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FFCP PHASE1:Mm9::chr4:15076158..15076192,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=69352|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=-50bp_to_ENSMUST00000141105_5end|description=CAGE_peak_1_at_Necab1_5end|id=chr4:15076158..15076192,-|ontology_enrichment_celltype=CL:0000117!5.76e-08!23;CL:0000337!5.76e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.50e-09,23;CL:0000337,1.50e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.41e-16!71;UBERON:0003075!6.41e-16!71;UBERON:0007284!6.41e-16!71;UBERON:0001049!1.67e-15!52;UBERON:0005068!1.67e-15!52;UBERON:0006241!1.67e-15!52;UBERON:0007135!1.67e-15!52;UBERON:0000955!1.13e-14!50;UBERON:0006238!1.13e-14!50;UBERON:0002616!4.74e-14!49;UBERON:0000033!1.38e-13!63;UBERON:0000073!1.43e-13!75;UBERON:0001016!1.43e-13!75;UBERON:0002020!1.78e-13!34;UBERON:0001017!2.81e-13!73;UBERON:0005743!2.81e-13!73;UBERON:0004121!5.82e-13!102;UBERON:0000924!5.82e-13!102;UBERON:0006601!5.82e-13!102;UBERON:0003056!9.27e-13!49;UBERON:0003080!6.57e-12!40;UBERON:0002780!2.46e-11!39;UBERON:0001890!2.46e-11!39;UBERON:0006240!2.46e-11!39;UBERON:0002791!7.18e-11!29;UBERON:0003528!7.18e-11!29;UBERON:0001893!7.18e-11!29;UBERON:0000025!2.41e-10!114;UBERON:0004111!1.61e-09!122;UBERON:0002021!1.70e-08!10;UBERON:0000411!1.70e-08!10;UBERON:0001950!1.70e-08!10;UBERON:0000956!7.48e-08!21;UBERON:0001869!7.48e-08!21;UBERON:0000203!7.48e-08!21;UBERON:0000468!3.07e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.68e-19,54;UBERON:0001049,1.26e-17,52;UBERON:0005068,1.26e-17,52;UBERON:0006241,1.26e-17,52;UBERON:0007135,1.26e-17,52;UBERON:0002346,3.33e-17,64;UBERON:0003075,3.33e-17,64;UBERON:0007284,3.33e-17,64;UBERON:0002020,2.89e-16,34;UBERON:0001017,9.47e-15,73;UBERON:0001016,9.49e-15,75;UBERON:0000955,1.34e-14,47;UBERON:0006238,1.34e-14,47;UBERON:0010371,3.12e-14,73;UBERON:0002616,6.91e-14,46;UBERON:0003056,2.18e-13,49;UBERON:0003528,4.14e-13,29;UBERON:0002791,4.14e-13,29;UBERON:0001893,4.14e-13,29;UBERON:0003080,8.01e-13,40;UBERON:0004121,8.64e-13,95;UBERON:0000924,8.64e-13,95;UBERON:0006601,8.64e-13,95;UBERON:0002780,3.75e-12,39;UBERON:0001890,3.75e-12,39;UBERON:0006240,3.75e-12,39;UBERON:0010314,3.83e-10,92;UBERON:0002021,6.36e-10,10;UBERON:0000411,6.36e-10,10;UBERON:0001950,6.36e-10,10;UBERON:0000956,1.83e-09,21;UBERON:0001869,1.83e-09,21;UBERON:0000203,1.83e-09,21;UBERON:0000025,4.10e-09,114;UBERON:0004111,3.37e-08,122;UBERON:0002619,5.19e-08,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22867966284093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,3.43937983461316,3.70293685490423,3.1691570175309,0,0,0,0,0,0,0,3.7328260431052,1.89008313664367,3.36519938162211,6.56997264128748,7.73039893330647,2.57230678351403,2.01275489138296,0,15.4162233399144,40.4768861730045,29.03163478543,3.29715719325485,3.20206752608434,1.56274011167028,5.58365998002762,15.1945904708554,18.1829914854404,19.7401152267357,24.915044139843,14.5391567743734,0.530083353332288,5.2144376473682,0.289864488701678,11.185510400758,4.75979933595425,26.9851595818909,27.2906095328021,16.1289679355041,7.16266542671934,0,0,0,0.281686839553361,0,0,0,0,0,0,5.02409070763864,0,4.60170631100957,1.04091196059682,0.304465478312141,0.922461989024234,1.05505848386836,1.17588707135705,1.75933227861546,0,0.289198713839823,0,2.42650274921114,1.32504911076236,0.969750506270444,0,12.0040126774734,7.95897485891129,1.27728527604296,0,0,0,29.2091746839404,48.0375632959558,14.3245961408665,67.0961875942187,64.4402952472433,45.0900056694245,43.3184172390913,0.81471491080253,0.124406970610093,1.0108910337347,5.05060454127538,0,0.229902104433473,0.900310649026746,1.65775299619287,3.19771546011241,5.63700369253339,4.68508622798644,17.5918292102531,0,0.945530400839096,3.34307135911503,1.97276159184817,2.22437799380478,2.43776516565517,1.85203922767149,0.59710280045548,