FFCP PHASE1:Mm9::chr19:46470212..46470246,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54130|HGNC=|MCL_coexpression_id=60|UniProt=P61164,Q8R5C5|association_with_transcript=0bp_to_ENSMUST00000040270,NM_016860,uc008htm.1,uc012bmz.1_5end|description=CAGE_peak_1_at_Actr1a_5end|id=chr19:46470212..46470246,-|ontology_enrichment_celltype=CL:0000117!6.63e-14!23;CL:0000337!6.63e-14!23;CL:0000055!7.67e-13!50;CL:0002319!4.24e-12!43;CL:0000221!8.79e-12!44;CL:0000133!8.79e-12!44;CL:0000393!4.98e-09!39;CL:0000211!4.98e-09!39;CL:0000540!1.06e-07!33;CL:0000047!1.06e-07!33;CL:0000031!1.06e-07!33;CL:0000404!1.06e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.63e-14,23;CL:0000337,6.63e-14,23;CL:0002319,4.24e-12,43;CL:0000221,8.79e-12,44;CL:0000133,8.79e-12,44;CL:0000393,4.98e-09,39;CL:0000211,4.98e-09,39;CL:0000540,1.06e-07,33;CL:0000047,1.06e-07,33;CL:0000031,1.06e-07,33;CL:0000404,1.06e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.40e-21!75;UBERON:0001016!5.40e-21!75;UBERON:0004121!8.53e-20!102;UBERON:0000924!8.53e-20!102;UBERON:0006601!8.53e-20!102;UBERON:0001017!9.36e-20!73;UBERON:0005743!9.36e-20!73;UBERON:0001049!1.30e-19!52;UBERON:0005068!1.30e-19!52;UBERON:0006241!1.30e-19!52;UBERON:0007135!1.30e-19!52;UBERON:0000955!4.78e-18!50;UBERON:0006238!4.78e-18!50;UBERON:0002616!1.55e-17!49;UBERON:0000033!2.43e-17!63;UBERON:0002020!3.43e-17!34;UBERON:0002346!1.00e-15!71;UBERON:0003075!1.00e-15!71;UBERON:0007284!1.00e-15!71;UBERON:0002791!2.27e-14!29;UBERON:0003528!2.27e-14!29;UBERON:0001893!2.27e-14!29;UBERON:0003056!4.64e-14!49;UBERON:0003080!2.92e-13!40;UBERON:0002780!1.06e-12!39;UBERON:0001890!1.06e-12!39;UBERON:0006240!1.06e-12!39;UBERON:0007811!4.42e-11!86;UBERON:0000153!3.17e-10!94;UBERON:0000956!3.81e-10!21;UBERON:0001869!3.81e-10!21;UBERON:0000203!3.81e-10!21;UBERON:0002619!7.30e-08!17;UBERON:0003076!2.49e-07!12;UBERON:0003057!2.49e-07!12;UBERON:0000025!2.86e-07!114;UBERON:0004111!4.66e-07!122;UBERON:0000064!6.12e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.13e-22,95;UBERON:0000924,1.13e-22,95;UBERON:0006601,1.13e-22,95;UBERON:0001016,5.40e-21,75;UBERON:0000073,1.94e-20,54;UBERON:0001017,9.36e-20,73;UBERON:0001049,1.30e-19,52;UBERON:0005068,1.30e-19,52;UBERON:0006241,1.30e-19,52;UBERON:0007135,1.30e-19,52;UBERON:0002346,5.04e-19,64;UBERON:0003075,5.04e-19,64;UBERON:0007284,5.04e-19,64;UBERON:0010371,4.97e-18,73;UBERON:0002020,3.43e-17,34;UBERON:0000955,1.28e-16,47;UBERON:0006238,1.28e-16,47;UBERON:0002616,4.05e-16,46;UBERON:0010314,4.42e-16,92;UBERON:0003528,2.27e-14,29;UBERON:0002791,2.27e-14,29;UBERON:0001893,2.27e-14,29;UBERON:0003056,4.64e-14,49;UBERON:0003080,2.92e-13,40;UBERON:0002780,1.06e-12,39;UBERON:0001890,1.06e-12,39;UBERON:0006240,1.06e-12,39;UBERON:0000956,3.81e-10,21;UBERON:0001869,3.81e-10,21;UBERON:0000203,3.81e-10,21;UBERON:0002619,7.30e-08,17;UBERON:0003076,2.49e-07,12;UBERON:0003057,2.49e-07,12;UBERON:0000025,2.86e-07,114;UBERON:0000923,4.19e-07,291;UBERON:0010316,4.19e-07,291;UBERON:0005291,4.19e-07,291;UBERON:0006598,4.19e-07,291;UBERON:0010317,4.19e-07,291;UBERON:0002532,4.19e-07,291;UBERON:0004111,4.66e-07,122|phase1_expression=53.4897149330012,96.3172125084637,80.9898646113374,64.122412797048,79.1415253315229,55.9037975466593,57.0014843053083,58.2346188721509,69.9719949093784,67.8787126333781,27.9085288207573,28.0797999663584,64.0290729942709,67.051448655371,47.6346959396398,58.7178275430495,49.6688933470