FFCP PHASE1:Mm9::chr11:121282702..121282783,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=238024|HGNC=|MCL_coexpression_id=15|UniProt=Q8K274|association_with_transcript=0bp_to_ENSMUST00000038096_5end|description=CAGE_peak_1_at_Fn3krp_5end|id=chr11:121282702..121282783,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.90e-16!63;UBERON:0000955!1.21e-13!50;UBERON:0006238!1.21e-13!50;UBERON:0002616!3.38e-13!49;UBERON:0003056!4.24e-13!49;UBERON:0002346!9.94e-13!71;UBERON:0003075!9.94e-13!71;UBERON:0007284!9.94e-13!71;UBERON:0001049!2.11e-12!52;UBERON:0005068!2.11e-12!52;UBERON:0006241!2.11e-12!52;UBERON:0007135!2.11e-12!52;UBERON:0000475!6.10e-12!200;UBERON:0000025!8.71e-11!114;UBERON:0001017!4.87e-10!73;UBERON:0005743!4.87e-10!73;UBERON:0004111!5.70e-10!122;UBERON:0003080!1.65e-09!40;UBERON:0004121!2.06e-09!102;UBERON:0000924!2.06e-09!102;UBERON:0006601!2.06e-09!102;UBERON:0000073!2.46e-09!75;UBERON:0001016!2.46e-09!75;UBERON:0002780!4.80e-09!39;UBERON:0001890!4.80e-09!39;UBERON:0006240!4.80e-09!39;UBERON:0000468!5.46e-09!333;UBERON:0007811!5.62e-09!86;UBERON:0000153!1.75e-08!94;UBERON:0002791!2.12e-08!29;UBERON:0003528!2.12e-08!29;UBERON:0001893!2.12e-08!29;UBERON:0002020!2.38e-08!34;UBERON:0000956!2.97e-07!21;UBERON:0001869!2.97e-07!21;UBERON:0000203!2.97e-07!21;UBERON:0000477!4.02e-07!154;UBERON:0002619!7.73e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.99e-14,64;UBERON:0003075,2.99e-14,64;UBERON:0007284,2.99e-14,64;UBERON:0000073,3.22e-13,54;UBERON:0003056,4.24e-13,49;UBERON:0001049,2.11e-12,52;UBERON:0005068,2.11e-12,52;UBERON:0006241,2.11e-12,52;UBERON:0007135,2.11e-12,52;UBERON:0000955,2.75e-12,47;UBERON:0006238,2.75e-12,47;UBERON:0002616,7.47e-12,46;UBERON:0010371,9.69e-12,73;UBERON:0000025,8.71e-11,114;UBERON:0004121,3.35e-10,95;UBERON:0000924,3.35e-10,95;UBERON:0006601,3.35e-10,95;UBERON:0001017,4.87e-10,73;UBERON:0004111,5.70e-10,122;UBERON:0003080,1.65e-09,40;UBERON:0001016,2.46e-09,75;UBERON:0002780,4.80e-09,39;UBERON:0001890,4.80e-09,39;UBERON:0006240,4.80e-09,39;UBERON:0003528,2.12e-08,29;UBERON:0002791,2.12e-08,29;UBERON:0001893,2.12e-08,29;UBERON:0002020,2.38e-08,34;UBERON:0010314,2.01e-07,92;UBERON:0000956,2.97e-07,21;UBERON:0001869,2.97e-07,21;UBERON:0000203,2.97e-07,21;UBERON:0002619,7.73e-07,17|phase1_expression=16.335182404689,1.39590163055744,0.454999239389536,3.93203474698879,3.00537437967808,3.86122325397347,4.90586545250604,6.58528949552039,0.563154888606667,0.234064526321993,3.93801326918661,5.74359544766422,6.16322627752341,8.21751782738576,80.2794525975747,131.811399070777,200.07469714465,6.30924330716475,7.40417941470989,11.0341309467488,24.7475974339613,9.4326403640841,6.00759515019551,3.99981056983517,3.44113921600755,1.14846392823004,1.7230479846363,3.23206849028834,5.89072600314759,5.29263272495855,3.32595765982957,9.52546010189447,6.1506478758457,0,8.08784535303569,11.137721239019,7.55426618170766,5.02237956884289,2.3440060335714,5.23523743973798,1.17