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0.617068451549513,0.232533944750408,0.536546802799238,0.233530684734339,0.987359099480883,1.64167464079095,1.29710095273369,1.16959989940266,1.97595103761946,0.536825675041487,35.3287113587734,8.12946437796347,0,0,0,0,0.257734922644187,0.403367049246685,0.889512175379481,0.190225626112559,0.474529061544512,0.329397909448022,1.50801125280162,1.98956472041151,1.16978452271472,0,0.216138049874694,0.597423819763102,0,0.228497025219458,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,10.0793893209631,0.83422552858047,1.37591296579242,1.12431056192427,1.82574109249653,2.65294875727659,0.25462585178142,1.15078454980324,0.810676133875177,3.84385978463314,8.62609239164127,7.07067800570156,7.80094182786401,12.6289438973556,15.4281775628844,10.1313139486307,0,0.568474235311454,0.325929952884052,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0,0,0,0,0,17.3394637186815,13.5965556446956,0,0.757412781613119,0,0.390438744296638,2.15423397732799,0.238968797952552,0.668396022247182,0,1.61924280669958,0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|EntrezGene=69352
|HGNC=
|MCL_coexpression_id=2
|UniProt=
|association_with_transcript=-50bp_to_ENSMUST00000141105_5end
|description=CAGE_peak_1_at_Necab1_5end
|id=chr4:15076158..15076192,-
|ontology_enrichment_celltype=CL:0000117!5.76e-08!23;CL:0000337!5.76e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.50e-09,23;CL:0000337,1.50e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.41e-16!71;UBERON:0003075!6.41e-16!71;UBERON:0007284!6.41e-16!71;UBERON:0001049!1.67e-15!52;UBERON:0005068!1.67e-15!52;UBERON:0006241!1.67e-15!52;UBERON:0007135!1.67e-15!52;UBERON:0000955!1.13e-14!50;UBERON:0006238!1.13e-14!50;UBERON:0002616!4.74e-14!49;UBERON:0000033!1.38e-13!63;UBERON:0000073!1.43e-13!75;UBERON:0001016!1.43e-13!75;UBERON:0002020!1.78e-13!34;UBERON:0001017!2.81e-13!73;UBERON:0005743!2.81e-13!73;UBERON:0004121!5.82e-13!102;UBERON:0000924!5.82e-13!102;UBERON:0006601!5.82e-13!102;UBERON:0003056!9.27e-13!49;UBERON:0003080!6.57e-12!40;UBERON:0002780!2.46e-11!39;UBERON:0001890!2.46e-11!39;UBERON:0006240!2.46e-11!39;UBERON:0002791!7.18e-11!29;UBERON:0003528!7.18e-11!29;UBERON:0001893!7.18e-11!29;UBERON:0000025!2.41e-10!114;UBERON:0004111!1.61e-09!122;UBERON:0002021!1.70e-08!10;UBERON:0000411!1.70e-08!10;UBERON:0001950!1.70e-08!10;UBERON:0000956!7.48e-08!21;UBERON:0001869!7.48e-08!21;UBERON:0000203!7.48e-08!21;UBERON:0000468!3.07e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.68e-19,54;UBERON:0001049,1.26e-17,52;UBERON:0005068,1.26e-17,52;UBERON:0006241,1.26e-17,52;UBERON:0007135,1.26e-17,52;UBERON:0002346,3.33e-17,64;UBERON:0003075,3.33e-17,64;UBERON:0007284,3.33e-17,64;UBERON:0002020,2.89e-16,34;UBERON:0001017,9.47e-15,73;UBERON:0001016,9.49e-15,75;UBERON:0000955,1.34e-14,47;UBERON:0006238,1.34e-14,47;UBERON:0010371,3.12e-14,73;UBERON:0002616,6.91e-14,46;UBERON:0003056,2.18e-13,49;UBERON:0003528,4.14e-13,29;UBERON:0002791,4.14e-13,29;UBERON:0001893,4.14e-13,29;UBERON:0003080,8.01e-13,40;UBERON:0004121,8.64e-13,95;UBERON:0000924,8.64e-13,95;UBERON:0006601,8.64e-13,95;UBERON:0002780,3.75e-12,39;UBERON:0001890,3.75e-12,39;UBERON:0006240,3.75e-12,39;UBERON:0010314,3.83e-10,92;UBERON:0002021,6.36e-10,10;UBERON:0000411,6.36e-10,10;UBERON:0001950,6.36e-10,10;UBERON:0000956,1.83e-09,21;UBERON:0001869,1.83e-09,21;UBERON:0000203,1.83e-09,21;UBERON:0000025,4.10e-09,114;UBERON:0004111,3.37e-08,122;UBERON:0002619,5.19e-08,17