984,63.8810884850431,61.427266255371,51.3511478675617,126.034156003885,56.297969330902,59.2923521345383,96.3154385216308,93.3695773943382,75.7986192631827,76.6756353163153,74.9839889746894,108.693395929046,72.3326472411001,89.3573957940878,55.2476685909879,46.1298590688428,47.5445043046316,43.3277429626912,44.3846503107175,37.7713309085383,106.725565837911,80.4775404859515,84.8108465237553,82.940639812373,90.8450494994733,90.3049256637946,128.66654797104,119.726155770247,120.590216170225,125.182615095686,139.100049770725,146.970056249362,137.461938645518,117.028648478803,107.814423273729,66.2741293928059,54.4021606508508,51.422351268797,89.0117648684377,87.106165741382,78.3821580261712,190.177473208022,194.139689392836,164.1623335081,145.703148789727,113.829733902226,113.837314236097,124.597161683439,101.598656437292,129.427247743951,108.733780406,149.83148978575,186.578206774396,159.426320704348,162.821061110168,155.491452829936,173.691953286805,204.821771565971,140.640474351333,131.037898389273,122.196782547525,118.430637140564,210.88617408058,250.035729965386,173.464152395401,128.982545538638,111.426996786273,108.028361178205,128.163434681045,126.9955392728,152.474746685096,141.683707726387,177.290880010519,56.2337108081255,58.5088236347343,30.5987100168488,53.4306159721439,52.6318898132612,51.9711189032909,74.8568759302237,115.381328385345,102.095899808927,88.3348936275851,69.5766493696802,38.4979432242953,12.7402619853323,7.11066703153331,71.6585345747119,73.2210011223035,62.1795067368183,75.0188089754224,55.6716449841419,70.9553424729862,69.0471600529221,70.3315254901046,62.2661842591358,61.9470052671279,62.0868373676521,58.1836317856397,118.159194577031,85.3136205827479,86.6918340910877,65.5155742287007,59.4063684658459,61.094281895038,87.6041277725174,108.621675691284,108.702840836183,95.030024537596,51.6403186620516,25.7958174327165,52.0987930999565,150.689383241252,120.780159144117,212.230200718628,141.840645276898,132.716322354442,141.295870300501,125.412496351377,68.6397312351132,70.0411244534824,72.0259861535973,73.6546495602659,75.5999773613309,77.7069112985138,96.8734258352779,80.4763727242718,89.5360328831475,105.821932955286,100.35454700347,115.381703349601,81.0535653427487,69.023719261254,64.0462091956774,74.745744757803,81.1897967738746,78.7049896340096,75.1104797888994,44.5836757673425,54.0704154231191,39.8889256027809,51.1494298912067,64.2089894860056,73.8757088940453,73.105196953172,71.4969101467335,71.622180356055,77.4420906694639,85.8050256129005,79.4089268142873,93.9961006055714,88.039519703712,99.977985624169,92.9048557395507,89.1819923294527,99.2366521115549,91.6629840133339,126.804838984169,207.1469847195,134.150025891422,100.226764765483,56.0948098907665,58.2914046369701,59.2790322081629,56.2697033699126,65.8239009780816,85.6015317506516,101.074690108981,97.5017811966144,99.0260722673062,78.7867629282957,94.7525463398924,95.2748573173475,99.4235029423593,106.938863737595,71.6944665602649,62.9509304479606,71.0058734740407,55.1895098460802,50.6215991507503,61.3688424040287,65.3233428493578,55.64902578831,66.8814580604257,66.1408798620851,64.3302200779113,51.2214474548409,54.6434006414704,58.2392871076771,55.3808131390613,57.88251834058,52.9621771705353,49.4837356415394,51.8832725680113,52.1666685057355,43.1304619582064,44.6569137202204,50.8621407176734,56.8302475381001,56.1513904323585,65.1298753840546,91.4528291324693,58