FFCP PHASE1:Hg19::chr11:70672823..70672840,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22941|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14295|TSSclassifier=S|UniProt=|association_with_transcript=21bp_to_ENST00000468619_5end|coexpression_cluster_id=C10|description=CAGE_peak_8_at_SHANK2_5end|id=chr11:70672823..70672840,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;1.07e-23;3!UBERON:0006601;1.47e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.21e-62!57;UBERON:0005068!2.21e-62!57;UBERON:0006241!2.21e-62!57;UBERON:0007135!2.21e-62!57;UBERON:0002616!2.47e-53!59;UBERON:0001017!3.73e-53!82;UBERON:0005743!9.07e-53!86;UBERON:0000955!2.32e-52!69;UBERON:0006238!2.32e-52!69;UBERON:0002780!1.75e-47!41;UBERON:0001890!1.75e-47!41;UBERON:0006240!1.75e-47!41;UBERON:0002619!3.87e-47!22;UBERON:0000073!9.43e-47!94;UBERON:0001016!9.43e-47!94;UBERON:0003080!3.46e-46!42;UBERON:0001893!1.63e-42!34;UBERON:0002020!4.94e-42!34;UBERON:0003528!4.94e-42!34;UBERON:0007023!5.41e-42!115;UBERON:0001950!6.81e-42!20;UBERON:0001869!1.00e-41!32;UBERON:0000956!5.08e-41!25;UBERON:0000203!5.08e-41!25;UBERON:0002346!2.97e-40!90;UBERON:0003075!3.01e-40!86;UBERON:0007284!3.01e-40!86;UBERON:0002791!4.63e-40!33;UBERON:0003056!7.70e-32!61;UBERON:0000033!5.01e-30!123;UBERON:0000153!1.02e-29!129;UBERON:0007811!1.02e-29!129;UBERON:0000924!5.65e-23!173;UBERON:0006601!5.65e-23!173;UBERON:0004121!1.77e-22!169;UBERON:0001871!2.65e-17!7;UBERON:0003076!1.27e-16!15;UBERON:0003057!1.27e-16!15;UBERON:0002021!4.25e-15!5;UBERON:0000349!6.72e-15!5;UBERON:0004733!1.21e-13!12;UBERON:0002028!1.21e-13!12;UBERON:0007277!1.21e-13!12;UBERON:0000025!4.10e-13!194;UBERON:0004732!1.75e-12!13;UBERON:0000200!6.23e-12!6;UBERON:0002680!1.04e-10!9;UBERON:0001895!1.04e-10!9;UBERON:0010092!1.04e-10!9;UBERON:0001872!6.76e-10!5;UBERON:0004111!2.32e-09!241;UBERON:0002771!5.07e-09!3;UBERON:0000988!2.78e-08!3;UBERON:0000475!3.30e-08!365;UBERON:0002298!4.81e-08!8;UBERON:0000064!1.44e-07!219;UBERON:0000477!1.50e-07!286;UBERON:0000481!2.87e-07!347;UBERON:0001954!6.23e-07!2;UBERON:0003022!6.23e-07!2;UBERON:0002421!6.23e-07!2;UBERON:0002600!6.23e-07!2;UBERON:0001876!6.41e-07!2|ontology_enrichment_uberon_v019=UBERON:0002619;1.75e-54;22!UBERON:0001950;4.79e-51;20!UBERON:0000956;6.08e-48;25!UBERON:0000203;6.08e-48;25!UBERON:0001869;1.62e-44;32!UBERON:0001893;5.08e-40;34!UBERON:0002791;2.03e-39;32!UBERON:0003528;1.44e-34;34!UBERON:0002020;1.44e-34;34!UBERON:0002780;5.51e-31;41!UBERON:0001890;5.51e-31;41!UBERON:0002021;3.26e-25;5!UBERON:0000073;2.11e-24;53!UBERON:0002616;2.11e-24;53!UBERON:0000955;6.78e-21;68!UBERON:0001017;9.41e-16;75!UBERON:0001016;7.72e-15;83!UBERON:0001872;1.59e-14;5!UBERON:0000349;3.03e-14;5!UBERON:0002037;3.80e