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.22867966284093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,3.43937983461316,3.70293685490423,3.1691570175309,0,0,0,0,0,0,0,3.7328260431052,1.89008313664367,3.36519938162211,6.56997264128748,7.73039893330647,2.57230678351403,2.01275489138296,0,15.4162233399144,40.4768861730045,29.03163478543,3.29715719325485,3.20206752608434,1.56274011167028,5.58365998002762,15.1945904708554,18.1829914854404,19.7401152267357,24.915044139843,14.5391567743734,0.530083353332288,5.2144376473682,0.289864488701678,11.185510400758,4.75979933595425,26.9851595818909,27.2906095328021,16.1289679355041,7.16266542671934,0,0,0,0.281686839553361,0,0,0,0,0,0,5.02409070763864,0,4.60170631100957,1.04091196059682,0.304465478312141,0.922461989024234,1.05505848386836,1.17588707135705,1.75933227861546,0,0.289198713839823,0,2.42650274921114,1.32504911076236,0.969750506270444,0,12.0040126774734,7.95897485891129,1.27728527604296,0,0,0,29.2091746839404,48.0375632959558,14.3245961408665,67.0961875942187,64.4402952472433,45.0900056694245,43.3184172390913,0.81471491080253,0.124406970610093,1.0108910337347,5.05060454127538,0,0.229902104433473,0.900310649026746,1.65775299619287,3.19771546011241,5.63700369253339,4.68508622798644,17.5918292102531,0,0.945530400839096,3.34307135911503,1.97276159184817,2.22437799380478,2.43776516565517,1.85203922767149,0.59710280045548,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0.617068451549513,0.232533944750408,0.536546802799238,0.233530684734339,0.987359099480883,1.64167464079095,1.29710095273369,1.16959989940266,1.97595103761946,0.536825675041487,35.3287113587734,8.12946437796347,0,0,0,0,0.257734922644187,0.403367049246685,0.889512175379481,0.190225626112559,0.474529061544512,0.329397909448022,1.50801125280162,1.98956472041151,1.16978452271472,0,0.216138049874694,0.597423819763102,0,0.228497025219458,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,10.0793893209631,0.83422552858047,1.37591296579242,1.12431056192427,1.82574109249653,2.65294875727659,0.25462585178142,1.15078454980324,0.810676133875177,3.84385978463314,8.62609239164127,7.07067800570156,7.80094182786401,12.6289438973556,15.4281775628844,10.1313139486307,0,0.568474235311454,0.325929952884052,0.339490171550376,0,0,0.238043640886014,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0,0,0,0,0,17.3394637186815,13.5965556446956,0,0.757412781613119,0,0.390438744296638,2.15423397732799,0.238968797952552,0.668396022247182,0,1.61924280669958,0.584511715822624,0.790575555893047,51.0900893110673,0.283880170416537,0.534196811001766,0.81443479676788,0.164970122972535,0,0.728341908464944,0.302323556964751,0.377210159511796,0.590603785761546,1.22974059177571,0.516856586336442,0,0.712994756769443,0.948110273807448,0,0,3.74483566329167,0.36012218806262,0.129358683782755,0.428674070063185,1.59606210278046,1.07021290561242,2.63278432963394,0.913394847343798,0.23467170806371,0,3.08739757276947,1.15420377059036,0.322928853391811,1.26657142349127,0.954978752025092,1.31312719796049,0.291480836629851,19.284231409093,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,4.77335309007557,0,0.609958401380546,0.756037385752609,0.627264888043406,0.436725127492355,2.15782954215713,1.81837602595739,1.57053565190418,0.388844919875379,0,0,0.598066184175915,0.66183396182839,0.583353565032143,1.6790777052105,4.05494701177868,2.22978753426933,2.47388331203505,2.83120229949419,1.20792060413003,0.288030006257865,0,0.202725215290164,0.308132871494482,0.129920822977795,0.358053391334963,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,5.9888774149979,0,0.36630324853453,0.643105137237198,0,108.432353782477,105.414479160144,85.9343270159095,84.3799125307506,80.8397373329358,75.53938973897,74.2524750254986,78.3558893610144,91.0816242058251,70.9331627099993,0.31136204275253,1.59609949360412,1.36586884603307,3.8897074730927,3.14419743941973,3.49302666055027,3.11145418922261,3.29656091582231,2.88827288632634,3.53776096469316,5.83002389747551,3.2066478035633,3.09016974650612,3.52138338226781,4.25022470271538,5.71552429539688,3.1288768005111,4.24400285020151,4.12085900803307,3.67997300335993,2.74295401908332,3.54951612318675,3.33810665926249,2.90692833264657,4.98779716201252,3.46919892355874,2.74391959309159,4.73525480588117,3.66671107383827,4.48913817326191,4.03359061622192,3.64466584789585,3.6830793885272,3.71848418846318,3.08650577569826,2.99772693525535,3.27504251823572,3.00819475667618,2.48674831689496,1.76473135295612,3.70988536992674
