FFCP PHASE1:Hg19::chr6:44215640..44215666,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3326|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5258|TSSclassifier=S|UniProt=P08238|association_with_transcript=37bp_to_ENST00000371554_5end|description=CAGE_peak_16_at_HSP90AB1_5end|id=chr6:44215640..44215666,+|ontology_enrichment_celltype=CL:0000860!1.44e-14!45;CL:0002057!1.36e-13!42;CL:0000557!1.94e-11!71;CL:0000839!4.85e-11!70;CL:0002009!2.96e-09!65;CL:0000763!3.10e-09!112;CL:0000049!3.10e-09!112;CL:0002194!3.36e-09!63;CL:0000576!3.36e-09!63;CL:0000040!3.36e-09!63;CL:0000559!3.36e-09!63;CL:0000766!3.80e-09!76|ontology_enrichment_celltype_v019=CL:0000860;1.13e-30;33!CL:0002057;1.13e-30;33!CL:0000473;6.92e-24;39!CL:0000234;6.92e-24;39!CL:0000576;1.44e-14;48!CL:0000097;1.08e-11;5!CL:0000766;1.16e-11;69|ontology_enrichment_celltype_v019_2=CL:0000839,6.50e-26,66;CL:0000860,8.27e-26,42;CL:0002057,8.27e-26,42;CL:0000557,1.78e-25,67;CL:0000766,1.79e-23,72;CL:0000473,3.15e-22,48;CL:0000234,3.15e-22,48;CL:0002194,7.50e-20,59;CL:0000576,7.50e-20,59;CL:0000040,7.50e-20,59;CL:0000559,7.50e-20,59;CL:0002009,4.12e-19,61;CL:0000763,3.10e-18,108;CL:0000049,3.10e-18,108;CL:0002031,1.13e-12,120;CL:0000097,6.95e-12,5;CL:0002028,6.95e-12,5;CL:0002032,6.46e-11,161;CL:0000837,6.46e-11,161;CL:0000988,8.69e-11,177;CL:0000738,9.27e-11,136;CL:0000037,2.71e-10,168;CL:0002087,8.38e-09,115;CL:0000163,8.49e-07,9|ontology_enrichment_development_v019=CL:0002057;2.77e-19;42!UBERON:0005754;2.49e-07;1!UBERON:0005425;2.49e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060085;2.49e-07;1!DOID:3165;2.49e-07;1!DOID:0060121;2.49e-07;1!DOID:2438;2.49e-07;1!DOID:4418;2.49e-07;1|ontology_enrichment_disease_v019_2=DOID:0060085,3.62e-07,1;DOID:3165,3.62e-07,1;DOID:0060121,3.62e-07,1;DOID:2438,3.62e-07,1;DOID:4418,3.62e-07,1|ontology_enrichment_uberon=UBERON:0002371!1.13e-08!80;UBERON:0001474!1.27e-07!86;UBERON:0002390!8.40e-07!102;UBERON:0003061!8.40e-07!102|ontology_enrichment_uberon_v019=UBERON:0000996;7.99e-08;1!UBERON:0000998;2.49e-07;1!UBERON:0000941;2.49e-07;1!UBERON:0001785;2.49e-07;1!UBERON:0002464;2.49e-07;1!UBERON:0004904;2.49e-07;1!UBERON:0006868;2.49e-07;1!UBERON:0001021;2.49e-07;1!UBERON:0000473;2.74e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.65e-22,76;UBERON:0002390,1.08e-20,98;UBERON:0003061,1.08e-20,98;UBERON:0001474,3.42e-20,82;UBERON:0002405,1.18e-19,93;UBERON:0002193,2.07e-18,108;UBERON:0004765,4.37e-18,90;UBERON:0001434,6.36e-16,100;UBERON:0003081,4.90e-10,203;UBERON:0002204,4.24e-08,167;UBERON:0000996,7.50e-08,1;UBERON:0000941,2.35e-07,1;UBERON:0001785,2.35e-07,1;UBERON:0002464,2.35e-07,1;UBERON:0004904,2.35e-07,1;UBERON:0001021,2.35e-07,1;UBERON:0003902,2.35e-07,1;UBERON:0005425,2.35e-07,1;UBERON:0000473,3.00e-07,8;UBERON:0000998,3.01e-07,1;UBERON:0006868,3.01e-07,1;UBERON:0000926,3.83e-07,315;UBERON:0004120,3.83e-07,315;UBERON:0006603,3.83e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.755751887377619,1.94067248950253,1.16214518452842,0.411167888021826,2.16794459626573,0.863077176966451,0.512321413058201,2.83778675866302,1.72372