FFCP PHASE1:Hg19::chr20:62129135..62129160,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1917|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3192|TSSclassifier=S|UniProt=Q05639|association_with_transcript=26bp_to_ENST00000298049_5end|coexpression_cluster_id=C1873|description=CAGE_peak_7_at_EEF1A2_5end|id=chr20:62129135..62129160,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!1.21e-11!143;DOID:305!3.58e-08!106|ontology_enrichment_disease_v019=DOID:5093;5.09e-10;4!DOID:1612;5.09e-10;4!DOID:114;4.97e-09;2|ontology_enrichment_disease_v019_2=DOID:5093,5.58e-10,4;DOID:1612,5.58e-10,4;DOID:114,4.08e-09,2|ontology_enrichment_uberon=UBERON:0005743!1.69e-28!86;UBERON:0001017!2.02e-28!82;UBERON:0007023!5.15e-28!115;UBERON:0000073!3.71e-27!94;UBERON:0001016!3.71e-27!94;UBERON:0001049!1.05e-25!57;UBERON:0005068!1.05e-25!57;UBERON:0006241!1.05e-25!57;UBERON:0007135!1.05e-25!57;UBERON:0000955!1.65e-23!69;UBERON:0006238!1.65e-23!69;UBERON:0002780!3.38e-23!41;UBERON:0001890!3.38e-23!41;UBERON:0006240!3.38e-23!41;UBERON:0001893!1.59e-22!34;UBERON:0002020!1.63e-22!34;UBERON:0003528!1.63e-22!34;UBERON:0003080!2.19e-22!42;UBERON:0002791!1.52e-21!33;UBERON:0002616!2.12e-21!59;UBERON:0001869!4.70e-21!32;UBERON:0002346!8.11e-21!90;UBERON:0003075!2.80e-20!86;UBERON:0007284!2.80e-20!86;UBERON:0001950!1.38e-18!20;UBERON:0002619!2.83e-18!22;UBERON:0000956!8.65e-17!25;UBERON:0000203!8.65e-17!25;UBERON:0000924!4.16e-15!173;UBERON:0006601!4.16e-15!173;UBERON:0003056!4.87e-15!61;UBERON:0004121!1.60e-14!169;UBERON:0000153!1.38e-11!129;UBERON:0007811!1.38e-11!129;UBERON:0000033!2.93e-11!123;UBERON:0000200!4.55e-08!6;UBERON:0001871!7.48e-08!7;UBERON:0000025!2.32e-07!194;UBERON:0002420!2.47e-07!9;UBERON:0007245!2.47e-07!9;UBERON:0010009!2.47e-07!9;UBERON:0010011!2.47e-07!9;UBERON:0000454!2.47e-07!9;UBERON:0002308!3.54e-07!9;UBERON:0000125!3.54e-07!9|ontology_enrichment_uberon_v019=UBERON:0001950;2.66e-13;20!UBERON:0002619;5.28e-12;22!UBERON:0000956;1.97e-10;25!UBERON:0000203;1.97e-10;25!UBERON:0001871;3.87e-09;6!UBERON:0000341;5.39e-09;2!UBERON:0007100;7.87e-09;25!UBERON:0001869;8.80e-08;32!UBERON:0001893;1.47e-07;34!UBERON:0002791;1.92e-07;32!UBERON:0001017;2.81e-07;75!UBERON:0001872;3.08e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.16e-17,114;UBERON:0001950,1.87e-13,20;UBERON:0001017,2.30e-12,81;UBERON:0002619,3.83e-12,22;UBERON:0001016,1.01e-10,89;UBERON:0000956,1.49e-10,25;UBERON:0000203,1.49e-10,25;UBERON:0001871,2.38e-09,6;UBERON:0000955,3.76e-09,68;UBERON:0006238,3.76e-09,68;UBERON:0000341,7.42e-09,2;UBERON:0001049,1.24e-08,56;UBERON:0005068,1.24e-08,56;UBERON:0006241,1.24e-08,56;UBERON:0007135,1.24e-08,56;UBERON:0007100,3.94e-08,27;UBERON:0002791,5.61e-08,32;UBERON:0001869,5.61e-08,32;UBERON:0010314,6.39e-08,132;UBERON:0000073,7.62e-08,53;UBERON:0002616,7.62e-08,53;UBERON:0002346,1.16e-07,86;UBERON:0003528,1.97e-07,34;UBERON:0002020,1.97e-07,34;UBERON:0001893,1