FFCP PHASE1:Mm9::chr15:71558315..71558339,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70363|HGNC=|MCL_coexpression_id=60|UniProt=Q9DAI6,Q8BLS3|association_with_transcript=-47bp_to_ENSMUST00000022953,NM_177819,uc007wbi.1,uc011ztr.1_5end|description=CAGE_peak_3_at_Fam135b_5end|id=chr15:71558315..71558339,-|ontology_enrichment_celltype=CL:0000117!1.27e-16!23;CL:0000337!1.27e-16!23;CL:0000540!5.22e-14!33;CL:0000047!5.22e-14!33;CL:0000031!5.22e-14!33;CL:0000404!5.22e-14!33;CL:0000393!1.14e-10!39;CL:0000211!1.14e-10!39;CL:0002319!9.47e-10!43;CL:0000221!2.33e-09!44;CL:0000133!2.33e-09!44;CL:0000055!2.27e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.07e-10,23;CL:0000337,8.07e-10,23;CL:0002612,1.01e-07,3;CL:0002614,4.54e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.00e-29!52;UBERON:0005068!2.00e-29!52;UBERON:0006241!2.00e-29!52;UBERON:0007135!2.00e-29!52;UBERON:0001017!2.17e-29!73;UBERON:0005743!2.17e-29!73;UBERON:0000073!2.97e-29!75;UBERON:0001016!2.97e-29!75;UBERON:0002020!6.82e-28!34;UBERON:0002346!8.49e-26!71;UBERON:0003075!8.49e-26!71;UBERON:0007284!8.49e-26!71;UBERON:0000955!2.22e-25!50;UBERON:0006238!2.22e-25!50;UBERON:0002616!1.63e-24!49;UBERON:0002791!1.46e-22!29;UBERON:0003528!1.46e-22!29;UBERON:0001893!1.46e-22!29;UBERON:0003080!4.39e-21!40;UBERON:0004121!7.89e-21!102;UBERON:0000924!7.89e-21!102;UBERON:0006601!7.89e-21!102;UBERON:0002780!4.09e-20!39;UBERON:0001890!4.09e-20!39;UBERON:0006240!4.09e-20!39;UBERON:0000033!6.88e-20!63;UBERON:0003056!8.47e-18!49;UBERON:0000956!1.28e-15!21;UBERON:0001869!1.28e-15!21;UBERON:0000203!1.28e-15!21;UBERON:0002021!1.38e-12!10;UBERON:0000411!1.38e-12!10;UBERON:0001950!1.38e-12!10;UBERON:0002619!2.10e-12!17;UBERON:0007811!4.16e-11!86;UBERON:0000153!3.83e-09!94;UBERON:0003076!9.51e-09!12;UBERON:0003057!9.51e-09!12;UBERON:0002420!4.18e-08!8;UBERON:0007245!4.18e-08!8;UBERON:0010009!4.18e-08!8;UBERON:0010011!4.18e-08!8;UBERON:0000454!4.18e-08!8;UBERON:0002240!1.60e-07!6;UBERON:0005174!1.60e-07!6;UBERON:0001137!1.60e-07!6;UBERON:0002298!4.92e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.07e-38,54;UBERON:0001049,4.24e-37,52;UBERON:0005068,4.24e-37,52;UBERON:0006241,4.24e-37,52;UBERON:0007135,4.24e-37,52;UBERON:0002020,1.56e-32,34;UBERON:0002346,6.84e-31,64;UBERON:0003075,6.84e-31,64;UBERON:0007284,6.84e-31,64;UBERON:0001017,1.75e-28,73;UBERON:0001016,1.56e-27,75;UBERON:0002616,2.16e-26,46;UBERON:0010371,3.20e-26,73;UBERON:0000955,1.05e-25,47;UBERON:0006238,1.05e-25,47;UBERON:0003528,3.46e-23,29;UBERON:0002791,3.46e-23,29;UBERON:0001893,3.46e-23,29;UBERON:0004121,1.10e-21,95;UBERON:0000924,1.10e-21,95;UBERON:0006601,1.10e-21,95;UBERON:0003080,1.38e-21,40;UBERON:0002780,5.14e-20,39;UBERON:0001890,5.14e-20,39;UBERON:0006240,5.14e-20,39;UBERON:0002021,6.93e-20,10;UBERON:0000411,6.93e-20,10;UBERON:0001950,6.93e-20,10;UBERON:0010314,2.35e-19,92;UBERON:0002619,2.67e-19,17;UBERON:0003056,2.11e-18,49;UBERON:0000956,7.43e-18,21;UBERON:0001869,7.43e-18,21;UBERON:0000203,7.43e-18,21;UBERON:0003076,5.25e-17,12;UBERON:0003057,5.25e-17,12;UBERON:0002240,1.38e-13,6;UBERON:0005174,1.38e-13,6;UBERON:0001137,1.38e-13,6;UBERON:0000025,3.59e-13,114;UBERON:0004111,7.45e-12,122;UBERON:0001948,1.34e-11,5;UBERON:0002315,1.34e-11,5;UBERON:0002950,5.18e-09,4;UBERON:0001891,5.18e-09,4;UBERON:0009616,5.18e-09,4;UBERON:0010286,5.18e-09,4;UBERON:0002257,1.01e-07,3;UBERON:0002038,4.54e-07,3;UBERON:0009663,4.54e-07,3;UBERON:0009661,4.54e-07,3;UBERON:0000125,4.54e-07,3;UBERON:0002308,4.54e-07,3;UBERON:0000483,6.49e-07,174;UBERON:0000119,9.34e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.933206510776299,0.405017814995072,0.420649922702764,2.57085885963423,1.32521124570968,0.244981598429908,1.15014565221884,0,0,2.17068474744819,2.4577045320999,0.527545150920775,0.457438218012048,0.52091337055676,1.67509799400829,1.12552522006336,1.98637722109853,2.94628585473668,2.42031857358475,1.86399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,1.75668478206928,1.25668024088073,0,0,0,0,1.9472783122627,1.83000241127451,1.00523481690292,4.34560800480691,5.62574006126727,1.0389402227978,1.29793010454206,0,0,0,0.420883711772948,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09840850835969,2.16099685996497,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.64096361229084,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,9.01908701894705,0,0,0,0.1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| ||
|EntrezGene=70363 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=Q9DAI6,Q8BLS3 | |||
|association_with_transcript=-47bp_to_ENSMUST00000022953,NM_177819,uc007wbi.1,uc011ztr.1_5end | |||
|description=CAGE_peak_3_at_Fam135b_5end | |||
|id=chr15:71558315..71558339,- | |||
|ontology_enrichment_celltype=CL:0000117!1.27e-16!23;CL:0000337!1.27e-16!23;CL:0000540!5.22e-14!33;CL:0000047!5.22e-14!33;CL:0000031!5.22e-14!33;CL:0000404!5.22e-14!33;CL:0000393!1.14e-10!39;CL:0000211!1.14e-10!39;CL:0002319!9.47e-10!43;CL:0000221!2.33e-09!44;CL:0000133!2.33e-09!44;CL:0000055!2.27e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.07e-10,23;CL:0000337,8.07e-10,23;CL:0002612,1.01e-07,3;CL:0002614,4.54e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.00e-29!52;UBERON:0005068!2.00e-29!52;UBERON:0006241!2.00e-29!52;UBERON:0007135!2.00e-29!52;UBERON:0001017!2.17e-29!73;UBERON:0005743!2.17e-29!73;UBERON:0000073!2.97e-29!75;UBERON:0001016!2.97e-29!75;UBERON:0002020!6.82e-28!34;UBERON:0002346!8.49e-26!71;UBERON:0003075!8.49e-26!71;UBERON:0007284!8.49e-26!71;UBERON:0000955!2.22e-25!50;UBERON:0006238!2.22e-25!50;UBERON:0002616!1.63e-24!49;UBERON:0002791!1.46e-22!29;UBERON:0003528!1.46e-22!29;UBERON:0001893!1.46e-22!29;UBERON:0003080!4.39e-21!40;UBERON:0004121!7.89e-21!102;UBERON:0000924!7.89e-21!102;UBERON:0006601!7.89e-21!102;UBERON:0002780!4.09e-20!39;UBERON:0001890!4.09e-20!39;UBERON:0006240!4.09e-20!39;UBERON:0000033!6.88e-20!63;UBERON:0003056!8.47e-18!49;UBERON:0000956!1.28e-15!21;UBERON:0001869!1.28e-15!21;UBERON:0000203!1.28e-15!21;UBERON:0002021!1.38e-12!10;UBERON:0000411!1.38e-12!10;UBERON:0001950!1.38e-12!10;UBERON:0002619!2.10e-12!17;UBERON:0007811!4.16e-11!86;UBERON:0000153!3.83e-09!94;UBERON:0003076!9.51e-09!12;UBERON:0003057!9.51e-09!12;UBERON:0002420!4.18e-08!8;UBERON:0007245!4.18e-08!8;UBERON:0010009!4.18e-08!8;UBERON:0010011!4.18e-08!8;UBERON:0000454!4.18e-08!8;UBERON:0002240!1.60e-07!6;UBERON:0005174!1.60e-07!6;UBERON:0001137!1.60e-07!6;UBERON:0002298!4.92e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.07e-38,54;UBERON:0001049,4.24e-37,52;UBERON:0005068,4.24e-37,52;UBERON:0006241,4.24e-37,52;UBERON:0007135,4.24e-37,52;UBERON:0002020,1.56e-32,34;UBERON:0002346,6.84e-31,64;UBERON:0003075,6.84e-31,64;UBERON:0