840368309,2.5819387343353,1.35426486594342,0.188242339542605,0.545812300115692,3.14612878223118,0.918251677112708,0.641858054152187,7.03270838378945,0.659702600373432,0.398927315243264,1.70489900213078,0,0.56738522469114,0.622822248995575,1.00499466102697,1.5644487552606,2.38907729175628,0,0.736555271975129,1.26584954976354,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.982343066232845,0,0,0,0.348259474598534,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0,0,1.18800285728205,0,0,0,0,0.375355559615893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,0.365921118388786,0,0,0.310983165046111,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0.383382679165211,0.492663237895943,0.088048434013226,1.65862492432618,1.8735593944205,4.29224273649692,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3326 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5258 | |||
|TSSclassifier=S | |||
|UniProt=P08238 | |||
|association_with_transcript=37bp_to_ENST00000371554_5end | |||
|description=CAGE_peak_16_at_HSP90AB1_5end | |||
|id=chr6:44215640..44215666,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.44e-14!45;CL:0002057!1.36e-13!42;CL:0000557!1.94e-11!71;CL:0000839!4.85e-11!70;CL:0002009!2.96e-09!65;CL:0000763!3.10e-09!112;CL:0000049!3.10e-09!112;CL:0002194!3.36e-09!63;CL:0000576!3.36e-09!63;CL:0000040!3.36e-09!63;CL:0000559!3.36e-09!63;CL:0000766!3.80e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-30;33!CL:0002057;1.13e-30;33!CL:0000473;6.92e-24;39!CL:0000234;6.92e-24;39!CL:0000576;1.44e-14;48!CL:0000097;1.08e-11;5!CL:0000766;1.16e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,6.50e-26,66;CL:0000860,8.27e-26,42;CL:0002057,8.27e-26,42;CL:0000557,1.78e-25,67;CL:0000766,1.79e-23,72;CL:0000473,3.15e-22,48;CL:0000234,3.15e-22,48;CL:0002194,7.50e-20,59;CL:0000576,7.50e-20,59;CL:0000040,7.50e-20,59;CL:0000559,7.50e-20,59;CL:0002009,4.12e-19,61;CL:0000763,3.10e-18,108;CL:0000049,3.10e-18,108;CL:0002031,1.13e-12,120;CL:0000097,6.95e-12,5;CL:0002028,6.95e-12,5;CL:0002032,6.46e-11,161;CL:0000837,6.46e-11,161;CL:0000988,8.69e-11,177;CL:0000738,9.27e-11,136;CL:0000037,2.71e-10,168;CL:0002087,8.38e-09,115;CL:0000163,8.49e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.77e-19;42!UBERON:0005754;2.49e-07;1!UBERON:0005425;2.49e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.49e-07;1!DOID:3165;2.49e-07;1!DOID:0060121;2.49e-07;1!DOID:2438;2.49e-07;1!DOID:4418;2.49e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.62e-07,1;DOID:3165,3.62e-07,1;DOID:0060121,3.62e-07,1;DOID:2438,3.62e-07,1;DOID:4418,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.13e-08!80;UBERON:0001474!1.27e-07!86;UBERON:0002390!8.40e-07!102;UBERON:0003061!8.40e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;7.99e-08;1!UBERON:0000998;2.49e-07;1!UBERON:0000941;2.49e-07;1!UBERON:0001785;2.49e-07;1!UBERON:0002464;2.49e-07;1!UBERON:0004904;2.49e-07;1!UBERON:0006868;2.49e-07;1!UBERON:0001021;2.49e-07;1!UBERON:0000473;2.74e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.65e-22,76;UBERON:0002390,1.08e-20,98;UBERON:0003061,1.08e-20,98