FFCP PHASE1:Mm9::chr16:90220953..90220970,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr16:90220953..90220970,+ | |id=chr16:90220953..90220970,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.65e-10!23;CL:0000337!1.65e-10!23;CL:0000393!6.30e-07!39;CL:0000211!6.30e-07!39 | |ontology_enrichment_celltype=CL:0000117!1.65e-10!23;CL:0000337!1.65e-10!23;CL:0000393!6.30e-07!39;CL:0000211!6.30e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-10,23;CL:0000337,1.43e-10,23;CL:0000393,5.95e-07,39;CL:0000211,5.95e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.41e-20!52;UBERON:0005068!6.41e-20!52;UBERON:0006241!6.41e-20!52;UBERON:0007135!6.41e-20!52;UBERON:0000955!2.07e-18!50;UBERON:0006238!2.07e-18!50;UBERON:0002616!6.73e-18!49;UBERON:0000033!1.13e-17!63;UBERON:0000073!1.34e-17!75;UBERON:0001016!1.34e-17!75;UBERON:0001017!2.31e-17!73;UBERON:0005743!2.31e-17!73;UBERON:0002020!3.51e-17!34;UBERON:0002346!6.34e-17!71;UBERON:0003075!6.34e-17!71;UBERON:0007284!6.34e-17!71;UBERON:0004121!1.54e-16!102;UBERON:0000924!1.54e-16!102;UBERON:0006601!1.54e-16!102;UBERON:0003080!4.78e-15!40;UBERON:0002780!2.18e-14!39;UBERON:0001890!2.18e-14!39;UBERON:0006240!2.18e-14!39;UBERON:0002791!2.99e-14!29;UBERON:0003528!2.99e-14!29;UBERON:0001893!2.99e-14!29;UBERON:0003056!1.89e-13!49;UBERON:0000956!1.39e-10!21;UBERON:0001869!1.39e-10!21;UBERON:0000203!1.39e-10!21;UBERON:0000025!2.63e-09!114;UBERON:0004111!4.27e-09!122;UBERON:0002619!1.53e-08!17;UBERON:0002021!1.56e-07!10;UBERON:0000411!1.56e-07!10;UBERON:0001950!1.56e-07!10 | |ontology_enrichment_uberon=UBERON:0001049!6.41e-20!52;UBERON:0005068!6.41e-20!52;UBERON:0006241!6.41e-20!52;UBERON:0007135!6.41e-20!52;UBERON:0000955!2.07e-18!50;UBERON:0006238!2.07e-18!50;UBERON:0002616!6.73e-18!49;UBERON:0000033!1.13e-17!63;UBERON:0000073!1.34e-17!75;UBERON:0001016!1.34e-17!75;UBERON:0001017!2.31e-17!73;UBERON:0005743!2.31e-17!73;UBERON:0002020!3.51e-17!34;UBERON:0002346!6.34e-17!71;UBERON:0003075!6.34e-17!71;UBERON:0007284!6.34e-17!71;UBERON:0004121!1.54e-16!102;UBERON:0000924!1.54e-16!102;UBERON:0006601!1.54e-16!102;UBERON:0003080!4.78e-15!40;UBERON:0002780!2.18e-14!39;UBERON:0001890!2.18e-14!39;UBERON:0006240!2.18e-14!39;UBERON:0002791!2.99e-14!29;UBERON:0003528!2.99e-14!29;UBERON:0001893!2.99e-14!29;UBERON:0003056!1.89e-13!49;UBERON:0000956!1.39e-10!21;UBERON:0001869!1.39e-10!21;UBERON:0000203!1.39e-10!21;UBERON:0000025!2.63e-09!114;UBERON:0004111!4.27e-09!122;UBERON:0002619!1.53e-08!17;UBERON:0002021!1.56e-07!10;UBERON:0000411!1.56e-07!10;UBERON:0001950!1.56e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.83e-21,54;UBERON:0001049,6.87e-20,52;UBERON:0005068,6.87e-20,52;UBERON:0006241,6.87e-20,52;UBERON:0007135,6.87e-20,52;UBERON:0001016,1.45e-17,75;UBERON:0001017,2.50e-17,73;UBERON:0002020,2.73e-17,34;UBERON:0010314,4.05e-17,92;UBERON:0000955,9.32e-17,47;UBERON:0006238,9.32e-17,47;UBERON:0002346,1.40e-16,64;UBERON:0003075,1.40e-16,64;UBERON:0007284,1.40e-16,64;UBERON:0002616,2.98e-16,46;UBERON:0010371,5.91e-16,73;UBERON:0004121,8.76e-16,95;UBERON:0000924,8.76e-16,95;UBERON:0006601,8.76e-16,95;UBERON:0003080,4.08e-15,40;UBERON:0002780,1.88e-14,39;UBERON:0001890,1.88e-14,39;UBERON:0006240,1.88e-14,39;UBERON:0003528,2.44e-14,29;UBERON:0002791,2.44e-14,29;UBERON:0001893,2.44e-14,29;UBERON:0003056,1.64e-13,49;UBERON:0000956,1.20e-10,21;UBERON:0001869,1.20e-10,21;UBERON:0000203,1.20e-10,21;UBERON:0000025,2.48e-09,114;UBERON:0004111,4.71e-09,122;UBERON:0002619,1.37e-08,17;UBERON:0002021,1.42e-07,10;UBERON:0000411,1.42e-07,10;UBERON:0001950,1.42e-07,10 | |||