.97e-07,34;UBERON:0002780,2.19e-07,41;UBERON:0001890,2.19e-07,41;UBERON:0003080,2.19e-07,41;UBERON:0006240,2.19e-07,41;UBERON:0001872,3.12e-07,5;UBERON:0004121,3.51e-07,171;UBERON:0000924,3.51e-07,171;UBERON:0006601,3.51e-07,171;UBERON:0003075,4.06e-07,82;UBERON:0007284,4.06e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1608175918371,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0.335032530668698,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.27470839445503,0.41254749960294,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,0,0,1.25966373927138,0.20453736500431,0,0,0,0.537063524026827,0,0,0,0,3.87733098438087,3.24688343566479,1.996137980011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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1917 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3192 | |||
|TSSclassifier=S | |||
|UniProt=Q05639 | |||
|association_with_transcript=26bp_to_ENST00000298049_5end | |||
|coexpression_cluster_id=C1873 | |||
|description=CAGE_peak_7_at_EEF1A2_5end | |||
|id=chr20:62129135..62129160,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.21e-11!143;DOID:305!3.58e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.09e-10;4!DOID:1612;5.09e-10;4!DOID:114;4.97e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.58e-10,4;DOID:1612,5.58e-10,4;DOID:114,4.08e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.69e-28!86;UBERON:0001017!2.02e-28!82;UBERON:0007023!5.15e-28!115;UBERON:0000073!3.71e-27!94;UBERON:0001016!3.71e-27!94;UBERON:0001049!1.05e-25!57;UBERON:0005068!1.05e-25!57;UBERON:0006241!1.05e-25!57;UBERON:0007135!1.05e-25!57;UBERON:0000955!1.65e-23!69;UBERON:0006238!1.65e-23!69;UBERON:0002780!3.38e-23!41;UBERON:0001890!3.38e-23!41;UBERON:0006240!3.38e-23!41;UBERON:0001893!1.59e-22!34;UBERON:0002020!1.63e-22!34;UBERON:0003528!1.63e-22!34;UBERON:0003080!2.19e-22!42;UBERON:0002791!1.52e-21!33;UBERON:0002616!2.12e-21!59;UBERON:0001869!4.70e-21!32;UBERON:0002346!8.11e-21!90;UBERON:0003075!2.80e-20!86;UBERON:0007284!2.80e-20!86;UBERON:0001950!1.38e-18!20;UBERON:0002619!2.83e-18!22;UBERON:0000956!8.65e-17!25;UBERON:0000203!8.65e-17!25;UBERON:0000924!4.16e-15!173;UBERON:0006601!4.16e-15!173;UBERON:0003056!4.87e-15!61;UBERON:0004121!1.60e-14!169;UBERON:0000153!1.38e-11!129;UBERON:0007811!1.38e-11!129;UBERON:0000033!2.93e-11!123;UBERON:0000200!4.55e-08!6;UBERON:0001871!7.48e-08!7;UBERON:0000025!2.32e-07!194;UBERON:0002420!2.47e-07!9;UBERON:0007245!2.47e-07!9;UBERON:0010009!2.47e-07!9;UBERON:0010011!2.47e-07!9;UBERON:0000454!2.47e-07!9;UBERON:0002308!3.54e-07!9;UBERON:0000125!3.54e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.66e-13;20!UBERON:0002619;5.28e-12;22!UBERON:0000956;1.97e-10;25!UBERON:0000203;1.97e-10;25!UBERON:0001871;3.87e-09;6!UBERON:0000341;5.39e-09;2!UBERON:0007100;7.87e-09;25!UBERON:0001869;8.80e-08;32!UBERON:0001893;1.47e-07;34!UBERON:0002791;1.92e-07;32!UBERON:0001017;2.81e-07;75!UBERON:0001872;3.