;UBERON:0001474,3.42e-20,82;UBERON:0002405,1.18e-19,93;UBERON:0002193,2.07e-18,108;UBERON:0004765,4.37e-18,90;UBERON:0001434,6.36e-16,100;UBERON:0003081,4.90e-10,203;UBERON:0002204,4.24e-08,167;UBERON:0000996,7.50e-08,1;UBERON:0000941,2.35e-07,1;UBERON:0001785,2.35e-07,1;UBERON:0002464,2.35e-07,1;UBERON:0004904,2.35e-07,1;UBERON:0001021,2.35e-07,1;UBERON:0003902,2.35e-07,1;UBERON:0005425,2.35e-07,1;UBERON:0000473,3.00e-07,8;UBERON:0000998,3.01e-07,1;UBERON:0006868,3.01e-07,1;UBERON:0000926,3.83e-07,315;UBERON:0004120,3.83e-07,315;UBERON:0006603,3.83e-07,315 | |||
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| |||
|short_description=p16@HSP90AB1 | |||
}} |
Revision as of 21:10, 13 September 2013
Short description: | p16@HSP90AB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_HSP90AB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENST00000371554_5end |
EntrezGene: | HSP90AB1 |
HGNC: | 5258 |
UniProt: | P08238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 6.50e-26 | 66 |
classical monocyte | 8.27e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.27e-26 | 42 |
granulocyte monocyte progenitor cell | 1.78e-25 | 67 |
myeloid leukocyte | 1.79e-23 | 72 |
defensive cell | 3.15e-22 | 48 |
phagocyte | 3.15e-22 | 48 |
monopoietic cell | 7.50e-20 | 59 |
monocyte | 7.50e-20 | 59 |
monoblast | 7.50e-20 | 59 |
promonocyte | 7.50e-20 | 59 |
macrophage dendritic cell progenitor | 4.12e-19 | 61 |
myeloid cell | 3.10e-18 | 108 |
common myeloid progenitor | 3.10e-18 | 108 |
hematopoietic lineage restricted progenitor cell | 1.13e-12 | 120 |
mast cell | 6.95e-12 | 5 |
basophil mast progenitor cell | 6.95e-12 | 5 |
hematopoietic oligopotent progenitor cell | 6.46e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.46e-11 | 161 |
hematopoietic cell | 8.69e-11 | 177 |
leukocyte | 9.27e-11 | 136 |
hematopoietic stem cell | 2.71e-10 | 168 |
nongranular leukocyte | 8.38e-09 | 115 |
endocrine cell | 8.49e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.65e-22 | 76 |
hematopoietic system | 1.08e-20 | 98 |
blood island | 1.08e-20 | 98 |
bone element | 3.42e-20 | 82 |
immune system | 1.18e-19 | 93 |
hemolymphoid system | 2.07e-18 | 108 |
skeletal element | 4.37e-18 | 90 |
skeletal system | 6.36e-16 | 100 |
lateral plate mesoderm | 4.90e-10 | 203 |
musculoskeletal system | 4.24e-08 | 167 |
vagina | 7.50e-08 | 1 |
cranial nerve II | 2.35e-07 | 1 |
cranial nerve | 2.35e-07 | 1 |
nerve trunk | 2.35e-07 | 1 |
nerve connecting eye with brain | 2.35e-07 | 1 |
nerve | 2.35e-07 | 1 |
retinal neural layer | 2.35e-07 | 1 |
presumptive neural retina | 2.35e-07 | 1 |
testis | 3.00e-07 | 8 |
seminal vesicle | 3.01e-07 | 1 |
seminal fluid secreting gland | 3.01e-07 | 1 |
mesoderm | 3.83e-07 | 315 |
mesoderm-derived structure | 3.83e-07 | 315 |
presumptive mesoderm | 3.83e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.62e-07 | 1 |
skin benign neoplasm | 3.62e-07 | 1 |
integumentary system benign neoplasm | 3.62e-07 | 1 |
dermis tumor | 3.62e-07 | 1 |
cutaneous fibrous histiocytoma | 3.62e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.