|phase1_expression=4.96461426024861,1.39590163055744,1.81999695755814,1.81478526784098,1.50268718983904,0.503637815735669,0.233612640595526,0.258246646883153,0,0.468129052643987,0.171217968225505,0.398860794976682,0.342401459862411,0.524522414513984,0,2.02475267389826,1.39912375625629,0.473193248037357,0.548457734422955,0,5.10259740906419,0.695036658406197,0.522399578277871,0.95995453676044,1.14704640533585,1.14846392823004,1.29228598847722,0.646413698057667,0.760093677825496,1.51218077855958,2.66076612786366,0.635030673459631,1.23012957516914,0,1.44425809875637,1.82858109894342,0.612508068787107,0,1.5626706890476,0,0.588231488031014,0.683045484958446,0,2.7697299954627,3.54819259268301,2.56965453026354,0.782391344348039,2.18025156380447,2.41654801007919,3.88859798148567,1.95980990275508,1.43752564364972,0.671130424230945,0,0.672187598284928,4.3734104126111,3.15186783932632,3.6097046459421,4.85559506063035,5.81890077199236,3.1691570175309,1.35537812827653,2.66788438833342,1.7997994345628,2.96659908770092,0.7104801149461,2.39680088414724,2.30530983192933,5.28817022773236,7.42532660824299,6.94072372459561,11.1403883917483,8.39300455616131,3.91970557487853,2.97120960156533,1.83843757322004,4.40463523997555,10.5980490610706,7.68032666281217,4.61602007055678,2.92760459527711,5.2091337055676,16.1926139420801,9.00420176050688,6.26472815884921,8.83885756421003,8.11518580554887,6.15118171223492,2.65041676666144,2.87171928405785,5.2175607966302,0,3.39985666853875,1.61910957491345,1.94932925234301,0.448026887097336,2.94933282276679,3.74946709671727,2.59786004602869,3.88673531961374,2.67602497575693,1.28326477414318,0,0,1.94841936910093,1.77351905832569,3.0331466700887,2.2836775943812,0.258937883647172,2.9688427812965,1.73485326766136,4.56698217468212,2.7673859670727,3.76806601381556,1.05829836422134,3.14166478324189,0.741584903203122,2.02439099687876,0.884610551949874,3.558870698843,1.54589062922275,0,3.72783522436244,10.5401086924157,7.12118803165747,1.27728527604296,3.35482348616577,1.19980546198682,1.77898317902291,11.3840885947665,8.23501085073528,5.52879149296603,9.56033761057521,10.7400492078739,10.1816141834184,9.24775199486219,4.58277137326423,1.8661045591514,6.57079171927554,1.05220927943237,1.30120442962704,2.98872735763515,1.26043490863744,2.71268672104287,1.76894897793452,3.71529788826064,2.43624483855295,3.88055056108524,0.646703978798527,1.13463648100692,1.40760899331159,2.84954452155847,2.22437799380478,1.74126083261083,1.85203922767149,1.99034266818493,2.1066395619397,1.28673953557358,1.42081749697796,1.03562886267751,0.938104239924385,0.540186184383045,1.42046841351126,1.96764231747404,1.54267112887378,3.0229412817553,1.87791380979733,2.6856028744449,2.46839774870221,3.94001913789829,4.2155780963845,4.23979963533464,2.19550115291051,2.95254121272818,10.5144974282064,9.8788427884113,1.32167513193519,0.264450566663544,1.49301775374664,1.85789337488351,1.15980715189884,1.4117846723634,1.11189021922435,1.14135375667535,0.949058123089023,1.4822905925161,2.5133520880027,1.59165177632921,1.9496408711912,0.898819408654221,1.29682829924817,1.39398891278057,1.32767530667157,1.25673363870702,1.1270773567308,1.4255592949172,1.55161989734101,1.47285221769669,2.59