FFCP PHASE1:Mm9::chr15:18748650..18748697,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=320873|HGNC=|MCL_coexpression_id=1|UniProt=P70408|association_with_transcript=-4bp_to_ENSMUST00000166873,uc007vii.1,uc007vij.1,uc007vik.1_5end|description=CAGE_peak_2_at_Cdh10_5end|id=chr15:18748650..18748697,+|ontology_enrichment_celltype=CL:0000540!2.11e-16!33;CL:0000047!2.11e-16!33;CL:0000031!2.11e-16!33;CL:0000404!2.11e-16!33;CL:0000393!5.16e-12!39;CL:0000211!5.16e-12!39;CL:0000221!6.54e-12!44;CL:0000133!6.54e-12!44;CL:0002319!1.24e-11!43;CL:0000117!2.77e-11!23;CL:0000337!2.77e-11!23;CL:0000055!2.64e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,3.20e-20,33;CL:0000047,3.20e-20,33;CL:0000031,3.20e-20,33;CL:0000404,3.20e-20,33;CL:0000393,3.75e-15,39;CL:0000211,3.75e-15,39;CL:0000117,8.78e-14,23;CL:0000337,8.78e-14,23;CL:0000221,5.83e-13,44;CL:0000133,5.83e-13,44;CL:0002319,1.28e-12,43;CL:0000107,1.36e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.65e-32!73;UBERON:0005743!1.65e-32!73;UBERON:0000073!3.17e-32!75;UBERON:0001016!3.17e-32!75;UBERON:0004121!9.13e-29!102;UBERON:0000924!9.13e-29!102;UBERON:0006601!9.13e-29!102;UBERON:0002346!3.96e-27!71;UBERON:0003075!3.96e-27!71;UBERON:0007284!3.96e-27!71;UBERON:0000033!8.75e-25!63;UBERON:0001049!1.32e-24!52;UBERON:0005068!1.32e-24!52;UBERON:0006241!1.32e-24!52;UBERON:0007135!1.32e-24!52;UBERON:0000955!1.55e-23!50;UBERON:0006238!1.55e-23!50;UBERON:0002616!8.86e-23!49;UBERON:0003056!1.79e-21!49;UBERON:0003080!1.11e-19!40;UBERON:0002780!5.77e-19!39;UBERON:0001890!5.77e-19!39;UBERON:0006240!5.77e-19!39;UBERON:0002020!5.45e-17!34;UBERON:0002791!3.90e-14!29;UBERON:0003528!3.90e-14!29;UBERON:0001893!3.90e-14!29;UBERON:0000153!9.22e-13!94;UBERON:0007811!1.19e-11!86;UBERON:0000956!2.93e-10!21;UBERON:0001869!2.93e-10!21;UBERON:0000203!2.93e-10!21;UBERON:0002021!6.80e-09!10;UBERON:0000411!6.80e-09!10;UBERON:0001950!6.80e-09!10;UBERON:0002619!1.74e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.13e-39,73;UBERON:0001016,6.72e-38,75;UBERON:0002346,8.05e-34,64;UBERON:0003075,8.05e-34,64;UBERON:0007284,8.05e-34,64;UBERON:0004121,1.08e-32,95;UBERON:0000924,1.08e-32,95;UBERON:0006601,1.08e-32,95;UBERON:0000073,3.09e-32,54;UBERON:0001049,1.32e-30,52;UBERON:0005068,1.32e-30,52;UBERON:0006241,1.32e-30,52;UBERON:0007135,1.32e-30,52;UBERON:0010371,9.40e-29,73;UBERON:0000955,8.66e-27,47;UBERON:0006238,8.66e-27,47;UBERON:0002616,7.47e-26,46;UBERON:0003056,1.68e-25,49;UBERON:0003080,6.23e-25,40;UBERON:0002780,5.02e-24,39;UBERON:0001890,5.02e-24,39;UBERON:0006240,5.02e-24,39;UBERON:0010314,8.05e-22,92;UBERON:0002020,1.53e-21,34;UBERON:0003528,6.25e-18,29;UBERON:0002791,6.25e-18,29;UBERON:0001893,6.25e-18,29;UBERON:0000956,4.82e-13,21;UBERON:0001869,4.82e-13,21;UBERON:0000203,4.82e-13,21;UBERON:0002619,8.22e-11,17;UBERON:0002021,8.84e-11,10;UBERON:0000411,8.84e-11,10;UBERON:0001950,8.84e-11,10;UBERON:0002410,1.36e-07,9;UBERON:0001894,5.67e-07,10;UBERON:0006222,5.67e-07,10|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0.515672