FFCP PHASE1:Mm9::chr3:90345180..90345198,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67860|HGNC=|MCL_coexpression_id=664|UniProt=Q9D708|association_with_transcript=35bp_to_NM_026416,uc008qcx.1_5end|description=CAGE_peak_9_at_S100a16_5end|id=chr3:90345180..90345198,+|ontology_enrichment_celltype=CL:0000221!2.30e-12!44;CL:0000133!2.30e-12!44;CL:0002319!9.07e-12!43;CL:0000540!1.41e-09!33;CL:0000047!1.41e-09!33;CL:0000031!1.41e-09!33;CL:0000404!1.41e-09!33;CL:0000055!6.11e-09!50;CL:0000393!2.49e-07!39;CL:0000211!2.49e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,4.20e-14,33;CL:0000047,4.20e-14,33;CL:0000031,4.20e-14,33;CL:0000404,4.20e-14,33;CL:0000221,1.38e-13,44;CL:0000133,1.38e-13,44;CL:0002319,1.76e-12,43;CL:0000393,2.23e-12,39;CL:0000211,2.23e-12,39;CL:0000107,4.84e-10,9;CL:0002321,5.97e-08,70;CL:0000117,2.78e-07,23;CL:0000337,2.78e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.09e-26!75;UBERON:0001016!7.09e-26!75;UBERON:0001017!1.01e-24!73;UBERON:0005743!1.01e-24!73;UBERON:0004121!1.16e-21!102;UBERON:0000924!1.16e-21!102;UBERON:0006601!1.16e-21!102;UBERON:0002346!3.49e-17!71;UBERON:0003075!3.49e-17!71;UBERON:0007284!3.49e-17!71;UBERON:0001049!2.21e-16!52;UBERON:0005068!2.21e-16!52;UBERON:0006241!2.21e-16!52;UBERON:0007135!2.21e-16!52;UBERON:0000955!1.06e-15!50;UBERON:0006238!1.06e-15!50;UBERON:0002616!3.12e-15!49;UBERON:0000033!5.48e-14!63;UBERON:0002020!6.64e-11!34;UBERON:0003080!3.16e-10!40;UBERON:0000025!6.56e-10!114;UBERON:0002780!9.25e-10!39;UBERON:0001890!9.25e-10!39;UBERON:0006240!9.25e-10!39;UBERON:0004111!1.84e-09!122;UBERON:0003056!9.33e-09!49;UBERON:0002791!1.11e-08!29;UBERON:0003528!1.11e-08!29;UBERON:0001893!1.11e-08!29;UBERON:0003076!1.43e-07!12;UBERON:0003057!1.43e-07!12;UBERON:0000468!1.56e-07!333;UBERON:0002021!2.12e-07!10;UBERON:0000411!2.12e-07!10;UBERON:0001950!2.12e-07!10;UBERON:0002619!4.38e-07!17;UBERON:0000010!7.78e-07!11;UBERON:0000956!8.76e-07!21;UBERON:0001869!8.76e-07!21;UBERON:0000203!8.76e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.77e-34,75;UBERON:0001017,3.57e-33,73;UBERON:0004121,4.97e-26,95;UBERON:0000924,4.97e-26,95;UBERON:0006601,4.97e-26,95;UBERON:0000073,2.28e-24,54;UBERON:0001049,1.06e-21,52;UBERON:0005068,1.06e-21,52;UBERON:0006241,1.06e-21,52;UBERON:0007135,1.06e-21,52;UBERON:0002346,9.01e-19,64;UBERON:0003075,9.01e-19,64;UBERON:0007284,9.01e-19,64;UBERON:0002020,1.84e-17,34;UBERON:0000955,4.99e-17,47;UBERON:0006238,4.99e-17,47;UBERON:0010371,8.35e-17,73;UBERON:0002616,4.11e-16,46;UBERON:0002021,4.69e-16,10;UBERON:0000411,4.69e-16,10;UBERON:0001950,4.69e-16,10;UBERON:0010314,2.15e-13,92;UBERON:0003528,3.61e-13,29;UBERON:0002791,3.61e-13,29;UBERON:0001893,3.61e-13,29;UBERON:0003080,2.18e-12,40;UBERON:0002780,1.80e-11,39;UBERON:0001890,1.80e-11,39;UBERON:0006240,1.80e-11,39;UBERON:0003076,3.30e-11,12;UBERON:0003057,3.30e-11,12;UBERON:0011216,3.55e-11,194;UBERON:0000025,1.34e-10,114;UBERON:0004111,3.38e-10,122;UBERON:0000010,3.53e-10,11;UBERON:0002619,3.59e-10,17;UBERON:0002410,4.84e-10,9;UBERON:0000956,3.32e-09,21;UBERON:0