|short_description=p1@Necab1
}}

Revision as of 04:33, 14 September 2013

Short description:p1@Necab1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Necab1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -50bp_to_ENSMUST00000141105_5end
EntrezGene:Necab1
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Necab1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.48
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.03
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.74
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F95.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C826.99
Mouse hepatocyte, donor6.CNhs13090.11822-124F427.29
Mouse hepatocyte, donor8.CNhs13091.11824-124F616.13
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.02
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A429.21
corpus striatum, adult.CNhs10487.19-21D848.04
corpus striatum, neonate N00.CNhs11226.630-43F114.32
cortex, adult.CNhs10473.12-14D567.10
cortex, neonate N30.CNhs11107.1392-42F264.44
diencephalon, adult.CNhs10482.20-12F245.09
diencephalon, neonate N30.CNhs11201.1388-42B243.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C63.20
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G84.69
eyeball, neonate N16.CNhs11188.777-19A217.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E835.33
hippocampus, neonate N00.CNhs11228.627-43G18.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B210.08
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B97.80
liver, neonate N20.CNhs11220.823-25A312.63
liver, neonate N25.CNhs11198.1368-26H115.43
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C217.34
medulla oblongata, neonate N30.CNhs11200.1396-42A313.60
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I951.09
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C919.28
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1108.43
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2105.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A385.93
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D784.38
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A480.84
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A575.54
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A674.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A778.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A891.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A970.93
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.25
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.50e-0923
neuroblast (sensu Vertebrata)1.50e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.68e-1954
neural tube1.26e-1752
neural rod1.26e-1752
future spinal cord1.26e-1752
neural keel1.26e-1752
neurectoderm3.33e-1764
neural plate3.33e-1764
presumptive neural plate3.33e-1764
gray matter2.89e-1634
central nervous system9.47e-1573
nervous system9.49e-1575
brain1.34e-1447
future brain1.34e-1447
ecto-epithelium3.12e-1473
regional part of brain6.91e-1446
pre-chordal neural plate2.18e-1349
brain grey matter4.14e-1329
regional part of telencephalon4.14e-1329
telencephalon4.14e-1329
anterior neural tube8.01e-1340
ectoderm-derived structure8.64e-1395
ectoderm8.64e-1395
presumptive ectoderm8.64e-1395
regional part of forebrain3.75e-1239
forebrain3.75e-1239
future forebrain3.75e-1239
structure with developmental contribution from neural crest3.83e-1092
occipital lobe6.36e-1010
visual cortex6.36e-1010
neocortex6.36e-1010
cerebral cortex1.83e-0921
cerebral hemisphere1.83e-0921
pallium1.83e-0921
tube4.10e-09114
anatomical conduit3.37e-08122
regional part of cerebral cortex5.19e-0817







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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