092277442,3.84401275633236,3.1739458756322,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,4.56234294157302,1.62007125998029,6.09942387919008,6.28432165688368,4.8591079009355,5.75706756310284,1.82106394934649,1.83843757322004,7.70811166995721,8.42736431362239,12.595735727012,3.16527090552465,2.10421580285542,3.64639359389732,4.4669279840221,6.19038871034848,12.835052813252,9.72274332063103,14.0947963991112,4.84638559145781,0.151452386666368,0.831287161174641,0,0,0,0,0,0,0.421333260395256,0,0,0,2.25349471642689,0,0,0,1.5154372870785,1.26679932737549,1.51657333504435,0.22836775943812,0.517875767294343,0,2.25530924795977,0.913396434936424,1.38369298353635,0.60289056221049,0.352766121407114,0,0,0,0,0,0,0,0,4.9772735491963,2.72280718857492,0,0,0,0,14.2301107434582,11.4375150704657,6.53402630986895,20.1636211423041,25.8272611903634,15.1685272528479,15.5751612545047,0.509196819251581,0,0.252722758433675,0.420883711772948,2.99277018814219,2.98872735763515,2.52086981727489,2.26057226753573,1.7009124787832,2.0498195245576,1.40552586839593,0.776110112217047,0.431135985865684,1.13463648100692,1.93546236580344,0.876782929710299,2.22437799380478,0.348252166522167,1.23469281844766,0.796137067273973,0,0,0,1.65700618028402,0.703578179943289,0.540186184383045,1.42046841351126,0.196764231747404,1.07986979021165,0.697601834251224,0.268273401399619,0.233530684734339,0,0,0,0,0,0,14.0894265537965,12.7601719350313,0,0,2.13288250535234,1.62565670302307,0.902072229254653,0.201683524623343,0,0,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0.500535317148282,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.488894929326078,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.22146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| ||
|EntrezGene=320873 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P70408 | |||
|association_with_transcript=-4bp_to_ENSMUST00000166873,uc007vii.1,uc007vij.1,uc007vik.1_5end | |||
|description=CAGE_peak_2_at_Cdh10_5end | |||
|id=chr15:18748650..18748697,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.11e-16!33;CL:0000047!2.11e-16!33;CL:0000031!2.11e-16!33;CL:0000404!2.11e-16!33;CL:0000393!5.16e-12!39;CL:0000211!5.16e-12!39;CL:0000221!6.54e-12!44;CL:0000133!6.54e-12!44;CL:0002319!1.24e-11!43;CL:0000117!2.77e-11!23;CL:0000337!2.77e-11!23;CL:0000055!2.64e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.20e-20,33;CL:0000047,3.20e-20,33;CL:0000031,3.20e-20,33;CL:0000404,3.20e-20,33;CL:0000393,3.75e-15,39;CL:0000211,3.75e-15,39;CL:0000117,8.78e-14,23;CL:0000337,8.78e-14,23;CL:0000221,5.83e-13,44;CL:0000133,5.83e-13,44;CL:0002319,1.28e-12,43;CL:0000107,1.36e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.65e-32!73;UBERON:0005743!1.65e-32!73;UBERON:0000073!3.17e-32!75;UBERON:0001016!3.17e-32!75;UBERON:0004121!9.13e-29!102;UBERON:0000924!9.13e-29!102;UBERON:0006601!9.13e-29!102;UBERON:0002346!3.96e-27!71;UBERON:0003075!3.96e-27!71;UBERON:0007284!3.96e-27!71;UBERON:0000033!8.75e-25!63;UBERON:0001049!1.32e-24!52;UBERON:0005068!1.32