.3633548253093,75.778714045542,69.4257400820519,63.6010572861841,62.1448215109136,68.0804812933999,75.711855368826,85.9111535378741,87.2570877216173,80.6841129406885,87.0114201140569,89.4508206065339,95.1790805466346,67.8560777726725,89.2005321462684,63.4375912194557,58.2226534702986,165.04600650745,142.412199209527,86.0658463227546,95.1815395560486,67.8342671744952,64.812831553242,68.2892170812973,58.3083867004227,60.1556420022464,57.7476122809218,70.4370620914316,64.2962887404886,84.591584480556,127.885883935879,65.7182594514284,66.7746013752207,61.4083836762982,63.3485272214536,55.7529581027844,54.8684237710258,54.1159166966904,51.3005816936043,62.3086993978431,51.9565400025237,72.3599220871019,49.4405872089407,53.4746067577082,53.7262488490887,47.4383738587494,33.0033738394198,74.5562736600796,63.5615661930525,78.520721056132,74.5892881909941,66.147907148568,69.9205765000117,72.4015690649332,91.3394847343798,73.9215880400688,92.3587828966256,75.420712134797,85.0813065178037,99.139157991286,98.1894417830377,117.820503531096,110.959248227661,99.3949652907791,164.472242883322,56.5582615440892,60.6777391811874,62.0401666688534,69.507960634731,65.6132293060921,70.2348991744024,43.8544349384147,48.703105408633,53.0687899408987,67.7816138790731,63.5835347098082,63.2323542764499,69.55543948924,79.2444641894836,76.208534747416,81.4580652164317,74.9666843428797,76.4327350593367,104.85851339306,62.7552706217795,498.868250735508,47.3967450959413,53.9394678890138,54.6407839246774,61.9967152693109,54.4038724080306,60.6736923798548,43.2278557681914,42.3631751479872,206.796007427061,271.324265894909,90.6951916202872,69.3320236292361,63.2699496135336,59.6336577468079,64.9866905272958,75.4989148168807,76.2039149956602,84.6260990710327,81.1770257583107,79.4074925345098,90.1386095123354,86.4451402161604,83.800514068727,93.7352755496183,102.935594161306,45.5071204416833,75.5390672651785,62.9567311365294,82.8783358398097,76.3867675086311,67.9492526031553,105.040505748742,68.2138061488094,100.525827985838,121.525862437895,127.182803983546,121.843906281675,97.2817178074312,83.093328712867,99.2283075340755,109.87837358671,111.01989020113,98.3744592328458,86.8700099279559,77.8098503132011,84.000934031034,71.4733748180785,85.3125571895888,59.7491402462546,70.2299659853104,70.4639895757018,74.4532566253011,67.2174583291701,77.5646657664134,69.0372409473039,69.7629230650624,72.1563467602877,71.5071588497385,73.8255221488764,60.0280808394351,67.7111363827605,64.2854005253158,55.4939928906678,73.0311507580935,59.6318708695374,61.9934093863034,65.9872731510771,65.2178006278241,69.299363863283,68.4150618544169,63.1367307450823,67.3588404675474,62.8479344256667,59.4361440802112,66.3920211211298,61.7938875186231,67.0876522335233,71.5683526740034,124.655478391035,82.1099945643384,84.2294531869329,88.5664977478745,81.3982336551012,67.9372758367835|short_description=p1@Actr1a}} | ||
|EntrezGene=54130 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=P61164,Q8R5C5 | |||
|association_with_transcript=0bp_to_ENSMUST00000040270,NM_016860,uc008htm.1,uc012bmz.1_5end | |||
|description=CAGE_peak_1_at_Actr1a_5end | |||
|id=chr19:46470212..46470246,- | |||