-12;6!UBERON:0001871;1.10e-10;6!UBERON:0002022;2.60e-09;1!UBERON:0002581;6.21e-09;1!UBERON:0002902;6.21e-09;1!UBERON:0001882;6.21e-09;1!UBERON:0003112;6.21e-09;1!UBERON:0011158;6.21e-09;1!UBERON:0009899;6.21e-09;1!UBERON:0007190;6.21e-09;1!UBERON:0003128;6.21e-09;1!UBERON:0005403;6.21e-09;1!UBERON:0001703;6.21e-09;1!UBERON:0002241;6.21e-09;1!UBERON:0002680;2.90e-08;9!UBERON:0001895;2.90e-08;9!UBERON:0011216;3.99e-07;132!UBERON:0007023;4.96e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.01e-54,22;UBERON:0001950,6.90e-51,20;UBERON:0001869,8.52e-50,32;UBERON:0000956,6.89e-48,25;UBERON:0000203,6.89e-48,25;UBERON:0001893,8.44e-47,34;UBERON:0002791,2.78e-43,32;UBERON:0000073,6.44e-43,53;UBERON:0002616,6.44e-43,53;UBERON:0001017,4.10e-41,81;UBERON:0003528,1.14e-40,34;UBERON:0002020,1.14e-40,34;UBERON:0000955,1.46e-40,68;UBERON:0006238,1.46e-40,68;UBERON:0001049,1.72e-40,56;UBERON:0005068,1.72e-40,56;UBERON:0006241,1.72e-40,56;UBERON:0007135,1.72e-40,56;UBERON:0002780,1.48e-38,41;UBERON:0001890,1.48e-38,41;UBERON:0003080,1.48e-38,41;UBERON:0006240,1.48e-38,41;UBERON:0001016,9.81e-37,89;UBERON:0003075,8.41e-27,82;UBERON:0007284,8.41e-27,82;UBERON:0002346,2.02e-25,86;UBERON:0003056,3.01e-25,61;UBERON:0002021,6.90e-25,5;UBERON:0010371,1.67e-20,104;UBERON:0004121,1.17e-17,171;UBERON:0000924,1.17e-17,171;UBERON:0006601,1.17e-17,171;UBERON:0010314,1.67e-17,132;UBERON:0011216,2.61e-17,223;UBERON:0007023,2.77e-16,114;UBERON:0000349,1.60e-14,5;UBERON:0001872,2.20e-14,5;UBERON:0002037,4.27e-12,6;UBERON:0006215,4.27e-12,6;UBERON:0000025,5.88e-11,192;UBERON:0001871,8.47e-11,6;UBERON:0002022,2.60e-09,1;UBERON:0003112,3.88e-09,1;UBERON:0011158,3.88e-09,1;UBERON:0003128,3.88e-09,1;UBERON:0001703,3.88e-09,1;UBERON:0002241,3.88e-09,1;UBERON:0004761,3.88e-09,1;UBERON:0009617,3.88e-09,1;UBERON:0007190,5.31e-09,1;UBERON:0001882,5.75e-09,1;UBERON:0005403,5.75e-09,1;UBERON:0002581,7.85e-09,1;UBERON:0002902,8.49e-09,1;UBERON:0009899,8.49e-09,1;UBERON:0002680,3.13e-08,9;UBERON:0001895,3.13e-08,9;UBERON:0010092,3.13e-08,9;UBERON:0004111,4.47e-08,240|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22941 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=21bp_to_ENST00000468619_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_8_at_SHANK2_5end | |||
|id=chr11:70672823..70672840,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.07e-23;3!UBERON:0006601;1.47e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p8@SHANK2 | |||
}} |
Revision as of 19:27, 10 September 2013
Short description: | p8@SHANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SHANK2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 21bp_to_ENST00000468619_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.