e-24!52;UBERON:0006241!1.32e-24!52;UBERON:0007135!1.32e-24!52;UBERON:0000955!1.55e-23!50;UBERON:0006238!1.55e-23!50;UBERON:0002616!8.86e-23!49;UBERON:0003056!1.79e-21!49;UBERON:0003080!1.11e-19!40;UBERON:0002780!5.77e-19!39;UBERON:0001890!5.77e-19!39;UBERON:0006240!5.77e-19!39;UBERON:0002020!5.45e-17!34;UBERON:0002791!3.90e-14!29;UBERON:0003528!3.90e-14!29;UBERON:0001893!3.90e-14!29;UBERON:0000153!9.22e-13!94;UBERON:0007811!1.19e-11!86;UBERON:0000956!2.93e-10!21;UBERON:0001869!2.93e-10!21;UBERON:0000203!2.93e-10!21;UBERON:0002021!6.80e-09!10;UBERON:0000411!6.80e-09!10;UBERON:0001950!6.80e-09!10;UBERON:0002619!1.74e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.13e-39,73;UBERON:0001016,6.72e-38,75;UBERON:0002346,8.05e-34,64;UBERON:0003075,8.05e-34,64;UBERON:0007284,8.05e-34,64;UBERON:0004121,1.08e-32,95;UBERON:0000924,1.08e-32,95;UBERON:0006601,1.08e-32,95;UBERON:0000073,3.09e-32,54;UBERON:0001049,1.32e-30,52;UBERON:0005068,1.32e-30,52;UBERON:0006241,1.32e-30,52;UBERON:0007135,1.32e-30,52;UBERON:0010371,9.40e-29,73;UBERON:0000955,8.66e-27,47;UBERON:0006238,8.66e-27,47;UBERON:0002616,7.47e-26,46;UBERON:0003056,1.68e-25,49;UBERON:0003080,6.23e-25,40;UBERON:0002780,5.02e-24,39;UBERON:0001890,5.02e-24,39;UBERON:0006240,5.02e-24,39;UBERON:0010314,8.05e-22,92;UBERON:0002020,1.53e-21,34;UBERON:0003528,6.25e-18,29;UBERON:0002791,6.25e-18,29;UBERON:0001893,6.25e-18,29;UBERON:0000956,4.82e-13,21;UBERON:0001869,4.82e-13,21;UBERON:0000203,4.82e-13,21;UBERON:0002619,8.22e-11,17;UBERON:0002021,8.84e-11,10;UBERON:0000411,8.84e-11,10;UBERON:0001950,8.84e-11,10;UBERON:0002410,1.36e-07,9;UBERON:0001894,5.67e-07,10;UBERON:0006222,5.67e-07,10 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0.515672092277442,3.84401275633236,3.1739458756322,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,4.56234294157302,1.62007125998029,6.09942387919008,6.28432165688368,4.8591079009355,5.75706756310284,1.82106394934649,1.83843757322004,7.70811166995721,8.42736431362239,12.595735727012,3.16527090552465,2.10421580285542,3.64639359389732,4.4669279840221,6.19038871034848,12.835052813252,9.72274332063103,14.0947963991112,4.84638559145781,0.151452386666368,0.831287161174641,0,0,0,0,0,0,0.421333260395256,0,0,0,2.25349471642689,0,0,0,1.5154372870785,1.26679932737549,1.51657333504435,0.22836775943812,0.517875767294343,0,2.25530924795977,0.913396434936424,1.38369298353635,0.60289056221049,0.352766121407114,0,0,0,0,0,0,0,0,4.9772735491963,2.72280718857492,0,0,0,0,14.2301107434582,11.4375150704657,6.53402630986895,20.1636211423041,25.8272611903634,15.1685272528479,15.5751612545047,0.509196819251581,0,0.252722758433675,0.420883711772948,2.99277018814219,2.98872735763515,2.52086981727489,2.26057226753573,1.7009124787832,2.0498195245576,1.40552586839593,0.776110112217047,0.431135985865684,1.13463648100692,1.93546236580344,0.876782929710299,2.22437799380478,0.348252166522167,1.23469281844766,0.796137067273973,0,0,0,1.65700618028402,0.703578179943289,0.540186184383045,1.42046841351126,0.196764231747404