269802209455,2.36176236767363,2.19798218977925,2.83813477020141,2.66807364378434,0.333690211432188,0.393117990226406,0.449724224769707,0.405720242777006,0.241177159752417,1.01850340712568,0,0.810676133875177,1.64736847912849,0,2.23284568601102,1.5601883655728,1.76805214562978,1.25578189465339,1.92977408545347,1.84753190166605,1.32643988239339,0.977789858652155,1.01847051465113,0.704070744865506,1.67506257441816,1.19021820443007,2.34160377429359,1.57635144106191,2.87904096543407,3.34855014180723,2.29408640602033,2.07221978239075,3.32692834737477,0,1.63171705145613,1.96705709207614,4.13905119457099,11.0779907091576,8.08760637486202,2.62295912602681,3.53459298086122,1.26203287766503,1.17131623288992,1.50796378412959,0.955875191810208,1.55959071857676,1.98153571552183,1.21443210502468,1.16902343164525,0,5.78378369559253,2.12910127812403,4.45164009168138,4.39794790254655,1.31976098378028,1.32745138339963,1.45668381692989,0.604647113929502,1.50884063804718,1.77181135728464,2.15204603560749,3.10113951801865,1.81766864738753,3.56497378384721,1.58018378967908,2.10837217149998,0,4.76615448055303,0.540183282093931,2.45781499187234,2.35770738534752,1.41872186913819,3.0322698992352,2.63278432963394,5.17590413494819,1.87737366450968,1.90648863777438,0.882113592219848,2.30840754118072,1.61464426695906,1.44751019827574,1.67121281604391,1.47726809770555,1.7488850197791,10.5692422145991,0.512612642393558,1.23832120777933,1.11116716421827,0.376736914009382,0.956859594047176,0.457556346413045,4.9293744698218,4.05859211738608,4.28419918793714,2.86401185404534,1.10717597753397,1.42323626988794,1.83609079397062,2.09088296014469,1.31017538247707,2.96701562046606,1.32245529160537,3.40282724579238,1.03691978633434,3.10669656543463,15.7834022831573,2.24274819065968,2.97825282822776,5.05573089694524,5.55387240954244,5.23763989021412,4.5769323071844,3.3853140059427,5.24296722128554,2.65742532908607,7.77681016896237,0.948033361884535,2.22997736819181,2.77319584345034,1.29920822977795,0.358053391334963,0.39736270956253,1.20195449519969,1.32920574457119,1.21159739937777,1.295515713135,0.604957110821043,0.682205165178267,0.288635524920988,0.584384510907845,2.72076460338254,1.55390167361845,1.70456327558004,1.00730769818447,1.9318959403219,1.50145980360946,3.6630324853453,1.2862102744744,1.00314420807073,8.471277639256,6.90487854760765,8.02053718815155,9.96748457593388,11.6464028361009,9.06472676867641,12.8254275044043,10.8077088773813,14.0474146785103,11.9084871702919,1.03787347584177,0.399024873401031,1.19513524027894,2.43106717068294,3.14419743941973,3.30918315210025,2.22246727801615,1.85431551515005,0.962757628775446,3.28506375292937,2.28131369901216,2.64076877940507,1.96647165686753,1.85672941974121,1.89537047553524,2.38146845641537,2.20180219295225,1.35036454324594,3.29668720642645,1.76638704161277,3.77156177623957,2.8396128985494,1.1921809497366,2.76158191601424,2.35273451038327,2.45382362885862,2.19513567447327,4.20911538300549,2.17286582153379,3.92799590160417,1.89816028998679,2.1670986122624,2.86461730218783,1.70430525304563,2.70069255373598,4.74640098082097,3.04111090979031,3.43793686477277,3.44318997723918,3.52946270591225,3.94175320554716 | |phase1_expression=4.96461426024861,1.39590163055744,1.81999695755814,1.81478526784098,1.50268718983904,0.503637815735669,0.233612640595526,0.258246646883153,0,0.468129052643987,0.171217968225505,0.398860794976682,0.342401459862411,0.524522414513984,0,2.02475267389826,1.39912375625629,0.473193248037357,0.548457734422955,0,5.10259740906419,0.695036658406197,0.522399578277871,0.95995453676044,1.14704640533585,1.14846392823004,1.29228598847722,0.646413698057667,0.760093677825496,1.51218077855958,2.66076612786366,0.635030673459631,1.23012957516914,0,1.44425809875637,1.82858109894342,0.612508068787107,0,1.5626706890476,0,0.588231488031014,0.683045484958446,0,2.7697299954627,3.54819259268301,2.56965453026354,0.782391344348039,2.18025156380447,2.41654801007919,3.88859798148567,1.95980990275508,1.43752564364972,0.671130424230945,0,0.672187598284928,4.3734104126111,3.15186783932632,3.6097046459421,4.85559506063035,5.81890077199236,3.1691570175309,1.35537812827653,2.66788438833342,1.7997994345628,2.96659908770092,0.7104801149461,2.39680088414724,2.30530983192933,5.28817022773236,7.42532660824299,6.94072372459561,11.1403883917483,8.39300455616131,3.91970557487853,2.97120960156533,1.83843757322004,4.40463523997555,10.5980490610706,7.68032666281217,4.61602007055678,2.92760459527711,5.2091337055676,16.1926139420801,9.00420176050688,6.26472815884921,8.83885756421003,8.11518580554887,6.15118171223492,2.65041676666144,2.87171928405785,5.2175607966302,0,3.39985666853875,1.61910957491345,1.94932925234301,0.448026887097336,2.94933282276679,3.74946709671727,2.59786004602869,3.88673531961374,2.67602497575693,1.28326477414318,0,0,1.94841936910093,1.77351905832569,3.0331466700887,2.2836775943812,0.258937883647172,2.9688427812965,1.73485326766136,4.56698217468212,2.7673859670727,3.76806601381556,1.05829836422134,3.14166478324189,0.741584903203122,2.02439099687876,0.884610551949874,3.558870698843,1.54589062922275,0,3.72783522436244,10.5401086924157,7.12118803165747,1.27728527604296,3.35482348616577,1.19980546198682,1.77898317902291,11.3840885947665,8.23501085073528,5.52879149296603,9.56033761057521,10.7400492078739,10.1816141834184,9.24775199486219,4.58277137326423,1.8661045591514,6.57079171927554,1.05220927943237,1.30120442962704,2.98872735763515,1.26043490863744,2.71268672104287,1.76894897793452,3.71529788826064,2.43624483855295,3.88055056108524,0.646703978798527,1.13463648100692,1.40760899331159,2.84954452155847,2.22437799380478,1.74126083261083,1.85203922767149,1.99034266818493,2.1066395619397,1.28673953557358,1.42081749697796,1.03562886267751,0.938104239924385,0.540186184383045,1.42046841351126,1.96764231747404,1.54267112887378,3.0229412817553,1.87791380979733,2.6856028744449,2.46839774870221,3.94001913789829,4.2155780963845,4.23979963533464,2.19550115291051,2.95254121272818,10.5144974282064,9.8788427884113,1.32167513193519,0.264450566663544,1.49301775374664,1.85789337488351,1.15980715189884,1.4117846723634,1.11189021922435,1.14135375667535,0.949058123089023,1.4822905925161,2.5133520880027,1.59165177632921,1.9496408711912,0.898819408654221,1.29682829924817,1.39398891278057,1.32767530667157,1.25673363870702,1.1270773567308,1.4255592949172,1.55161989734101,1.47285221769669,2.59269802209455,2.36176236767363,2.19798218977925,2.83813477020141,2.66807364378434,0.333690211432188,0.393117990226406,0.449724224769707,0.405720242777006,0.241177159752417,1.01850340712568,0,0.810676133875177,1.64736847912849,0,2.23284568601102,1.5601883655728,1.76805214562978,1.25578189465339,1.92977408545347,1.84753190166605,1.32643988239339,0.977789858652155,1.01847051465