|ontology_enrichment_celltype=CL:0000117!6.63e-14!23;CL:0000337!6.63e-14!23;CL:0000055!7.67e-13!50;CL:0002319!4.24e-12!43;CL:0000221!8.79e-12!44;CL:0000133!8.79e-12!44;CL:0000393!4.98e-09!39;CL:0000211!4.98e-09!39;CL:0000540!1.06e-07!33;CL:0000047!1.06e-07!33;CL:0000031!1.06e-07!33;CL:0000404!1.06e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.63e-14,23;CL:0000337,6.63e-14,23;CL:0002319,4.24e-12,43;CL:0000221,8.79e-12,44;CL:0000133,8.79e-12,44;CL:0000393,4.98e-09,39;CL:0000211,4.98e-09,39;CL:0000540,1.06e-07,33;CL:0000047,1.06e-07,33;CL:0000031,1.06e-07,33;CL:0000404,1.06e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.40e-21!75;UBERON:0001016!5.40e-21!75;UBERON:0004121!8.53e-20!102;UBERON:0000924!8.53e-20!102;UBERON:0006601!8.53e-20!102;UBERON:0001017!9.36e-20!73;UBERON:0005743!9.36e-20!73;UBERON:0001049!1.30e-19!52;UBERON:0005068!1.30e-19!52;UBERON:0006241!1.30e-19!52;UBERON:0007135!1.30e-19!52;UBERON:0000955!4.78e-18!50;UBERON:0006238!4.78e-18!50;UBERON:0002616!1.55e-17!49;UBERON:0000033!2.43e-17!63;UBERON:0002020!3.43e-17!34;UBERON:0002346!1.00e-15!71;UBERON:0003075!1.00e-15!71;UBERON:0007284!1.00e-15!71;UBERON:0002791!2.27e-14!29;UBERON:0003528!2.27e-14!29;UBERON:0001893!2.27e-14!29;UBERON:0003056!4.64e-14!49;UBERON:0003080!2.92e-13!40;UBERON:0002780!1.06e-12!39;UBERON:0001890!1.06e-12!39;UBERON:0006240!1.06e-12!39;UBERON:0007811!4.42e-11!86;UBERON:0000153!3.17e-10!94;UBERON:0000956!3.81e-10!21;UBERON:0001869!3.81e-10!21;UBERON:0000203!3.81e-10!21;UBERON:0002619!7.30e-08!17;UBERON:0003076!2.49e-07!12;UBERON:0003057!2.49e-07!12;UBERON:0000025!2.86e-07!114;UBERON:0004111!4.66e-07!122;UBERON:0000064!6.12e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.13e-22,95;UBERON:0000924,1.13e-22,95;UBERON:0006601,1.13e-22,95;UBERON:0001016,5.40e-21,75;UBERON:0000073,1.94e-20,54;UBERON:0001017,9.36e-20,73;UBERON:0001049,1.30e-19,52;UBERON:0005068,1.30e-19,52;UBERON:0006241,1.30e-19,52;UBERON:0007135,1.30e-19,52;UBERON:0002346,5.04e-19,64;UBERON:0003075,5.04e-19,64;UBERON:0007284,5.04e-19,64;UBERON:0010371,4.97e-18,73;UBERON:0002020,3.43e-17,34;UBERON:0000955,1.28e-16,47;UBERON:0006238,1.28e-16,47;UBERON:0002616,4.05e-16,46;UBERON:0010314,4.42e-16,92;UBERON:0003528,2.27e-14,29;UBERON:0002791,2.27e-14,29;UBERON:0001893,2.27e-14,29;UBERON:0003056,4.64e-14,49;UBERON:0003080,2.92e-13,40;UBERON:0002780,1.06e-12,39;UBERON:0001890,1.06e-12,39;UBERON:0006240,1.06e-12,39;UBERON:0000956,3.81e-10,21;UBERON:0001869,3.81e-10,21;UBERON:0000203,3.81e-10,21;UBERON:0002619,7.30e-08,17;UBERON:0003076,2.49e-07,12;UBERON:0003057,2.49e-07,12;UBERON:0000025,2.86e-07,114;UBERON:0000923,4.19e-07,291;UBERON:0010316,4.19e-07,291;UBERON:0005291,4.19e-07,291;UBERON:0006598,4.19e-07,291;UBERON:0010317,4.19e-07,291;UBERON:0002532,4.19e-07,291;UBERON:0004111,4.66e-07,122 | |||
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| |||
|short_description=p1@Actr1a | |||
}} |
Revision as of 17:51, 13 September 2013
Short description: | p1@Actr1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Actr1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000040270, NM_016860, uc008htm.1, uc012bmz.1_5end |
EntrezGene: | Actr1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.63e-14 | 23 |
neuroblast (sensu Vertebrata) | 6.63e-14 | 23 |
neural cell | 4.24e-12 | 43 |
ectodermal cell | 8.79e-12 | 44 |
neurectodermal cell | 8.79e-12 | 44 |
electrically responsive cell | 4.98e-09 | 39 |
electrically active cell | 4.98e-09 | 39 |
neuron | 1.06e-07 | 33 |
neuronal stem cell | 1.06e-07 | 33 |
neuroblast | 1.06e-07 | 33 |
electrically signaling cell | 1.06e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.