007284,6.84e-31,64;UBERON:0001017,1.75e-28,73;UBERON:0001016,1.56e-27,75;UBERON:0002616,2.16e-26,46;UBERON:0010371,3.20e-26,73;UBERON:0000955,1.05e-25,47;UBERON:0006238,1.05e-25,47;UBERON:0003528,3.46e-23,29;UBERON:0002791,3.46e-23,29;UBERON:0001893,3.46e-23,29;UBERON:0004121,1.10e-21,95;UBERON:0000924,1.10e-21,95;UBERON:0006601,1.10e-21,95;UBERON:0003080,1.38e-21,40;UBERON:0002780,5.14e-20,39;UBERON:0001890,5.14e-20,39;UBERON:0006240,5.14e-20,39;UBERON:0002021,6.93e-20,10;UBERON:0000411,6.93e-20,10;UBERON:0001950,6.93e-20,10;UBERON:0010314,2.35e-19,92;UBERON:0002619,2.67e-19,17;UBERON:0003056,2.11e-18,49;UBERON:0000956,7.43e-18,21;UBERON:0001869,7.43e-18,21;UBERON:0000203,7.43e-18,21;UBERON:0003076,5.25e-17,12;UBERON:0003057,5.25e-17,12;UBERON:0002240,1.38e-13,6;UBERON:0005174,1.38e-13,6;UBERON:0001137,1.38e-13,6;UBERON:0000025,3.59e-13,114;UBERON:0004111,7.45e-12,122;UBERON:0001948,1.34e-11,5;UBERON:0002315,1.34e-11,5;UBERON:0002950,5.18e-09,4;UBERON:0001891,5.18e-09,4;UBERON:0009616,5.18e-09,4;UBERON:0010286,5.18e-09,4;UBERON:0002257,1.01e-07,3;UBERON:0002038,4.54e-07,3;UBERON:0009663,4.54e-07,3;UBERON:0009661,4.54e-07,3;UBERON:0000125,4.54e-07,3;UBERON:0002308,4.54e-07,3;UBERON:0000483,6.49e-07,174;UBERON:0000119,9.34e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.933206510776299,0.405017814995072,0.420649922702764,2.57085885963423,1.32521124570968,0.244981598429908,1.15014565221884,0,0,2.17068474744819,2.4577045320999,0.527545150920775,0.457438218012048,0.52091337055676,1.67509799400829,1.12552522006336,1.98637722109853,2.94628585473668,2.42031857358475,1.86399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,1.75668478206928,1.25668024088073,0,0,0,0,1.9472783122627,1.83000241127451,1.00523481690292,4.34560800480691,5.62574006126727,1.0389402227978,1.29793010454206,0,0,0,0.420883711772948,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09840850835969,2.16099685996497,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.64096361229084,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,9.01908701894705,0,0,0,0.129159823477731,0,0,0.13020438484395,0,1.93267296660805,8.3528701814781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90652579663893,4.60325236507177,5.15605962095457,5.499301834998,3.42541259885321,0.755393897389701,4.72515750162264,5.85417564191487,4.98456649882625,5.1776031175182,0,0,0,0.486213434136588,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.512201219238954,0.17230640686684,0,0.347652977834566,0,0.824171801606613,0.441596760403192,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.25384382367503,0.365855945745545,0.263069711437843,0.271608227691724,0,0,0.394017929502254,0,0.154936841185966,0.578719832943424,0.749431733813838,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p3@Fam135b | |||
}} |
Revision as of 10:47, 13 September 2013
Short description: | p3@Fam135b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam135b_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -47bp_to_ENSMUST00000022953, NM_177819, uc007wbi.1, uc011ztr.1_5end |
EntrezGene: | Fam135b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.07e-10 | 23 |
neuroblast (sensu Vertebrata) | 8.07e-10 | 23 |
neuron of the ventral spinal cord | 1.01e-07 | 3 |
neuron of the substantia nigra | 4.54e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.