113,0.704070744865506,1.67506257441816,1.19021820443007,2.34160377429359,1.57635144106191,2.87904096543407,3.34855014180723,2.29408640602033,2.07221978239075,3.32692834737477,0,1.63171705145613,1.96705709207614,4.13905119457099,11.0779907091576,8.08760637486202,2.62295912602681,3.53459298086122,1.26203287766503,1.17131623288992,1.50796378412959,0.955875191810208,1.55959071857676,1.98153571552183,1.21443210502468,1.16902343164525,0,5.78378369559253,2.12910127812403,4.45164009168138,4.39794790254655,1.31976098378028,1.32745138339963,1.45668381692989,0.604647113929502,1.50884063804718,1.77181135728464,2.15204603560749,3.10113951801865,1.81766864738753,3.56497378384721,1.58018378967908,2.10837217149998,0,4.76615448055303,0.540183282093931,2.45781499187234,2.35770738534752,1.41872186913819,3.0322698992352,2.63278432963394,5.17590413494819,1.87737366450968,1.90648863777438,0.882113592219848,2.30840754118072,1.61464426695906,1.44751019827574,1.67121281604391,1.47726809770555,1.7488850197791,10.5692422145991,0.512612642393558,1.23832120777933,1.11116716421827,0.376736914009382,0.956859594047176,0.457556346413045,4.9293744698218,4.05859211738608,4.28419918793714,2.86401185404534,1.10717597753397,1.42323626988794,1.83609079397062,2.09088296014469,1.31017538247707,2.96701562046606,1.32245529160537,3.40282724579238,1.03691978633434,3.10669656543463,15.7834022831573,2.24274819065968,2.97825282822776,5.05573089694524,5.55387240954244,5.23763989021412,4.5769323071844,3.3853140059427,5.24296722128554,2.65742532908607,7.77681016896237,0.948033361884535,2.22997736819181,2.77319584345034,1.29920822977795,0.358053391334963,0.39736270956253,1.20195449519969,1.32920574457119,1.21159739937777,1.295515713135,0.604957110821043,0.682205165178267,0.288635524920988,0.584384510907845,2.72076460338254,1.55390167361845,1.70456327558004,1.00730769818447,1.9318959403219,1.50145980360946,3.6630324853453,1.2862102744744,1.00314420807073,8.471277639256,6.90487854760765,8.02053718815155,9.96748457593388,11.6464028361009,9.06472676867641,12.8254275044043,10.8077088773813,14.0474146785103,11.9084871702919,1.03787347584177,0.399024873401031,1.19513524027894,2.43106717068294,3.14419743941973,3.30918315210025,2.22246727801615,1.85431551515005,0.962757628775446,3.28506375292937,2.28131369901216,2.64076877940507,1.96647165686753,1.85672941974121,1.89537047553524,2.38146845641537,2.20180219295225,1.35036454324594,3.29668720642645,1.76638704161277,3.77156177623957,2.8396128985494,1.1921809497366,2.76158191601424,2.35273451038327,2.45382362885862,2.19513567447327,4.20911538300549,2.17286582153379,3.92799590160417,1.89816028998679,2.1670986122624,2.86461730218783,1.70430525304563,2.70069255373598,4.74640098082097,3.04111090979031,3.43793686477277,3.44318997723918,3.52946270591225,3.94175320554716 | ||
|short_description=p2@Sod1 | |short_description=p2@Sod1 | ||
}} | }} |
Revision as of 16:50, 14 November 2012
Short description: | p2@Sod1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sod1_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -16bp_to_ENSMUST00000023707, NM_011434, uc007zvz.1_5end |
EntrezGene: | Sod1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.43e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-10 | 23 |
electrically responsive cell | 5.95e-07 | 39 |
electrically active cell | 5.95e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.