646297606203,0.683045484958446,2.91306211818692,21.6542526917993,24.9387250800006,20.9243297464317,28.9484797408774,19.4042389178597,23.286735369854,25.6647466778054,18.8981669194239,25.8754615856949,5.20126078778983,6.5282592781021,4.03312558970957,9.00408026125814,14.3266719969378,13.4074743992135,18.613114399083,25.9205579843296,15.8457850876545,12.5372476865579,11.5608323494448,7.64914759689189,5.93319817540185,13.4991221839759,19.4740071836963,35.348084089583,19.2862678893768,19.1708432431001,17.6672967535161,19.9955689082663,19.2155630627904,16.4137670948038,18.9774032616108,25.7381260250806,31.9336054898227,38.4338887636415,37.0191745147547,21.4974649000216,22.1400097517831,19.7947080811569,35.7354238721768,20.8222165711722,26.4340968653881,16.4992007865254,14.8066548031067,20.8767379324337,8.5570598466498,12.69602209794,16.8121403446973,21.5105969245347,3.39985666853875,23.746940432064,14.2950811838487,21.5052905806721,22.611551641212,16.1908806449155,12.9893002301434,9.89350808628953,12.5350643601246,16.6824420638613,25.4805239706646,28.4426681261332,4.5463118612355,4.05375784760158,4.54972000513305,16.4424786795446,10.3575153458869,18.2583831049734,13.1848848342263,15.8322048722313,12.4532368518272,12.5099791658677,10.5829836422134,17.8446559688139,9.39340877390621,34.2700475900191,84.0380024352381,22.8091258425847,51.0143907643509,74.185913729689,14.9113408974498,46.2593659278244,33.3020263833394,6.64188343542338,5.51149572727233,4.19931911695385,4.95573885584952,39.9941007210877,34.312545211397,11.5602003943835,49.3661069346065,49.3530832647538,46.9600980704606,34.2329065072969,10.8968119319838,42.4227769780417,12.3834151632501,41.0361618978624,24.7228841629137,24.3696230699481,29.3501271582719,31.7987165633359,31.6369721053675,37.7935474840307,32.7956035959051,43.4621662841546,17.6765754204931,19.2888201771176,19.1786725338704,16.8780713969233,15.0145514581823,13.9300866608867,11.3180175024369,14.52950147775,6.31991868581911,6.69104558498259,5.9674334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| ||
|EntrezGene=238024 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=Q8K274 | |||
|association_with_transcript=0bp_to_ENSMUST00000038096_5end | |||
|description=CAGE_peak_1_at_Fn3krp_5end | |||
|id=chr11:121282702..121282783,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.90e-16!63;UBERON:0000955!1.21e-13!50;UBERON:0006238!1.21e-13!50;UBERON:0002616!3.38e-13!49;UBERON:0003056!4.24e-13!49;UBERON:0002346!9.94e-13!71;UBERON:0003075!9.94e-13!71;UBERON:0007284!9.94e-13!71;UBERON:0001049!2.11e-12!52;UBERON:0005068!2.11e-12!52;UBERON:0006241!2.11e-12!52;UBERON:0007135!2.11e-12!52;UBERON:0000475!6.10e-12!200;UBERON:0000025!8.71e-11!114;UBERON:0001017!4.87e-10!73;UBERON:0005743!4.87e-10!73;UBERON:0004111!5.70e-10!122;UBERON:0003080!1.65e-09!40;UBERON:0004121!2.06e-09!102;UBERON:0000924!2.06e-09!102;UBERON:0006601!2.06e-09!102;UBERON:0000073!2.46e-09!75;UBERON:0001016!2.46e-09!75;UBERON:0002780!4.80e-09!39;UBERON:0001890!4.80e-09!39;UBERON:0006240!4.80e-09!39;UBERON:0000468!5.46e-09!333;UBERON:0007811!5.62e-09!86;UBERON:0000153!1.75e-08!94;UBERON:0002791!2.12e-08!29;UBERON:0003528!2.12e-08!29;UBERON:0001893!2.12e-08!29;UBERON:0002020!2.38e-08!34;UBERON:0000956!2.97e-07!21;UBERON:0001869!2.97e-07!21;UBERON:0000203!2.97e-07!21;UBERON:0000477!4.02e-07!154;UBERON:0002619!7.73e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.99e-14,64;UBERON:0003075,2.99e-14,64;UBERON:0007284,2.99e-14,64;UBERON:0000073,3.22e-13,54;UBERON:0003056,4.24e-13,49;UBERON:0001049,2.11e-12,52;UBERON:0005068,2.11e-12,52;UBERON:0006241,2.11e-12,52;UBERON:0007135,2.11e-12,52;UBERON:0000955,2.75e-12,47;UBERON:0006238,2.75e-12,47;UBERON:0002616,7.47e-12,46;UBERON:0010371,9.69e-12,73;UBERON:0000025,8.71e-11,114;UBERON:0004121,3.35e-10,95;UBERON:0000924,3.35e-10,95;UBERON:0006601,3.35e-10,95;UBERON:0001017,4.87e-10,73;UBERON:0004111,5.70e-10,122;UBERON:0003080,1.65e-09,40;UBERON:0001016,2.46e-09,75;UBERON:0002780,4.80e-09,39;UBERON:0001890,4.80e-09,39;UBERON:0006240,4.80e-09,39;UBERON:0003528,2.12e-08,29;UBERON:0002791,2.12e-08,29;UBERON:0001893,2.12e-08,29;UBERON:0002020,2.38e-08,34;UBERON:0010314,2.01e-07,92;UBERON:0000956,2.97e-07,21;UBERON:0001869,2.97e-07,21;UBERON:0000203,2.97e-07,21;UBERON:0002619,7.73e-07,17 | |||
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| |||
|short_description=p1@Fn3krp | |||
}} |
Revision as of 19:10, 12 September 2013
Short description: | p1@Fn3krp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fn3krp_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000038096_5end |
EntrezGene: | Fn3krp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.99e-14 | 64 |
neural plate | 2.99e-14 | 64 |
presumptive neural plate | 2.99e-14 | 64 |
regional part of nervous system | 3.22e-13 | 54 |
pre-chordal neural plate | 4.24e-13 | 49 |
neural tube | 2.11e-12 | 52 |
neural rod | 2.11e-12 | 52 |
future spinal cord | 2.11e-12 | 52 |
neural keel | 2.11e-12 | 52 |
brain | 2.75e-12 | 47 |
future brain | 2.75e-12 | 47 |
regional part of brain | 7.47e-12 | 46 |
ecto-epithelium | 9.69e-12 | 73 |
tube | 8.71e-11 | 114 |
ectoderm-derived structure | 3.35e-10 | 95 |
ectoderm | 3.35e-10 | 95 |
presumptive ectoderm | 3.35e-10 | 95 |
central nervous system | 4.87e-10 | 73 |
anatomical conduit | 5.70e-10 | 122 |
anterior neural tube | 1.65e-09 | 40 |
nervous system | 2.46e-09 | 75 |
regional part of forebrain | 4.80e-09 | 39 |
forebrain | 4.80e-09 | 39 |
future forebrain | 4.80e-09 | 39 |
brain grey matter | 2.12e-08 | 29 |
regional part of telencephalon | 2.12e-08 | 29 |
telencephalon | 2.12e-08 | 29 |
gray matter | 2.38e-08 | 34 |
structure with developmental contribution from neural crest | 2.01e-07 | 92 |
cerebral cortex | 2.97e-07 | 21 |
cerebral hemisphere | 2.97e-07 | 21 |
pallium | 2.97e-07 | 21 |
regional part of cerebral cortex | 7.73e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.