FFCP PHASE1:Hg19::chr6:6007096..6007107,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51299|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17972|TSSclassifier=S|UniProt=Q9NPD7|association_with_transcript=92bp_to_ENST00000244766_5end|coexpression_cluster_id=C1087|description=CAGE_peak_4_at_NRN1_5end|id=chr6:6007096..6007107,-|ontology_enrichment_celltype=CL:0002620!2.13e-10!23;CL:0000136!1.31e-07!15|ontology_enrichment_celltype_v019=CL:0002620;1.41e-13;23!CL:0000136;8.09e-10;13|ontology_enrichment_celltype_v019_2=CL:0002620,1.50e-13,23;CL:0000136,1.55e-10,15|ontology_enrichment_development_v019=UBERON:0006601;3.90e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;1.48e-10;5!DOID:450;1.48e-10;5!DOID:66;1.48e-10;5!DOID:423;1.48e-10;5!DOID:0080000;1.48e-10;5!DOID:11722;1.48e-10;5|ontology_enrichment_disease_v019_2=DOID:17,1.74e-10,5;DOID:450,1.74e-10,5;DOID:66,1.74e-10,5;DOID:423,1.74e-10,5;DOID:0080000,1.74e-10,5;DOID:11722,1.74e-10,5|ontology_enrichment_uberon=UBERON:0001049!9.82e-26!57;UBERON:0005068!9.82e-26!57;UBERON:0006241!9.82e-26!57;UBERON:0007135!9.82e-26!57;UBERON:0001017!1.08e-25!82;UBERON:0000073!1.13e-24!94;UBERON:0001016!1.13e-24!94;UBERON:0005743!1.30e-24!86;UBERON:0000955!3.96e-24!69;UBERON:0006238!3.96e-24!69;UBERON:0002616!6.13e-23!59;UBERON:0002780!5.85e-22!41;UBERON:0001890!5.85e-22!41;UBERON:0006240!5.85e-22!41;UBERON:0002619!8.43e-22!22;UBERON:0003080!4.18e-21!42;UBERON:0007023!1.00e-20!115;UBERON:0001950!4.45e-20!20;UBERON:0002346!5.28e-20!90;UBERON:0000956!4.27e-18!25;UBERON:0000203!4.27e-18!25;UBERON:0001893!4.77e-18!34;UBERON:0002020!8.19e-18!34;UBERON:0003528!8.19e-18!34;UBERON:0003075!1.53e-17!86;UBERON:0007284!1.53e-17!86;UBERON:0001869!2.56e-17!32;UBERON:0002791!3.98e-17!33;UBERON:0003056!1.17e-14!61;UBERON:0000924!8.37e-13!173;UBERON:0006601!8.37e-13!173;UBERON:0004121!3.94e-11!169;UBERON:0000033!5.42e-11!123;UBERON:0002199!6.19e-10!45;UBERON:0002416!6.19e-10!45;UBERON:0000153!1.20e-09!129;UBERON:0007811!1.20e-09!129;UBERON:0001871!2.51e-08!7;UBERON:0002097!2.05e-07!40;UBERON:0000200!2.57e-07!6|ontology_enrichment_uberon_v019=UBERON:0002619;1.43e-40;22!UBERON:0001950;3.03e-37;20!UBERON:0000956;5.26e-35;25!UBERON:0000203;5.26e-35;25!UBERON:0001869;1.70e-28;32!UBERON:0003528;4.65e-27;34!UBERON:0002020;4.65e-27;34!UBERON:0002791;1.28e-25;32!UBERON:0001893;2.01e-25;34!UBERON:0000073;4.20e-20;53!UBERON:0002616;4.20e-20;53!UBERON:0002780;2.48e-19;41!UBERON:0001890;2.48e-19;41!UBERON:0001017;2.80e-14;75!UBERON:0000955;5.52e-14;68!UBERON:0001871;6.15e-13;6!UBERON:0000200;1.58e-12;6!UBERON:0001016;1.72e-11;83!UBERON:0004733;1.07e-10;12!UBERON:0002028;1.07e-10;12!UBERON:0002298;3.03e-10;6!UBERON:0001872;3.80e-10;5!UBERON:0002021;5.75e-10;5!UBERON:0000349;7.41e-10;5!UBERON:0004732;9.97e-10;13!UBERON:0002199;6.26e-08;46!UBERON:0002416;6.26e-08;46!UBERON:0002097;6.63e-08;41!UBERON:0002346;1.89e-07;4!UBERON:0000923;1.89e-07;4!UBERON:0010316;1.89e-07;4!UBERON:0005291;1.89e-07;4!UBERON:0001870;3.45e-07;3!UBERON:0002680;7.46e-07;9!UBERON:0001895;7.46e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.53e-40,22;UBERON:0001950,5.19e-37,20;UBERON:0000073,2.01e-36,53;UBERON:0002616,2.01e-36,53;UBERON:0001049,5.17e-36,56;UBERON:0005068,5.17e-36,56;UBERON:0006241,5.17e-36,56;UBERON:0007135,5.17e-36,56;UBERON:0000956,8.65e-35,25;UBERON:0000203,8.65e-35,25;UBERON:0000955,6.77e-33,68;UBERON:0006238,6.77e-33,68;UBERON:0001017,1.41e-32,81;UBERON:0001869,2.25e-31,32;UBERON:0003528,8.22e-31,34;UBERON:0002020,8.22e-31,34;UBERON:0001016,1.76e-29,89;UBERON:0001893,4.11e-29,34;UBERON:0002791,1.79e-28,32;UBERON:0002346,4.31e-28,86;UBERON:0002780,3.79e-27,41;UBERON:0001890,3.79e-27,41;UBERON:0003080,3.79e-27,41;UBERON:0006240,3.79e-27,41;UBERON:0003075,8.27e-24,82;UBERON:0007284,8.27e-24,82;UBERON:0010371,5.47e-20,104;UBERON:0003056