FFCP PHASE1:Mm9::chr2:125684899..125684961,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69976|HGNC=|MCL_coexpression_id=2225|UniProt=Q8BUU7|association_with_transcript=0bp_to_NM_175154,uc008mde.1_5end|description=CAGE_peak_3_at_Galk2_5end|id=chr2:125684899..125684961,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.02e-20!50;UBERON:0006238!1.02e-20!50;UBERON:0001017!2.00e-20!73;UBERON:0005743!2.00e-20!73;UBERON:0002616!3.00e-20!49;UBERON:0001049!1.00e-19!52;UBERON:0005068!1.00e-19!52;UBERON:0006241!1.00e-19!52;UBERON:0007135!1.00e-19!52;UBERON:0000033!1.74e-19!63;UBERON:0000073!2.99e-19!75;UBERON:0001016!2.99e-19!75;UBERON:0002346!4.33e-19!71;UBERON:0003075!4.33e-19!71;UBERON:0007284!4.33e-19!71;UBERON:0003080!2.62e-17!40;UBERON:0002780!1.03e-16!39;UBERON:0001890!1.03e-16!39;UBERON:0006240!1.03e-16!39;UBERON:0003056!1.18e-16!49;UBERON:0004121!1.60e-15!102;UBERON:0000924!1.60e-15!102;UBERON:0006601!1.60e-15!102;UBERON:0002020!1.30e-12!34;UBERON:0002791!1.69e-12!29;UBERON:0003528!1.69e-12!29;UBERON:0001893!1.69e-12!29;UBERON:0000025!2.58e-10!114;UBERON:0004111!1.17e-09!122;UBERON:0002619!4.67e-09!17;UBERON:0007811!8.61e-09!86;UBERON:0000956!1.00e-08!21;UBERON:0001869!1.00e-08!21;UBERON:0000203!1.00e-08!21;UBERON:0002021!1.69e-07!10;UBERON:0000411!1.69e-07!10;UBERON:0001950!1.69e-07!10;UBERON:0000153!5.09e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.25e-21,73;UBERON:0000073,2.52e-21,54;UBERON:0001049,1.66e-20,52;UBERON:0005068,1.66e-20,52;UBERON:0006241,1.66e-20,52;UBERON:0007135,1.66e-20,52;UBERON:0000955,1.66e-20,47;UBERON:0006238,1.66e-20,47;UBERON:0002616,5.20e-20,46;UBERON:0001016,6.77e-20,75;UBERON:0002346,1.01e-19,64;UBERON:0003075,1.01e-19,64;UBERON:0007284,1.01e-19,64;UBERON:0003080,1.50e-18,40;UBERON:0002780,6.56e-18,39;UBERON:0001890,6.56e-18,39;UBERON:0006240,6.56e-18,39;UBERON:0003056,1.13e-17,49;UBERON:0010371,2.17e-16,73;UBERON:0004121,3.22e-15,95;UBERON:0000924,3.22e-15,95;UBERON:0006601,3.22e-15,95;UBERON:0003528,2.32e-13,29;UBERON:0002791,2.32e-13,29;UBERON:0001893,2.32e-13,29;UBERON:0002020,3.94e-13,34;UBERON:0010314,7.59e-11,92;UBERON:0000025,5.48e-10,114;UBERON:0002619,1.20e-09,17;UBERON:0004111,1.89e-09,122;UBERON:0000956,2.73e-09,21;UBERON:0001869,2.73e-09,21;UBERON:0000203,2.73e-09,21;UBERON:0002021,5.75e-08,10;UBERON:0000411,5.75e-08,10;UBERON:0001950,5.75e-08,10|phase1_expression=3.36312578920067,0.697950815278722,1.81999695755814,0.30246421130683,0,0.671517087647559,1.63528848416868,0.258246646883153,0,0,0,0.0797721589953364,0.513602189793617,0,0.333109761815663,0,0.699561878128147,0.630924330716475,0,0,9.69493507722195,0.695036658406197,1.56719873483361,1.27993938234725,1.14704640533585,1.14846392823004,0.86152399231815,0.861884930743556,1.52018735565099,0.504060259519861,1.55211357458713,0,0,0,1.1554064790051,2.1610503896604,0.408338712524738,0,0.7813353445238,1.0470474879476,1.17646297606203,0,0,0.755380907853464,1.4192770370732,1.10128051297009,0.782391344348039,4.36050312760893,4.17403747195497,6.22175677037707,1.95980990275508,1.43752564364972,0.167782606057736,0.725362142011344,0,0.514518872071894,0.286533439938757,0,1.82084814773638,1.5869729378161,1.90149421051854,0.338844532069132,1.77858959222228,0.449949858640699,0,0.7104801149461,5.69240209984969,14.6002956022191,1.03689612308478,1.62007125998029,1.05162480675691,1.42825492201902,2.20868540951614,1.10241719293459,1.34183659425531,1.83843757322004,3.30347642998166,3.83062014255563,2.91852413186863,3.95658863190582,3.56801810049398,3.12548022334056,3.90856198601933,5.06486349028512,3.51435969886663,0.883885756421003,2.56269025438385,1.86399445825301,0.530083353332288,0.755715601067855,2.31891590961342,0.860423876981386,0.679971333707751,1.07940638327563,1.94932925234301,0.896053774194671,1.96622188184453,1.70430322578058,0.519572009205738,0.35333957451034,2.67602497575693,1.28326477414318,0,0,2.59789249