001869,3.32e-09,21;UBERON:0000203,3.32e-09,21;UBERON:0003056,3.78e-09,49;UBERON:0002950,1.20e-07,4;UBERON:0001891,1.20e-07,4;UBERON:0009616,1.20e-07,4;UBERON:0010286,1.20e-07,4;UBERON:0002240,1.42e-07,6;UBERON:0005174,1.42e-07,6;UBERON:0001137,1.42e-07,6|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0.439372365468944,0.388859798148567,0.55994568650145,0,0,0,0,1.02903774414379,0.286533439938757,0,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0.898800331555214,9.22123932771731,0.207379224616955,0.270011876663381,0.210324961351382,6.28432165688368,7.95126747425809,0.734944795289724,0.575072826109418,0,4.40463523997555,6.76742891851495,3.5329502648936,0,0.182975287204819,1.04182674111352,8.09630697104005,4.50210088025344,3.36156145108982,2.35702868378934,1.99320353118744,0.372798891650601,0.984440513331393,2.64500460373749,1.73918693221007,0,0,0,0,0,0.421333260395256,0,0,0,3.66192891419369,0,0,0,0.432982082022428,0.253359865475099,0,0.22836775943812,0,0.445326417194474,1.38788261412909,0.608930956624282,0.461230994512117,0.60289056221049,0.352766121407114,0.376999773989026,0,0.289198713839823,0,0.485300549842228,0,0.484875253135222,0,2.63502717310392,3.56059401582874,0.255457055208591,0,0,0,1.79748767285787,2.74500361691176,0.753926112677186,1.73824320192276,1.79000820131231,6.02585329222724,3.56930778749067,0.509196819251581,0.248813941220186,0,0,0.130120442962704,0,0.360124259610698,0.30140963567143,0.204109497453984,0.2562274405697,0.374806898238915,0.776110112217047,0,0,0.175951124163949,0.43839146485515,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.462801338662135,0.697601834251224,0.804820204198858,0.583826711835847,0.16455984991348,0.656669856316381,0.405344047729279,0,0.439100230582101,0.536825675041487,1.68231958851302,0.514523061896422,0,0,0.213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| ||
|EntrezGene=67860 | |||
|HGNC= | |||
|MCL_coexpression_id=664 | |||
|UniProt=Q9D708 | |||
|association_with_transcript=35bp_to_NM_026416,uc008qcx.1_5end | |||
|description=CAGE_peak_9_at_S100a16_5end | |||
|id=chr3:90345180..90345198,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.30e-12!44;CL:0000133!2.30e-12!44;CL:0002319!9.07e-12!43;CL:0000540!1.41e-09!33;CL:0000047!1.41e-09!33;CL:0000031!1.41e-09!33;CL:0000404!1.41e-09!33;CL:0000055!6.11e-09!50;CL:0000393!2.49e-07!39;CL:0000211!2.49e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.20e-14,33;CL:0000047,4.20e-14,33;CL:0000031,4.20e-14,33;CL:0000404,4.20e-14,33;CL:0000221,1.38e-13,44;CL:0000133,1.38e-13,44;CL:0002319,1.76e-12,43;CL:0000393,2.23e-12,39;CL:0000211,2.23e-12,39;CL:0000107,4.84e-10,9;CL:0002321,5.97e-08,70;CL:0000117,2.78e-07,23;CL:0000337,2.78e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.09e-26!75;UBERON:0001016!7.09e-26!75;UBERON:0001017!1.01e-24!73;UBERON:0005743!1.01e-24!73;UBERON:0004121!1.16e-21!102;UBERON:0000924!1.16e-21!102;UBERON:0006601!1.16e-21!102;UBERON:0002346!3.49e-17!71;UBERON:0003075!3.49e-17!71;UBERON:0007284!3.49e-17!71;UBERON:0001049!2.21e-16!52;UBERON:0005068!2.21e-16