,2.49e-18,61;UBERON:0004121,1.43e-16,171;UBERON:0000924,1.43e-16,171;UBERON:0006601,1.43e-16,171;UBERON:0007023,1.06e-14,114;UBERON:0010314,2.74e-13,132;UBERON:0001871,8.15e-13,6;UBERON:0000200,1.46e-12,6;UBERON:0002199,1.88e-11,46;UBERON:0002416,1.88e-11,46;UBERON:0004733,2.03e-10,12;UBERON:0002028,2.03e-10,12;UBERON:0007277,2.03e-10,12;UBERON:0001872,3.15e-10,5;UBERON:0003076,7.10e-10,15;UBERON:0003057,7.10e-10,15;UBERON:0002298,8.25e-10,6;UBERON:0002021,9.02e-10,5;UBERON:0000349,9.72e-10,5;UBERON:0004732,1.79e-09,13;UBERON:0002097,2.10e-09,41;UBERON:0001870,3.31e-07,3;UBERON:0011216,9.96e-07,223|phase1_expression=1.45342703416445,3.8538094300377,0,3.00219895059391,0,0,2.53299878168311,1.89515962028049,1.82829939739887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.328402357799783,0.157421562627358,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,1.73815822752988,5.5670016293577,4.37971383272372,0,0,0,1.57174890597255,0.364295288292542,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17972 | |||
|TSSclassifier=S | |||
|UniProt=Q9NPD7 | |||
|association_with_transcript=92bp_to_ENST00000244766_5end | |||
|coexpression_cluster_id=C1087 | |||
|description=CAGE_peak_4_at_NRN1_5end | |||
|id=chr6:6007096..6007107,- | |||
|ontology_enrichment_celltype=CL:0002620!2.13e-10!23;CL:0000136!1.31e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.41e-13;23!CL:0000136;8.09e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.50e-13,23;CL:0000136,1.55e-10,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.90e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.48e-10;5!DOID:450;1.48e-10;5!DOID:66;1.48e-10;5!DOID:423;1.48e-10;5!DOID:0080000;1.48e-10;5!DOID:11722;1.48e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.74e-10,5;DOID:450,1.74e-10,5;DOID:66,1.74e-10,5;DOID:423,1.74e-10,5;DOID:0080000,1.74e-10,5;DOID:11722,1.74e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.82e-26!57;UBERON:0005068!9.82e-26!57;UBERON:0006241!9.82e-26!57;UBERON:0007135!9.82e-26!57;UBERON:0001017!1.08e-25!82;UBERON:0000073!1.13e-24!94;UBERON:0001016!1.13e-24!94;UBERON:0005743!1.30e-24!86;UBERON:0000955!3.96e-24!69;UBERON:0006238!3.96e-24!69;UBERON:0002616!6.13e-23!59;UBERON:0002780!5.85e-22!41;UBERON:0001890!5.85e-22!41;UBERON:0006240!5.85e-22!41;UBERON:0002619!8.43e-22!22;UBERON:0003080!4.18e-21!42;UBERON:0007023!1.00e-20!115;UBERON:0001950!4.45e-20!20;UBERON:0002346!5.28e-20!90;UBERON:0000956!4.27e-18!25;UBERON:0000203!4.27e-18!25;UBERON:0001893!4.77e-18!34;UBERON:0002020!8.19e-18!34;UBERON:0003528!8.19e-18!34;UBERON:0003075!1.53e-17!86;UBERON:0007284!1.53e-17!86;UBERON:0001869!2.56e-17!32;UBERON:0002791!3.98e-17!33;UBERON:0003056!1.17e-14!61;UBERON:0000924!8.37e-13!173;UBERON:0006601!8.37e-13!173;UBERON:0004121!3.94e-11!169;UBERON:0000033!5.42e-11!123;UBERON:0002199!6.19e-10!45;UBERON:0002416!6.19e-10!45;UBERON:0000153!1.20e-09!129;UBERON:0007811!1.20e-09!129;UBERON:0001871!2.51e-08!7;UBERON:0002097!2.05e-07!40;UBERON:0000200!2.57e-07!6 | |||
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| |||
|short_description=p4@NRN1 | |||
}} |
Revision as of 21:33, 13 September 2013
Short description: | p4@NRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NRN1_5end |
Coexpression cluster: | C1087_neuroectodermal_Fibroblast_renal_occipital_carcinoid_frontal_postcentral |
Association with transcript: | 92bp_to_ENST00000244766_5end |
EntrezGene: | NRN1 |
HGNC: | 17972 |
UniProt: | Q9NPD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.50e-13 | 23 |
fat cell | 1.55e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.74e-10 | 5 |
myotonic disease | 1.74e-10 | 5 |
muscle tissue disease | 1.74e-10 | 5 |
myopathy | 1.74e-10 | 5 |
muscular disease | 1.74e-10 | 5 |
myotonic dystrophy | 1.74e-10 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.