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.16e-17,114;UBERON:0001950,1.87e-13,20;UBERON:0001017,2.30e-12,81;UBERON:0002619,3.83e-12,22;UBERON:0001016,1.01e-10,89;UBERON:0000956,1.49e-10,25;UBERON:0000203,1.49e-10,25;UBERON:0001871,2.38e-09,6;UBERON:0000955,3.76e-09,68;UBERON:0006238,3.76e-09,68;UBERON:0000341,7.42e-09,2;UBERON:0001049,1.24e-08,56;UBERON:0005068,1.24e-08,56;UBERON:0006241,1.24e-08,56;UBERON:0007135,1.24e-08,56;UBERON:0007100,3.94e-08,27;UBERON:0002791,5.61e-08,32;UBERON:0001869,5.61e-08,32;UBERON:0010314,6.39e-08,132;UBERON:0000073,7.62e-08,53;UBERON:0002616,7.62e-08,53;UBERON:0002346,1.16e-07,86;UBERON:0003528,1.97e-07,34;UBERON:0002020,1.97e-07,34;UBERON:0001893,1.97e-07,34;UBERON:0002780,2.19e-07,41;UBERON:0001890,2.19e-07,41;UBERON:0003080,2.19e-07,41;UBERON:0006240,2.19e-07,41;UBERON:0001872,3.12e-07,5;UBERON:0004121,3.51e-07,171;UBERON:0000924,3.51e-07,171;UBERON:0006601,3.51e-07,171;UBERON:0003075,4.06e-07,82;UBERON:0007284,4.06e-07,82 | |||
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|short_description=p7@EEF1A2 | |||
}} |
Revision as of 09:36, 12 September 2013
Short description: | p7@EEF1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_EEF1A2_5end |
Coexpression cluster: | C1873_skeletal_MCF7_serous_left_brain_heart_tongue |
Association with transcript: | 26bp_to_ENST00000298049_5end |
EntrezGene: | EEF1A2 |
HGNC: | 3192 |
UniProt: | Q05639 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.16e-17 | 114 |
neocortex | 1.87e-13 | 20 |
central nervous system | 2.30e-12 | 81 |
regional part of cerebral cortex | 3.83e-12 | 22 |
nervous system | 1.01e-10 | 89 |
cerebral cortex | 1.49e-10 | 25 |
pallium | 1.49e-10 | 25 |
temporal lobe | 2.38e-09 | 6 |
brain | 3.76e-09 | 68 |
future brain | 3.76e-09 | 68 |
throat | 7.42e-09 | 2 |
neural tube | 1.24e-08 | 56 |
neural rod | 1.24e-08 | 56 |
future spinal cord | 1.24e-08 | 56 |
neural keel | 1.24e-08 | 56 |
primary circulatory organ | 3.94e-08 | 27 |
regional part of telencephalon | 5.61e-08 | 32 |
cerebral hemisphere | 5.61e-08 | 32 |
structure with developmental contribution from neural crest | 6.39e-08 | 132 |
regional part of nervous system | 7.62e-08 | 53 |
regional part of brain | 7.62e-08 | 53 |
neurectoderm | 1.16e-07 | 86 |
brain grey matter | 1.97e-07 | 34 |
gray matter | 1.97e-07 | 34 |
telencephalon | 1.97e-07 | 34 |
regional part of forebrain | 2.19e-07 | 41 |
forebrain | 2.19e-07 | 41 |
anterior neural tube | 2.19e-07 | 41 |
future forebrain | 2.19e-07 | 41 |
parietal lobe | 3.12e-07 | 5 |
ectoderm-derived structure | 3.51e-07 | 171 |
ectoderm | 3.51e-07 | 171 |
presumptive ectoderm | 3.51e-07 | 171 |
neural plate | 4.06e-07 | 82 |
presumptive neural plate | 4.06e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.58e-10 | 4 |
breast cancer | 5.58e-10 | 4 |
heart disease | 4.08e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.