213457,2.28023878927589,1.51657333504435,1.82694207550496,0,1.92974780784272,1.21439728736295,0.913396434936424,1.61430848079241,1.50722640552623,1.29347577849275,1.25666591329675,0.988779870937496,1.01219549843938,0.884610551949874,0.647067399789637,0.662524555381181,0,0,2.34224637609238,2.51336048176146,1.27728527604296,1.55759661857696,1.19980546198682,1.27070227073065,5.39246301857362,9.15001205637253,4.27224797183739,7.99591872884472,8.69432554923124,4.1557608911912,6.16516799657479,0.611036183101898,1.7416975885413,4.0435641349388,1.26265113531884,1.82168620147785,0.689706313300419,1.80062129805349,1.20563854268572,1.63287597963187,1.5373646434182,2.15513966487376,1.29351685369508,0.646703978798527,1.13463648100692,0.703804496655795,0.876782929710299,0.556094498451196,1.0447564995665,1.02891068203972,1.39323986772945,2.1066395619397,1.02939162845886,0.284163499395593,1.03562886267751,1.40715635988658,0.720248245844059,0.710234206755631,0.196764231747404,0.771335564436891,0.465067889500816,1.3413670069981,0.817357396570186,0.493679549740441,0.656669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| ||
|EntrezGene=69976 | |||
|HGNC= | |||
|MCL_coexpression_id=2225 | |||
|UniProt=Q8BUU7 | |||
|association_with_transcript=0bp_to_NM_175154,uc008mde.1_5end | |||
|description=CAGE_peak_3_at_Galk2_5end | |||
|id=chr2:125684899..125684961,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.02e-20!50;UBERON:0006238!1.02e-20!50;UBERON:0001017!2.00e-20!73;UBERON:0005743!2.00e-20!73;UBERON:0002616!3.00e-20!49;UBERON:0001049!1.00e-19!52;UBERON:0005068!1.00e-19!52;UBERON:0006241!1.00e-19!52;UBERON:0007135!1.00e-19!52;UBERON:0000033!1.74e-19!63;UBERON:0000073!2.99e-19!75;UBERON:0001016!2.99e-19!75;UBERON:0002346!4.33e-19!71;UBERON:0003075!4.33e-19!71;UBERON:0007284!4.33e-19!71;UBERON:0003080!2.62e-17!40;UBERON:0002780!1.03e-16!39;UBERON:0001890!1.03e-16!39;UBERON:0006240!1.03e-16!39;UBERON:0003056!1.18e-16!49;UBERON:0004121!1.60e-15!102;UBERON:0000924!1.60e-15!102;UBERON:0006601!1.60e-15!102;UBERON:0002020!1.30e-12!34;UBERON:0002791!1.69e-12!29;UBERON:0003528!1.69e-12!29;UBERON:0001893!1.69e-12!29;UBERON:0000025!2.58e-10!114;UBERON:0004111!1.17e-09!122;UBERON:0002619!4.67e-09!17;UBERON:0007811!8.61e-09!86;UBERON:0000956!1.00e-08!21;UBERON:0001869!1.00e-08!21;UBERON:0000203!1.00e-08!21;UBERON:0002021!1.69e-07!10;UBERON:0000411!1.69e-07!10;UBERON:0001950!1.69e-07!10;UBERON:0000153!5.09e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.25e-21,73;UBERON:0000073,2.52e-21,54;UBERON:0001049,1.66e-20,52;UBERON:0005068,1.66e-20,52;UBERON:0006241,1.66e-20,52;UBERON:0007135,1.66e-20,52;UBERON:0000955,1.66e-20,47;UBERON:0006238,1.66e-20,47;UBERON:0002616,5.20e-20,46;UBERON:0001016,6.77e-20,75;UBERON:0002346,1.01e-19,64;UBERON:0003075,1.01e-19,64;UBERON:0007284,1.01e-19,64;UBERON:0003080,1.50e-18,40;UBERON:0002780,6.56e-18,39;UBERON:0001890,6.56e-18,39;UBERON:0006240,6.56e-18,39;UBERON:0003056,1.13e-17,49;UBERON:0010371,2.17e-16,73;UBERON:0004121,3.22e-15,95;UBERON:0000924,3.22e-15,95;UBERON:0006601,3.22e-15,95;UBERON:0003528,2.32e-13,29;UBERON:0002791,2.32e-13,29;UBERON:0001893,2.32e-13,29;UBERON:0002020,3.94e-13,34;UBERON:0010314,7.59e-11,92;UBERON:0000025,5.48e-10,114;UBERON:0002619,1.20e-09,17;UBERON:0004111,1.89e-09,122;UBERON:0000956,2.73e-09,21;UBERON:0001869,2.73e-09,21;UBERON:0000203,2.73e-09,21;UBERON:0002021,5.75e-08,10;UBERON:0000411,5.75e-08,10;UBERON:0001950,5.75e-08,10 | |||
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| |||
|short_description=p3@Galk2 | |||
}} | |||
Revision as of 21:56, 13 September 2013
| Short description: | p3@Galk2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Galk2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2225 |
| Association with transcript: | 0bp_to_NM_175154, uc008mde.1_5end |
| EntrezGene: | Galk2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