,1.07986979021165,0.697601834251224,0.268273401399619,0.233530684734339,0,0,0,0,0,0,14.0894265537965,12.7601719350313,0,0,2.13288250535234,1.62565670302307,0.902072229254653,0.201683524623343,0,0,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0.500535317148282,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13694847062291,0.488894929326078,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0.275936746304732,14.1284519189257,11.7211686592203,0,0,8.20321370482267,3.51394869866975,9.47862950024315,10.9925647058174,11.1399337041197,10.4738316391868,6.8817819284732,5.84511715822624,6.7198922250909,16.3873871375122,0,1.24645922567079,1.46598263418218,0.329940245945071,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,2.38307724027652,5.94201610303324,2.97524972700335,6.64444808597936,7.80297028026004,3.21063871683727,3.29098041204242,1.8267896946876,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0,12.6089205367147,0,0.82554747185289,0,0.188368457004691,0,0.228778173206523,0,0,0,0,2.05618395827738,1.42323626988794,0.540026704109006,0.627264888043406,0.218362563746178,0.269728692769641,0.330613822901344,0,0,0,0,0,0.496375471371293,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0.608175645870493,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,22.0253218620656,24.8575627713876,26.3531936182122,19.4194096048367,21.2375581128899,27.9495742034189,25.6508550088086,21.1650965515384,18.5788387683524,21.7459330935764,0.830298780673413,3.59122386060928,2.04880326904961,1.21553358534147,1.04806581313991,1.2869045591501,2.22246727801615,3.29656091582231,2.24643446714271,3.03236654116557,1.77435509923168,2.45214243801899,2.71560371662659,3.07320731543373,2.46972516509137,1.42888107384922,2.54945517078682,2.31491064556446,2.06042950401653,3.53277408322554,1.37147700954166,2.48466128623072,2.86123427936785,2.76158191601424,2.63506265162926,2.96151127620868,2.37806364734604,2.89376682581627,2.98769050460896,2.80571135828869,1.89816028998679,2.65962102414021,0.409231043169689,1.54936841185966,2.89359916471712,3.49734809113124,2.57324769289949,1.71896843238639,1.53030665655075,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Cdh10 | |||
}} |
Revision as of 10:14, 13 September 2013
Short description: | p2@Cdh10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdh10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -4bp_to_ENSMUST00000166873, uc007vii.1, uc007vij.1, uc007vik.1_5end |
EntrezGene: | Cdh10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.20e-20 | 33 |
neuronal stem cell | 3.20e-20 | 33 |
neuroblast | 3.20e-20 | 33 |
electrically signaling cell | 3.20e-20 | 33 |
electrically responsive cell | 3.75e-15 | 39 |
electrically active cell | 3.75e-15 | 39 |
CNS neuron (sensu Vertebrata) | 8.78e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.78e-14 | 23 |
ectodermal cell | 5.83e-13 | 44 |
neurectodermal cell | 5.83e-13 | 44 |
neural cell | 1.28e-12 | 43 |
autonomic neuron | 1.36e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.