026,7.9185659026817,2.65490276679926,3.8844901784797,2.41858845571801,1.69744571780308,4.13422650033082,4.30409207121498,5.16856586336442,4.36240475373007,6.06045543254026,1.8962205476149,1.05418608574999,0,24.8520912200265,8.46287141947158,11.1248468053169,10.2881776815164,11.7044554203901,13.5560301377574,15.7967059778036,17.3545020995322,0.704015124191131,1.69465656691056,10.8058915046931,7.25499512942512,8.07322133479528,7.11692514152239,8.59480876822583,4.43180429311665,7.86998258900597,27.0720940935344,0.341741761595705,3.50857675537478,2.96311243791539,1.13021074202815,0.820165366326151,0.457556346413045,2.20971958992012,2.09927178485487,2.3493995546752,6.68269432610579,5.53587988766987,4.67634774391752,5.61627772273367,4.59994251231831,4.80397640241591,7.95699643670442,6.86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| ||
|short_description=p1@Gnb5 | |short_description=p1@Gnb5 | ||
}} | }} |
Revision as of 15:11, 14 November 2012
Short description: | p1@Gnb5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gnb5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -31bp_to_NM_138719, uc009qsb.1_5end |
EntrezGene: | Gnb5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.09e-15 | 44 |
neurectodermal cell | 3.09e-15 | 44 |
neural cell | 9.08e-15 | 43 |
electrically responsive cell | 8.19e-14 | 39 |
electrically active cell | 8.19e-14 | 39 |
neuron | 1.06e-12 | 33 |
neuronal stem cell | 1.06e-12 | 33 |
neuroblast | 1.06e-12 | 33 |
electrically signaling cell | 1.06e-12 | 33 |
CNS neuron (sensu Vertebrata) | 9.50e-11 | 23 |
neuroblast (sensu Vertebrata) | 9.50e-11 | 23 |
embryonic cell | 1.86e-10 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.