!52;UBERON:0006241!2.21e-16!52;UBERON:0007135!2.21e-16!52;UBERON:0000955!1.06e-15!50;UBERON:0006238!1.06e-15!50;UBERON:0002616!3.12e-15!49;UBERON:0000033!5.48e-14!63;UBERON:0002020!6.64e-11!34;UBERON:0003080!3.16e-10!40;UBERON:0000025!6.56e-10!114;UBERON:0002780!9.25e-10!39;UBERON:0001890!9.25e-10!39;UBERON:0006240!9.25e-10!39;UBERON:0004111!1.84e-09!122;UBERON:0003056!9.33e-09!49;UBERON:0002791!1.11e-08!29;UBERON:0003528!1.11e-08!29;UBERON:0001893!1.11e-08!29;UBERON:0003076!1.43e-07!12;UBERON:0003057!1.43e-07!12;UBERON:0000468!1.56e-07!333;UBERON:0002021!2.12e-07!10;UBERON:0000411!2.12e-07!10;UBERON:0001950!2.12e-07!10;UBERON:0002619!4.38e-07!17;UBERON:0000010!7.78e-07!11;UBERON:0000956!8.76e-07!21;UBERON:0001869!8.76e-07!21;UBERON:0000203!8.76e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.77e-34,75;UBERON:0001017,3.57e-33,73;UBERON:0004121,4.97e-26,95;UBERON:0000924,4.97e-26,95;UBERON:0006601,4.97e-26,95;UBERON:0000073,2.28e-24,54;UBERON:0001049,1.06e-21,52;UBERON:0005068,1.06e-21,52;UBERON:0006241,1.06e-21,52;UBERON:0007135,1.06e-21,52;UBERON:0002346,9.01e-19,64;UBERON:0003075,9.01e-19,64;UBERON:0007284,9.01e-19,64;UBERON:0002020,1.84e-17,34;UBERON:0000955,4.99e-17,47;UBERON:0006238,4.99e-17,47;UBERON:0010371,8.35e-17,73;UBERON:0002616,4.11e-16,46;UBERON:0002021,4.69e-16,10;UBERON:0000411,4.69e-16,10;UBERON:0001950,4.69e-16,10;UBERON:0010314,2.15e-13,92;UBERON:0003528,3.61e-13,29;UBERON:0002791,3.61e-13,29;UBERON:0001893,3.61e-13,29;UBERON:0003080,2.18e-12,40;UBERON:0002780,1.80e-11,39;UBERON:0001890,1.80e-11,39;UBERON:0006240,1.80e-11,39;UBERON:0003076,3.30e-11,12;UBERON:0003057,3.30e-11,12;UBERON:0011216,3.55e-11,194;UBERON:0000025,1.34e-10,114;UBERON:0004111,3.38e-10,122;UBERON:0000010,3.53e-10,11;UBERON:0002619,3.59e-10,17;UBERON:0002410,4.84e-10,9;UBERON:0000956,3.32e-09,21;UBERON:0001869,3.32e-09,21;UBERON:0000203,3.32e-09,21;UBERON:0003056,3.78e-09,49;UBERON:0002950,1.20e-07,4;UBERON:0001891,1.20e-07,4;UBERON:0009616,1.20e-07,4;UBERON:0010286,1.20e-07,4;UBERON:0002240,1.42e-07,6;UBERON:0005174,1.42e-07,6;UBERON:0001137,1.42e-07,6 | |||
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|short_description=p9@S100a16 | |||
}} |
Revision as of 02:55, 14 September 2013
Short description: | p9@S100a16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_S100a16_5end |
Coexpression cluster: | MCL_coexpression_mm9:664 |
Association with transcript: | 35bp_to_NM_026416, uc008qcx.1_5end |
EntrezGene: | S100a16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.20e-14 | 33 |
neuronal stem cell | 4.20e-14 | 33 |
neuroblast | 4.20e-14 | 33 |
electrically signaling cell | 4.20e-14 | 33 |
ectodermal cell | 1.38e-13 | 44 |
neurectodermal cell | 1.38e-13 | 44 |
neural cell | 1.76e-12 | 43 |
electrically responsive cell | 2.23e-12 | 39 |
electrically active cell | 2.23e-12 | 39 |
autonomic neuron | 4.84e-10 | 9 |
embryonic cell | 5.97e-08 | 70 |
CNS neuron (sensu Vertebrata) | 2.78e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.78e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.